Accurate tumour segmentation is vital for various targeted diagnostic and therapeutic procedures for cancer, e.g., planning biopsies or tumour ablations. Manual delineation is extremely labour-intensive, requiring substantial expert time. Fully-supervised machine learning models aim to automate such localisation tasks, but require a large number of costly and often subjective 3D voxel-level labels for training. The high-variance and subjectivity in such labels impacts model generalisability, even when large datasets are available. Histopathology labels may offer more objective labels but the infeasibility of acquiring pixel-level annotations to develop tumour localisation methods based on histology remains challenging in-vivo. In this work, we propose a novel weakly-supervised semantic segmentation framework called SPARS (Self-Play Adversarial Reinforcement Learning for Segmentation), which utilises an object presence classifier, trained on a small number of image-level binary cancer presence labels, to localise cancerous regions on CT scans. Such binary labels of patient-level cancer presence can be sourced more feasibly from biopsies and histopathology reports, enabling a more objective cancer localisation on medical images. Evaluating with real patient data, we observed that SPARS yielded a mean dice score of $77.3 \pm 9.4$, which outperformed other weakly-supervised methods by large margins. This performance was comparable with recent fully-supervised methods that require voxel-level annotations. Our results demonstrate the potential of using SPARS to reduce the need for extensive human-annotated labels to detect cancer in real-world healthcare settings.
Weakly Supervised Semantic Segmentation (WSSS) with image-level labels aims to achieve pixel-level predictions using Class Activation Maps (CAMs). Recently, Contrastive Language-Image Pre-training (CLIP) has been introduced in WSSS. However, recent methods primarily focus on image-text alignment for CAM generation, while CLIP's potential in patch-text alignment remains unexplored. In this work, we propose ExCEL to explore CLIP's dense knowledge via a novel patch-text alignment paradigm for WSSS. Specifically, we propose Text Semantic Enrichment (TSE) and Visual Calibration (VC) modules to improve the dense alignment across both text and vision modalities. To make text embeddings semantically informative, our TSE module applies Large Language Models (LLMs) to build a dataset-wide knowledge base and enriches the text representations with an implicit attribute-hunting process. To mine fine-grained knowledge from visual features, our VC module first proposes Static Visual Calibration (SVC) to propagate fine-grained knowledge in a non-parametric manner. Then Learnable Visual Calibration (LVC) is further proposed to dynamically shift the frozen features towards distributions with diverse semantics. With these enhancements, ExCEL not only retains CLIP's training-free advantages but also significantly outperforms other state-of-the-art methods with much less training cost on PASCAL VOC and MS COCO.
Scribble-based weakly supervised semantic segmentation leverages only a few annotated pixels as labels to train a segmentation model, presenting significant potential for reducing the human labor involved in the annotation process. This approach faces two primary challenges: first, the sparsity of scribble annotations can lead to inconsistent predictions due to limited supervision; second, the variability in scribble annotations, reflecting differing human annotator preferences, can prevent the model from consistently capturing the discriminative regions of objects, potentially leading to unstable predictions. To address these issues, we propose a holistic framework, the class-driven scribble promotion network, for robust scribble-supervised semantic segmentation. This framework not only utilizes the provided scribble annotations but also leverages their associated class labels to generate reliable pseudo-labels. Within the network, we introduce a localization rectification module to mitigate noisy labels and a distance perception module to identify reliable regions surrounding scribble annotations and pseudo-labels. In addition, we introduce new large-scale benchmarks, ScribbleCOCO and ScribbleCityscapes, accompanied by a scribble simulation algorithm that enables evaluation across varying scribble styles. Our method demonstrates competitive performance in both accuracy and robustness, underscoring its superiority over existing approaches. The datasets and the codes will be made publicly available.
