The commercial vitality of community-scale streets in Chinese cities is shaped by complex interactions between vehicular accessibility, environmental quality, and pedestrian perception. This study proposes an interpretable, image-based framework to examine how street-level features -- including parked vehicle density, greenery, cleanliness, and street width -- impact retail performance and user satisfaction in Harbin, China. Leveraging street view imagery and a multimodal large language model (VisualGLM-6B), we construct a Community Commercial Vitality Index (CCVI) from Meituan and Dianping data and analyze its relationship with spatial attributes extracted via GPT-4-based perception modeling. Our findings reveal that while moderate vehicle presence may enhance commercial access, excessive on-street parking -- especially in narrow streets -- erodes walkability and reduces both satisfaction and shop-level pricing. In contrast, streets with higher perceived greenery and cleanliness show significantly greater satisfaction scores but only weak associations with pricing. Street width moderates the effects of vehicle presence, underscoring the importance of spatial configuration. These results demonstrate the value of integrating AI-assisted perception with urban morphological analysis to capture non-linear and context-sensitive drivers of commercial success. This study advances both theoretical and methodological frontiers by highlighting the conditional role of vehicle activity in neighborhood commerce and demonstrating the feasibility of multimodal AI for perceptual urban diagnostics. The implications extend to urban design, parking management, and scalable planning tools for community revitalization.
After developing a computational system for morphological analysis of the Mapuche language, and evaluating it with texts from various authors and styles, it became necessary to verify the linguistic assumptions of the source used as the basis for implementing this tool. In the present work, the primary focus is on the lexical category classification of Mapud\"ungun roots recognised as verbal in the source utilised for the development of the morphological analysis system. The results of this lexical category revision directly benefit the computational analyser, as they are implemented as soon as they are verified. Additionally, it is hoped that these results will help clarify some uncertainties about lexical categories in the Mapuche language. This work addresses a preliminary task to identify the valency of true verbal roots, the results of which will be presented in a subsequent work that complements this article.
Tokenization is a fundamental preprocessing step in NLP, directly impacting large language models' (LLMs) ability to capture syntactic, morphosyntactic, and semantic structures. This paper introduces a novel framework for systematically evaluating tokenization strategies, addressing challenges in morphologically rich and low-resource languages. Using a Turkish dataset of 6,200 multiple-choice questions from the Massive Multitask Language Understanding (MMLU) benchmark, the framework assesses tokenizers across five key metrics: vocabulary size, token count, processing time, language-specific token percentages (\%TR), and token purity. These metrics provide a structured approach to evaluating how well tokenizers preserve linguistic structures. While \%TR measures the proportion of valid words in the target language, \%Pure assesses the alignment of tokens with meaningful linguistic units, such as roots and valid morphemes, minimizing semantic fragmentation. The findings reveal that \%TR, introduced as a critical metric, exhibits a stronger correlation with downstream performance (e.g., MMLU scores) than token purity, emphasizing its role in improving model accuracy. Additionally, larger model parameters do not necessarily yield better tokenization quality or enhanced results, highlighting the importance of tailored tokenization strategies that prioritize linguistic alignment. This framework sets a new standard for developing robust tokenization methods optimized for morphologically complex and low-resource languages. Future work will refine morphological analysis, explore domain-specific customizations, and conduct cross-linguistic evaluations to further enhance tokenization practices.
Recent advancements in computational pathology have produced patch-level Multi-modal Large Language Models (MLLMs), but these models are limited by their inability to analyze whole slide images (WSIs) comprehensively and their tendency to bypass crucial morphological features that pathologists rely on for diagnosis. To address these challenges, we first introduce WSI-Bench, a large-scale morphology-aware benchmark containing 180k VQA pairs from 9,850 WSIs across 30 cancer types, designed to evaluate MLLMs' understanding of morphological characteristics crucial for accurate diagnosis. Building upon this benchmark, we present WSI-LLaVA, a novel framework for gigapixel WSI understanding that employs a three-stage training approach: WSI-text alignment, feature space alignment, and task-specific instruction tuning. To better assess model performance in pathological contexts, we develop two specialized WSI metrics: WSI-Precision and WSI-Relevance. Experimental results demonstrate that WSI-LLaVA outperforms existing models across all capability dimensions, with a significant improvement in morphological analysis, establishing a clear correlation between morphological understanding and diagnostic accuracy.
This study presents the development of a part-of-speech (POS) tagging model to extract the skeletal structure of sentences using transfer learning with the BERT architecture for token classification. The model, fine-tuned on Russian text, demonstrating its effectiveness. The approach offers potential applications in enhancing natural language processing tasks, such as improving machine translation. Keywords: part of speech tagging, morphological analysis, natural language processing, BERT.
