For GO terms prediction, given the specific function prediction instruction and a protein sequence, models characterize the protein functions using the GO terms presented in three different domains (cellular component, biological process, and molecular function).
Galactica is a language model which uses a Transformer architecture in a decoder-only setup with the following modifications: - It uses GeLU activations on all model sizes - It uses a 2048 length context window for all model sizes - It does not use biases in any of the dense kernels or layer norms - It uses learned positional embeddings for the model - A vocabulary of 50k tokens was constructed using BPE. The vocabulary was generated from a randomly selected 2% subset of the training data