Weakly supervised semantic segmentation (WSSS) typically utilizes limited semantic annotations to obtain initial Class Activation Maps (CAMs). However, due to the inadequate coupling between class activation responses and semantic information in high-dimensional space, the CAM is prone to object co-occurrence or under-activation, resulting in inferior recognition accuracy. To tackle this issue, we propose DOEI, Dual Optimization of Embedding Information, a novel approach that reconstructs embedding representations through semantic-aware attention weight matrices to optimize the expression capability of embedding information. Specifically, DOEI amplifies tokens with high confidence and suppresses those with low confidence during the class-to-patch interaction. This alignment of activation responses with semantic information strengthens the propagation and decoupling of target features, enabling the generated embeddings to more accurately represent target features in high-level semantic space. In addition, we propose a hybrid-feature alignment module in DOEI that combines RGB values, embedding-guided features, and self-attention weights to increase the reliability of candidate tokens. Comprehensive experiments show that DOEI is an effective plug-and-play module that empowers state-of-the-art visual transformer-based WSSS models to significantly improve the quality of CAMs and segmentation performance on popular benchmarks, including PASCAL VOC (+3.6%, +1.5%, +1.2% mIoU) and MS COCO (+1.2%, +1.6% mIoU). Code will be available at https://github.com/AIGeeksGroup/DOEI.
With the rapid advancement of deep learning, computational pathology has made significant progress in cancer diagnosis and subtyping. Tissue segmentation is a core challenge, essential for prognosis and treatment decisions. Weakly supervised semantic segmentation (WSSS) reduces the annotation requirement by using image-level labels instead of pixel-level ones. However, Class Activation Map (CAM)-based methods still suffer from low spatial resolution and unclear boundaries. To address these issues, we propose a multi-level superpixel correction algorithm that refines CAM boundaries using superpixel clustering and floodfill. Experimental results show that our method achieves great performance on breast cancer segmentation dataset with mIoU of 71.08%, significantly improving tumor microenvironment boundary delineation.
Weakly-supervised semantic segmentation (WSSS) has achieved remarkable progress using only image-level labels. However, most existing WSSS methods focus on designing new network structures and loss functions to generate more accurate dense labels, overlooking the limitations imposed by fixed datasets, which can constrain performance improvements. We argue that more diverse trainable images provides WSSS richer information and help model understand more comprehensive semantic pattern. Therefore in this paper, we introduce a novel approach called Image Augmentation Agent (IAA) which shows that it is possible to enhance WSSS from data generation perspective. IAA mainly design an augmentation agent that leverages large language models (LLMs) and diffusion models to automatically generate additional images for WSSS. In practice, to address the instability in prompt generation by LLMs, we develop a prompt self-refinement mechanism. It allow LLMs to re-evaluate the rationality of generated prompts to produce more coherent prompts. Additionally, we insert an online filter into diffusion generation process to dynamically ensure the quality and balance of generated images. Experimental results show that our method significantly surpasses state-of-the-art WSSS approaches on the PASCAL VOC 2012 and MS COCO 2014 datasets.
Tissue semantic segmentation is one of the key tasks in computational pathology. To avoid the expensive and laborious acquisition of pixel-level annotations, a wide range of studies attempt to adopt the class activation map (CAM), a weakly-supervised learning scheme, to achieve pixel-level tissue segmentation. However, CAM-based methods are prone to suffer from under-activation and over-activation issues, leading to poor segmentation performance. To address this problem, we propose a novel weakly-supervised semantic segmentation framework for histopathological images based on image-mixing synthesis and consistency regularization, dubbed HisynSeg. Specifically, synthesized histopathological images with pixel-level masks are generated for fully-supervised model training, where two synthesis strategies are proposed based on Mosaic transformation and B\'ezier mask generation. Besides, an image filtering module is developed to guarantee the authenticity of the synthesized images. In order to further avoid the model overfitting to the occasional synthesis artifacts, we additionally propose a novel self-supervised consistency regularization, which enables the real images without segmentation masks to supervise the training of the segmentation model. By integrating the proposed techniques, the HisynSeg framework successfully transforms the weakly-supervised semantic segmentation problem into a fully-supervised one, greatly improving the segmentation accuracy. Experimental results on three datasets prove that the proposed method achieves a state-of-the-art performance. Code is available at https://github.com/Vison307/HisynSeg.
