We study image segmentation in the biological domain, particularly trait and part segmentation from specimen images (e.g., butterfly wing stripes or beetle body parts). This is a crucial, fine-grained task that aids in understanding the biology of organisms. The conventional approach involves hand-labeling masks, often for hundreds of images per species, and training a segmentation model to generalize these labels to other images, which can be exceedingly laborious. We present a label-efficient method named Static Segmentation by Tracking (SST). SST is built upon the insight: while specimens of the same species have inherent variations, the traits and parts we aim to segment show up consistently. This motivates us to concatenate specimen images into a ``pseudo-video'' and reframe trait and part segmentation as a tracking problem. Concretely, SST generates masks for unlabeled images by propagating annotated or predicted masks from the ``pseudo-preceding'' images. Powered by Segment Anything Model 2 (SAM~2) initially developed for video segmentation, we show that SST can achieve high-quality trait and part segmentation with merely one labeled image per species -- a breakthrough for analyzing specimen images. We further develop a cycle-consistent loss to fine-tune the model, again using one labeled image. Additionally, we highlight the broader potential of SST, including one-shot instance segmentation on images taken in the wild and trait-based image retrieval.
In this work, we tackle one-shot visual search of object parts. Given a single reference image of an object with annotated affordance regions, we segment semantically corresponding parts within a target scene. We propose AffCorrs, an unsupervised model that combines the properties of pre-trained DINO-ViT's image descriptors and cyclic correspondences. We use AffCorrs to find corresponding affordances both for intra- and inter-class one-shot part segmentation. This task is more difficult than supervised alternatives, but enables future work such as learning affordances via imitation and assisted teleoperation.
We tackle the problem of one-shot instance segmentation: Given an example image of a novel, previously unknown object category, find and segment all objects of this category within a complex scene. To address this challenging new task, we propose Siamese Mask R-CNN. It extends Mask R-CNN by a Siamese backbone encoding both reference image and scene, allowing it to target detection and segmentation towards the reference category. We demonstrate empirical results on MS Coco highlighting challenges of the one-shot setting: while transferring knowledge about instance segmentation to novel object categories works very well, targeting the detection network towards the reference category appears to be more difficult. Our work provides a first strong baseline for one-shot instance segmentation and will hopefully inspire further research into more powerful and flexible scene analysis algorithms. Code is available at: https://github.com/bethgelab/siamese-mask-rcnn