We address the challenge of automated classification of diffuse large B-cell lymphoma (DLBCL) into its two primary subtypes: activated B-cell-like (ABC) and germinal center B-cell-like (GCB). Accurate classification between these subtypes is essential for determining the appropriate therapeutic strategy, given their distinct molecular profiles and treatment responses. Our proposed deep learning model demonstrates robust performance, achieving an average area under the curve (AUC) of (87.4 pm 5.7)\% during cross-validation. It shows a high positive predictive value (PPV), highlighting its potential for clinical application, such as triaging for molecular testing. To gain biological insights, we performed an analysis of morphological features of ABC and GCB subtypes. We segmented cell nuclei using a pre-trained deep neural network and compared the statistics of geometric and color features for ABC and GCB. We found that the distributions of these features were not very different for the two subtypes, which suggests that the visual differences between them are more subtle. These results underscore the potential of our method to assist in more precise subtype classification and can contribute to improved treatment management and outcomes for patients of DLBCL.
Landmark digitization is essential in geometric morphometrics, enabling the quantification of biological shapes, such as facial structures, for in-depth morphological analysis. Traditional landmarking, which identifies specific anatomical points, can be complemented by semilandmarks when precise locations are challenging to define. However, manual placement of numerous landmarks is time-consuming and prone to human error, leading to inconsistencies across studies. To address this, we introduce FaceDig, an AI-powered tool designed to automate landmark placement with human-level precision, focusing on anatomically sound facial points. FaceDig is open-source and integrates seamlessly with analytical platforms like R and Python. It was trained using one of the largest and most ethnically diverse face datasets, applying a landmark configuration optimized for 2D enface photographs. Our results demonstrate that FaceDig provides reliable landmark coordinates, comparable to those placed manually by experts. The tool's output is compatible with the widely-used TpsDig2 software, facilitating adoption and ensuring consistency across studies. Users are advised to work with standardized facial images and visually inspect the results for potential corrections. Despite the growing preference for 3D morphometrics, 2D facial photographs remain valuable due to their cultural and practical significance. Future enhancements to FaceDig will include support for profile views, further expanding its utility. By offering a standardized approach to landmark placement, FaceDig promotes reproducibility in facial morphology research and provides a robust alternative to existing 2D tools.
Advanced image segmentation and processing tools present an opportunity to study cell processes and their dynamics. However, image analysis is often routine and time-consuming. Nowadays, alternative data-driven approaches using deep learning are potentially offering automatized, accurate, and fast image analysis. In this paper, we extend the applications of Cellpose, a state-of-the-art cell segmentation framework, with feature extraction capabilities to assess morphological characteristics. We also introduce a dataset of DAPI and FITC stained cells to which our new method is applied.
Numerous studies have highlighted that atypical brain development, particularly during infancy and toddlerhood, is linked to an increased likelihood of being diagnosed with a neurodevelopmental condition, such as autism. Accurate brain tissue segmentations for morphological analysis are essential in numerous infant studies. However, due to ongoing white matter (WM) myelination changing tissue contrast in T1- and T2-weighted images, automatic tissue segmentation in 6-month infants is particularly difficult. On the other hand, manual labelling by experts is time-consuming and labor-intensive. In this study, we propose the first 8-tissue segmentation pipeline for six-month-old infant brains. This pipeline utilizes domain adaptation (DA) techniques to leverage our longitudinal data, including neonatal images segmented with the neonatal Developing Human Connectome Project structural pipeline. Our pipeline takes raw 6-month images as inputs and generates the 8-tissue segmentation as outputs, forming an end-to-end segmentation pipeline. The segmented tissues include WM, gray matter (GM), cerebrospinal fluid (CSF), ventricles, cerebellum, basal ganglia, brainstem, and hippocampus/amygdala. Cycle-Consistent Generative Adversarial Network (CycleGAN) and Attention U-Net were employed to achieve the image contrast transformation between neonatal and 6-month images and perform tissue segmentation on the synthesized 6-month images (neonatal images with 6-month intensity contrast), respectively. Moreover, we incorporated the segmentation outputs from Infant Brain Extraction and Analysis Toolbox (iBEAT) and another Attention U-Net to further enhance the performance and construct the end-to-end segmentation pipeline. Our evaluation with real 6-month images achieved a DICE score of 0.92, an HD95 of 1.6, and an ASSD of 0.42.
Deep learning still struggles with certain kinds of scientific data. Notably, pretraining data may not provide coverage of relevant distribution shifts (e.g., shifts induced via the use of different measurement instruments). We consider deep learning models trained to classify the synthesis conditions of uranium ore concentrates (UOCs) and show that model editing is particularly effective for improving generalization to distribution shifts common in this domain. In particular, model editing outperforms finetuning on two curated datasets comprising of micrographs taken of U$_{3}$O$_{8}$ aged in humidity chambers and micrographs acquired with different scanning electron microscopes, respectively.