The application of Contrastive Language-Image Pre-training (CLIP) in Weakly Supervised Semantic Segmentation (WSSS) research powerful cross-modal semantic understanding capabilities. Existing methods attempt to optimize input text prompts for improved alignment of images and text, by finely adjusting text prototypes to facilitate semantic matching. Nevertheless, given the modality gap between text and vision spaces, the text prototypes employed by these methods have not effectively established a close correspondence with pixel-level vision features. In this work, our theoretical analysis indicates that the inherent modality gap results in misalignment of text and region features, and that this gap cannot be sufficiently reduced by minimizing contrast loss in CLIP. To mitigate the impact of the modality gap, we propose a Vision Prototype Learning (VPL) framework, by introducing more representative vision prototypes. The core of this framework is to learn class-specific vision prototypes in vision space with the help of text prototypes, for capturing high-quality localization maps. Moreover, we propose a regional semantic contrast module that contrasts regions embedding with corresponding prototypes, leading to more comprehensive and robust feature learning. Experimental results show that our proposed framework achieves state-of-the-art performance on two benchmark datasets.
Weakly Supervised Semantic Segmentation (WSSS), which leverages image-level labels, has garnered significant attention due to its cost-effectiveness. The previous methods mainly strengthen the inter-class differences to avoid class semantic ambiguity which may lead to erroneous activation. However, they overlook the positive function of some shared information between similar classes. Categories within the same cluster share some similar features. Allowing the model to recognize these features can further relieve the semantic ambiguity between these classes. To effectively identify and utilize this shared information, in this paper, we introduce a novel WSSS framework called Prompt Categories Clustering (PCC). Specifically, we explore the ability of Large Language Models (LLMs) to derive category clusters through prompts. These clusters effectively represent the intrinsic relationships between categories. By integrating this relational information into the training network, our model is able to better learn the hidden connections between categories. Experimental results demonstrate the effectiveness of our approach, showing its ability to enhance performance on the PASCAL VOC 2012 dataset and surpass existing state-of-the-art methods in WSSS.
Weakly Supervised Semantic Segmentation (WSSS) with image-level labels typically uses Class Activation Maps (CAM) to achieve dense predictions. Recently, Vision Transformer (ViT) has provided an alternative to generate localization maps from class-patch attention. However, due to insufficient constraints on modeling such attention, we observe that the Localization Attention Maps (LAM) often struggle with the artifact issue, i.e., patch regions with minimal semantic relevance are falsely activated by class tokens. In this work, we propose MoRe to address this issue and further explore the potential of LAM. Our findings suggest that imposing additional regularization on class-patch attention is necessary. To this end, we first view the attention as a novel directed graph and propose the Graph Category Representation module to implicitly regularize the interaction among class-patch entities. It ensures that class tokens dynamically condense the related patch information and suppress unrelated artifacts at a graph level. Second, motivated by the observation that CAM from classification weights maintains smooth localization of objects, we devise the Localization-informed Regularization module to explicitly regularize the class-patch attention. It directly mines the token relations from CAM and further supervises the consistency between class and patch tokens in a learnable manner. Extensive experiments are conducted on PASCAL VOC and MS COCO, validating that MoRe effectively addresses the artifact issue and achieves state-of-the-art performance, surpassing recent single-stage and even multi-stage methods. Code is available at https://github.com/zwyang6/MoRe.
Convolutions (Convs) and multi-head self-attentions (MHSAs) are typically considered alternatives to each other for building vision backbones. Although some works try to integrate both, they apply the two operators simultaneously at the finest pixel granularity. With Convs responsible for per-pixel feature extraction already, the question is whether we still need to include the heavy MHSAs at such a fine-grained level. In fact, this is the root cause of the scalability issue w.r.t. the input resolution for vision transformers. To address this important problem, we propose in this work to use MSHAs and Convs in parallel \textbf{at different granularity levels} instead. Specifically, in each layer, we use two different ways to represent an image: a fine-grained regular grid and a coarse-grained set of semantic slots. We apply different operations to these two representations: Convs to the grid for local features, and MHSAs to the slots for global features. A pair of fully differentiable soft clustering and dispatching modules is introduced to bridge the grid and set representations, thus enabling local-global fusion. Through extensive experiments on various vision tasks, we empirically verify the potential of the proposed integration scheme, named \textit{GLMix}: by offloading the burden of fine-grained features to light-weight Convs, it is sufficient to use MHSAs in a few (e.g., 64) semantic slots to match the performance of recent state-of-the-art backbones, while being more efficient. Our visualization results also demonstrate that the soft clustering module produces a meaningful semantic grouping effect with only IN1k classification supervision, which may induce better interpretability and inspire new weakly-supervised semantic segmentation approaches. Code will be available at \url{https://github.com/rayleizhu/GLMix}.
Accurate segmentation of Optical Coherence Tomography (OCT) images is crucial for diagnosing and monitoring retinal diseases. However, the labor-intensive nature of pixel-level annotation limits the scalability of supervised learning with large datasets. Weakly Supervised Semantic Segmentation (WSSS) provides a promising alternative by leveraging image-level labels. In this study, we propose a novel WSSS approach that integrates structural guidance with text-driven strategies to generate high-quality pseudo labels, significantly improving segmentation performance. In terms of visual information, our method employs two processing modules that exchange raw image features and structural features from OCT images, guiding the model to identify where lesions are likely to occur. In terms of textual information, we utilize large-scale pretrained models from cross-domain sources to implement label-informed textual guidance and synthetic descriptive integration with two textual processing modules that combine local semantic features with consistent synthetic descriptions. By fusing these visual and textual components within a multimodal framework, our approach enhances lesion localization accuracy. Experimental results on three OCT datasets demonstrate that our method achieves state-of-the-art performance, highlighting its potential to improve diagnostic accuracy and efficiency in medical imaging.
Fibrotic Lung Disease (FLD) is a severe condition marked by lung stiffening and scarring, leading to respiratory decline. High-resolution computed tomography (HRCT) is critical for diagnosing and monitoring FLD; however, fibrosis appears as irregular, diffuse patterns with unclear boundaries, leading to high inter-observer variability and time-intensive manual annotation. To tackle this challenge, we propose DiffSeg, a novel weakly supervised semantic segmentation (WSSS) method that uses image-level annotations to generate pixel-level fibrosis segmentation, reducing the need for fine-grained manual labeling. Additionally, our DiffSeg incorporates a diffusion-based generative model to synthesize HRCT images with different levels of fibrosis from healthy slices, enabling the generation of the fibrosis-injected slices and their paired fibrosis location. Experiments indicate that our method significantly improves the accuracy of pseudo masks generated by existing WSSS methods, greatly reducing the complexity of manual labeling and enhancing the consistency of the generated masks.