Rule-based language processing systems have been overshadowed by neural systems in terms of utility, but it remains unclear whether neural NLP systems, in practice, learn the grammar rules that humans use. This work aims to shed light on the issue by evaluating state-of-the-art LLMs in a task of morphological analysis of complex Finnish noun forms. We generate the forms using an FST tool, and they are unlikely to have occurred in the training sets of the LLMs, therefore requiring morphological generalisation capacity. We find that GPT-4-turbo has some difficulties in the task while GPT-3.5-turbo struggles and smaller models Llama2-70B and Poro-34B fail nearly completely.
Herein, we present CoDA, the Coral Dendroid structure Analyzer, a visual analytics suite that allows for the first time to investigate the ontogenetic morphological development of complex dendroid coral colonies, exemplified on three important framework-forming dendroid cold-water corals: Lophelia pertusa (Linnaeus, 1758), Madrepora oculata (Linnaeus, 1758), and Goniocorella dumosa (Alcock, 1902). Input to CoDA is an initial instance segmentation of the coral polyp cavities (calices), from which it estimates the skeleton tree of the colony and extracts classical morphological measurements and advanced shape features of the individual corallites. CoDA also works as a proofreading and error correction tool by helping to identify wrong parts in the skeleton tree and providing tools to quickly correct these errors. The final skeleton tree enables the derivation of additional information about the calices/corallite instances that otherwise could not be obtained, including their ontogenetic generation and branching patterns - the basis of a fully quantitative statistical analysis of the coral colony morphology. Part of CoDA is CoDAGraph, a feature-rich link-and-brush user interface for visualizing the extracted features and 2D graph layouts of the skeleton tree, enabling the real-time exploration of complex coral colonies and their building blocks, the individual corallites and branches. In the future, we expect CoDA to greatly facilitate the analysis of large stony corals of different species and morphotypes, as well as other dendroid structures, enabling new insights into the influence of genetic and environmental factors on their ontogenetic morphological development.
We present three innovations in tokenization and subword segmentation. First, we propose to use unsupervised morphological analysis with Morfessor as pre-tokenization. Second, we present an algebraic method for obtaining subword embeddings grounded in a word embedding space. Based on that, we design a novel subword segmentation algorithm that uses the embeddings, ensuring that the procedure considers lexical meaning. Third, we introduce an efficient segmentation algorithm based on a subword bigram model that can be initialized with the lexically aware segmentation method to avoid using Morfessor and large embedding tables at inference time. We evaluate the proposed approaches using two intrinsic metrics and measure their performance on two downstream tasks: part-of-speech tagging and machine translation. Our experiments show significant improvements in the morphological plausibility of the segmentation when evaluated using segmentation precision on morpheme boundaries and improved R\'enyi efficiency in 8 languages. Although the proposed tokenization methods do not have a large impact on automatic translation quality, we observe consistent performance gains in the arguably more morphological task of part-of-speech tagging.
The ability of three-dimensional (3D) spheroid modeling to study the invasive behavior of breast cancer cells has drawn increased attention. The deep learning-based image processing framework is very effective at speeding up the cell morphological analysis process. Out-of-focus photos taken while capturing 3D cells under several z-slices, however, could negatively impact the deep learning model. In this work, we created a new algorithm to handle blurry images while preserving the stacked image quality. Furthermore, we proposed a unique training architecture that leverages consistency training to help reduce the bias of the model when dense-slice stacking is applied. Additionally, the model's stability is increased under the sparse-slice stacking effect by utilizing the self-training approach. The new blurring stacking technique and training flow are combined with the suggested architecture and self-training mechanism to provide an innovative yet easy-to-use framework. Our methods produced noteworthy experimental outcomes in terms of both quantitative and qualitative aspects.
As Uzbek language is agglutinative, has many morphological features which words formed by combining root and affixes. Affixes play an important role in the morphological analysis of words, by adding additional meanings and grammatical functions to words. Inflectional endings are utilized to express various morphological features within the language. This feature introduces numerous possibilities for word endings, thereby significantly expanding the word vocabulary and exacerbating issues related to data sparsity in statistical models. This paper present modeling of the morphological analysis of Uzbek words, including stemming, lemmatizing, and the extraction of morphological information while considering morpho-phonetic exceptions. Main steps of the model involve developing a complete set of word-ending with assigned morphological information, and additional datasets for morphological analysis. The proposed model was evaluated using a curated test set comprising 5.3K words. Through manual verification of stemming, lemmatizing, and morphological feature corrections carried out by linguistic specialists, it obtained a word-level accuracy of over 91%. The developed tool based on the proposed model is available as a web-based application and an open-source Python library.