This work proposes a novel approach beyond supervised learning for effective pathological image analysis, addressing the challenge of limited robust labeled data. Pathological diagnosis of diseases like cancer has conventionally relied on the evaluation of morphological features by physicians and pathologists. However, recent advancements in compute-aided diagnosis (CAD) systems are gaining significant attention as diagnostic support tools. Although the advancement of deep learning has improved CAD significantly, segmentation models typically require large pixel-level annotated dataset, and such labeling is expensive. Existing studies not based on supervised approaches still struggle with limited generalization, and no practical approach has emerged yet. To address this issue, we present a weakly supervised semantic segmentation (WSSS) model by combining class activation map and Segment Anything Model (SAM)-based pseudo-labeling. For effective pretraining, we adopt the SAM-a foundation model that is pretrained on large datasets and operates in zero-shot configurations using only coarse prompts. The proposed approach transfer enhanced Attention Dropout Layer's knowledge to SAM, thereby generating pseudo-labels. To demonstrate the superiority of the proposed method, experimental studies are conducted on histopathological breast cancer datasets. The proposed method outperformed other WSSS methods across three datasets, demonstrating its efficiency by achieving this with only 12GB of GPU memory during training. Our code is available at : https://github.com/QI-NemoSong/EP-SAM
Weakly supervised semantic segmentation (WSSS) approaches typically rely on class activation maps (CAMs) for initial seed generation, which often fail to capture global context due to limited supervision from image-level labels. To address this issue, we introduce DALNet, Dense Alignment Learning Network that leverages text embeddings to enhance the comprehensive understanding and precise localization of objects across different levels of granularity. Our key insight is to employ a dual-level alignment strategy: (1) Global Implicit Alignment (GIA) to capture global semantics by maximizing the similarity between the class token and the corresponding text embeddings while minimizing the similarity with background embeddings, and (2) Local Explicit Alignment (LEA) to improve object localization by utilizing spatial information from patch tokens. Moreover, we propose a cross-contrastive learning approach that aligns foreground features between image and text modalities while separating them from the background, encouraging activation in missing regions and suppressing distractions. Through extensive experiments on the PASCAL VOC and MS COCO datasets, we demonstrate that DALNet significantly outperforms state-of-the-art WSSS methods. Our approach, in particular, allows for more efficient end-to-end process as a single-stage method.
Recent attention has been devoted to the pursuit of learning semantic segmentation models exclusively from image tags, a paradigm known as image-level Weakly Supervised Semantic Segmentation (WSSS). Existing attempts adopt the Class Activation Maps (CAMs) as priors to mine object regions yet observe the imbalanced activation issue, where only the most discriminative object parts are located. In this paper, we argue that the distribution discrepancy between the discriminative and the non-discriminative parts of objects prevents the model from producing complete and precise pseudo masks as ground truths. For this purpose, we propose a Pixel-Level Domain Adaptation (PLDA) method to encourage the model in learning pixel-wise domain-invariant features. Specifically, a multi-head domain classifier trained adversarially with the feature extraction is introduced to promote the emergence of pixel features that are invariant with respect to the shift between the source (i.e., the discriminative object parts) and the target (\textit{i.e.}, the non-discriminative object parts) domains. In addition, we come up with a Confident Pseudo-Supervision strategy to guarantee the discriminative ability of each pixel for the segmentation task, which serves as a complement to the intra-image domain adversarial training. Our method is conceptually simple, intuitive and can be easily integrated into existing WSSS methods. Taking several strong baseline models as instances, we experimentally demonstrate the effectiveness of our approach under a wide range of settings.
Event cameras excel in capturing high-contrast scenes and dynamic objects, offering a significant advantage over traditional frame-based cameras. Despite active research into leveraging event cameras for semantic segmentation, generating pixel-wise dense semantic maps for such challenging scenarios remains labor-intensive. As a remedy, we present EV-WSSS: a novel weakly supervised approach for event-based semantic segmentation that utilizes sparse point annotations. To fully leverage the temporal characteristics of event data, the proposed framework performs asymmetric dual-student learning between 1) the original forward event data and 2) the longer reversed event data, which contain complementary information from the past and the future, respectively. Besides, to mitigate the challenges posed by sparse supervision, we propose feature-level contrastive learning based on class-wise prototypes, carefully aggregated at both spatial region and sample levels. Additionally, we further excavate the potential of our dual-student learning model by exchanging prototypes between the two learning paths, thereby harnessing their complementary strengths. With extensive experiments on various datasets, including DSEC Night-Point with sparse point annotations newly provided by this paper, the proposed method achieves substantial segmentation results even without relying on pixel-level dense ground truths. The code and dataset are available at https://github.com/Chohoonhee/EV-WSSS.
In this paper, we propose 3DSS-VLG, a weakly supervised approach for 3D Semantic Segmentation with 2D Vision-Language Guidance, an alternative approach that a 3D model predicts dense-embedding for each point which is co-embedded with both the aligned image and text spaces from the 2D vision-language model. Specifically, our method exploits the superior generalization ability of the 2D vision-language models and proposes the Embeddings Soft-Guidance Stage to utilize it to implicitly align 3D embeddings and text embeddings. Moreover, we introduce the Embeddings Specialization Stage to purify the feature representation with the help of a given scene-level label, specifying a better feature supervised by the corresponding text embedding. Thus, the 3D model is able to gain informative supervisions both from the image embedding and text embedding, leading to competitive segmentation performances. To the best of our knowledge, this is the first work to investigate 3D weakly supervised semantic segmentation by using the textual semantic information of text category labels. Moreover, with extensive quantitative and qualitative experiments, we present that our 3DSS-VLG is able not only to achieve the state-of-the-art performance on both S3DIS and ScanNet datasets, but also to maintain strong generalization capability.
Weakly Supervised Semantic Segmentation (WSSS) using only image-level labels has gained significant attention due to its cost-effectiveness. The typical framework involves using image-level labels as training data to generate pixel-level pseudo-labels with refinements. Recently, methods based on Vision Transformers (ViT) have demonstrated superior capabilities in generating reliable pseudo-labels, particularly in recognizing complete object regions, compared to CNN methods. However, current ViT-based approaches have some limitations in the use of patch embeddings, being prone to being dominated by certain abnormal patches, as well as many multi-stage methods being time-consuming and lengthy in training, thus lacking efficiency. Therefore, in this paper, we introduce a novel ViT-based WSSS method named \textit{Adaptive Patch Contrast} (APC) that significantly enhances patch embedding learning for improved segmentation effectiveness. APC utilizes an Adaptive-K Pooling (AKP) layer to address the limitations of previous max pooling selection methods. Additionally, we propose a Patch Contrastive Learning (PCL) to enhance patch embeddings, thereby further improving the final results. Furthermore, we improve upon the existing multi-stage training framework without CAM by transforming it into an end-to-end single-stage training approach, thereby enhancing training efficiency. The experimental results show that our approach is effective and efficient, outperforming other state-of-the-art WSSS methods on the PASCAL VOC 2012 and MS COCO 2014 dataset within a shorter training duration.
Though adversarial erasing has prevailed in weakly supervised semantic segmentation to help activate integral object regions, existing approaches still suffer from the dilemma of under-activation and over-expansion due to the difficulty in determining when to stop erasing. In this paper, we propose a \textbf{K}nowledge \textbf{T}ransfer with \textbf{S}imulated Inter-Image \textbf{E}rasing (KTSE) approach for weakly supervised semantic segmentation to alleviate the above problem. In contrast to existing erasing-based methods that remove the discriminative part for more object discovery, we propose a simulated inter-image erasing scenario to weaken the original activation by introducing extra object information. Then, object knowledge is transferred from the anchor image to the consequent less activated localization map to strengthen network localization ability. Considering the adopted bidirectional alignment will also weaken the anchor image activation if appropriate constraints are missing, we propose a self-supervised regularization module to maintain the reliable activation in discriminative regions and improve the inter-class object boundary recognition for complex images with multiple categories of objects. In addition, we resort to intra-image erasing and propose a multi-granularity alignment module to gently enlarge the object activation to boost the object knowledge transfer. Extensive experiments and ablation studies on PASCAL VOC 2012 and COCO datasets demonstrate the superiority of our proposed approach. Source codes and models are available at https://github.com/NUST-Machine-Intelligence-Laboratory/KTSE.