This study evaluates three different lemmatization approaches to Estonian -- Generative character-level models, Pattern-based word-level classification models, and rule-based morphological analysis. According to our experiments, a significantly smaller Generative model consistently outperforms the Pattern-based classification model based on EstBERT. Additionally, we observe a relatively small overlap in errors made by all three models, indicating that an ensemble of different approaches could lead to improvements.
Recent advances in deep learning have greatly facilitated the automated segmentation of ultrasound images, which is essential for nodule morphological analysis. Nevertheless, most existing methods depend on extensive and precise annotations by domain experts, which are labor-intensive and time-consuming. In this study, we suggest using simple aspect ratio annotations directly from ultrasound clinical diagnoses for automated nodule segmentation. Especially, an asymmetric learning framework is developed by extending the aspect ratio annotations with two types of pseudo labels, i.e., conservative labels and radical labels, to train two asymmetric segmentation networks simultaneously. Subsequently, a conservative-radical-balance strategy (CRBS) strategy is proposed to complementally combine radical and conservative labels. An inconsistency-aware dynamically mixed pseudo-labels supervision (IDMPS) module is introduced to address the challenges of over-segmentation and under-segmentation caused by the two types of labels. To further leverage the spatial prior knowledge provided by clinical annotations, we also present a novel loss function namely the clinical anatomy prior loss. Extensive experiments on two clinically collected ultrasound datasets (thyroid and breast) demonstrate the superior performance of our proposed method, which can achieve comparable and even better performance than fully supervised methods using ground truth annotations.
Considering the variability of amplitude and phase patterns in electrocardiogram (ECG) signals due to cardiac activity and individual differences, existing entropy-based studies have not fully utilized these two patterns and lack integration. To address this gap, this paper proposes a novel fusion entropy metric, morphological ECG entropy (MEE) for the first time, specifically designed for ECG morphology, to comprehensively describe the fusion of amplitude and phase patterns. MEE is computed based on beat-level samples, enabling detailed analysis of each cardiac cycle. Experimental results demonstrate that MEE achieves rapid, accurate, and label-free localization of abnormal ECG arrhythmia regions. Furthermore, MEE provides a method for assessing sample diversity, facilitating compression of imbalanced training sets (via representative sample selection), and outperforms random pruning. Additionally, MEE exhibits the ability to describe areas of poor quality. By discussing, it proves the robustness of MEE value calculation to noise interference and its low computational complexity. Finally, we integrate this method into a clinical interactive interface to provide a more convenient and intuitive user experience. These findings indicate that MEE serves as a valuable clinical descriptor for ECG characterization. The implementation code can be referenced at the following link: https://github.com/fdu-harry/ECG-MEE-metric.
We present LatinPipe, the winning submission to the EvaLatin 2024 Dependency Parsing shared task. Our system consists of a fine-tuned concatenation of base and large pre-trained LMs, with a dot-product attention head for parsing and softmax classification heads for morphology to jointly learn both dependency parsing and morphological analysis. It is trained by sampling from seven publicly available Latin corpora, utilizing additional harmonization of annotations to achieve a more unified annotation style. Before fine-tuning, we train the system for a few initial epochs with frozen weights. We also add additional local relative contextualization by stacking the BiLSTM layers on top of the Transformer(s). Finally, we ensemble output probability distributions from seven randomly instantiated networks for the final submission. The code is available at https://github.com/ufal/evalatin2024-latinpipe.
Various ideation methods, such as morphological analysis and design-by-analogy, have been developed to aid creative problem-solving and innovation. Among them, the Theory of Inventive Problem Solving (TRIZ) stands out as one of the best-known methods. However, the complexity of TRIZ and its reliance on users' knowledge, experience, and reasoning capabilities limit its practicality. To address this, we introduce AutoTRIZ, an artificial ideation system that integrates Large Language Models (LLMs) to automate and enhance the TRIZ methodology. By leveraging LLMs' vast pre-trained knowledge and advanced reasoning capabilities, AutoTRIZ offers a novel, generative, and interpretable approach to engineering innovation. AutoTRIZ takes a problem statement from the user as its initial input, automatically conduct the TRIZ reasoning process and generates a structured solution report. We demonstrate and evaluate the effectiveness of AutoTRIZ through comparative experiments with textbook cases and a real-world application in the design of a Battery Thermal Management System (BTMS). Moreover, the proposed LLM-based framework holds the potential for extension to automate other knowledge-based ideation methods, such as SCAMPER, Design Heuristics, and Design-by-Analogy, paving the way for a new era of AI-driven innovation tools.