The integration of large language models (LLMs) into electronic design automation (EDA) has significantly advanced the field, offering transformative benefits, particularly in register transfer level (RTL) code generation and understanding. While previous studies have demonstrated the efficacy of fine-tuning LLMs for these generation-based tasks, embedding-based tasks, which are equally critical to EDA workflows, have been largely overlooked. These tasks, including natural language code search, RTL code functionality equivalence checking, and performance prediction, are essential for accelerating and optimizing the hardware design process. To address this gap, we present DeepRTL2, a family of versatile LLMs that unifies both generation- and embedding-based tasks related to RTL. By simultaneously tackling a broad range of tasks, DeepRTL2 represents the first model to provide a comprehensive solution to the diverse challenges in EDA. Through extensive experiments, we show that DeepRTL2 achieves state-of-the-art performance across all evaluated tasks.
In the pursuit of enhancing software reusability and developer productivity, code search has emerged as a key area, aimed at retrieving code snippets relevant to functionalities based on natural language queries. Despite significant progress in self-supervised code pre-training utilizing the vast amount of code data in repositories, existing methods have primarily focused on leveraging contrastive learning to align natural language with function-level code snippets. These studies have overlooked the abundance of fine-grained (such as block-level and statement-level) code snippets prevalent within the function-level code snippets, which results in suboptimal performance across all levels of granularity. To address this problem, we first construct a multi-granularity code search dataset called MGCodeSearchNet, which contains 536K+ pairs of natural language and code snippets. Subsequently, we introduce a novel Multi-Granularity Self-Supervised contrastive learning code Search framework (MGS$^{3}$}). First, MGS$^{3}$ features a Hierarchical Multi-Granularity Representation module (HMGR), which leverages syntactic structural relationships for hierarchical representation and aggregates fine-grained information into coarser-grained representations. Then, during the contrastive learning phase, we endeavor to construct positive samples of the same granularity for fine-grained code, and introduce in-function negative samples for fine-grained code. Finally, we conduct extensive experiments on code search benchmarks across various granularities, demonstrating that the framework exhibits outstanding performance in code search tasks of multiple granularities. These experiments also showcase its model-agnostic nature and compatibility with existing pre-trained code representation models.
Large Language Models for code often entail significant computational complexity, which grows significantly with the length of the input code sequence. We propose LeanCode for code simplification to reduce training and prediction time, leveraging code contexts in utilizing attention scores to represent the tokens' importance. We advocate for the selective removal of tokens based on the average context-aware attention scores rather than average scores across all inputs. LeanCode uses the attention scores of `CLS' tokens within the encoder for classification tasks, such as code search. It also employs the encoder-decoder attention scores to determine token significance for sequence-to-sequence tasks like code summarization. Our evaluation shows LeanCode's superiority over the SOTAs DietCode and Slimcode, with improvements of 60% and 16% for code search, and 29% and 27% for code summarization, respectively.
Recent advancements in Large Language Models (LLMs) have transformed code generation from natural language queries. However, despite their extensive knowledge and ability to produce high-quality code, LLMs often struggle with contextual accuracy, particularly in evolving codebases. Current code search and retrieval methods frequently lack robustness in both the quality and contextual relevance of retrieved results, leading to suboptimal code generation. This paper introduces a novel knowledge graph-based approach to improve code search and retrieval leading to better quality of code generation in the context of repository-level tasks. The proposed approach represents code repositories as graphs, capturing structural and relational information for enhanced context-aware code generation. Our framework employs a hybrid approach for code retrieval to improve contextual relevance, track inter-file modular dependencies, generate more robust code and ensure consistency with the existing codebase. We benchmark the proposed approach on the Evolutionary Code Benchmark (EvoCodeBench) dataset, a repository-level code generation benchmark, and demonstrate that our method significantly outperforms the baseline approach. These findings suggest that knowledge graph based code generation could advance robust, context-sensitive coding assistance tools.
Understanding source code is a topic of great interest in the software engineering community, since it can help programmers in various tasks such as software maintenance and reuse. Recent advances in large language models (LLMs) have demonstrated remarkable program comprehension capabilities, while transformer-based topic modeling techniques offer effective ways to extract semantic information from text. This paper proposes and explores a novel approach that combines these strengths to automatically identify meaningful topics in a corpus of Python programs. Our method consists in applying topic modeling on the descriptions obtained by asking an LLM to summarize the code. To assess the internal consistency of the extracted topics, we compare them against topics inferred from function names alone, and those derived from existing docstrings. Experimental results suggest that leveraging LLM-generated summaries provides interpretable and semantically rich representation of code structure. The promising results suggest that our approach can be fruitfully applied in various software engineering tasks such as automatic documentation and tagging, code search, software reorganization and knowledge discovery in large repositories.
Pre-trained code models rely heavily on high-quality pre-training data, particularly human-written reference comments that bridge code and natural language. However, these comments often become outdated as software evolves, degrading model performance. Large language models (LLMs) excel at generating high-quality code comments. We investigate whether replacing human-written comments with LLM-generated ones improves pre-training datasets. Since standard metrics cannot assess reference comment quality, we propose two novel reference-free evaluation tasks: code-comment inconsistency detection and semantic code search. Results show that LLM-generated comments are more semantically consistent with code than human-written ones, as confirmed by manual evaluation. Leveraging this finding, we rebuild the CodeSearchNet dataset with LLM-generated comments and re-pre-train CodeT5. Evaluations demonstrate that models trained on LLM-enhanced data outperform those using original human comments in code summarization, generation, and translation tasks. This work validates rebuilding pre-training datasets with LLMs to advance code intelligence, challenging the traditional reliance on human reference comments.
Various deep learning (DL) methods have recently been utilized to detect software vulnerabilities. Real-world software vulnerability datasets are rare and hard to acquire, as there is no simple metric for classifying vulnerability. Such datasets are heavily imbalanced, and none of the current datasets are considered huge for DL models. To tackle these problems, a recent work has tried to augment the dataset using the source code and generate realistic single-statement vulnerabilities, which is not quite practical and requires manual checking of the generated vulnerabilities. In this paper, we aim to explore the augmentation of vulnerabilities at the representation level to help current models learn better, which has never been done before to the best of our knowledge. We implement and evaluate five augmentation techniques that augment the embedding of the data and have recently been used for code search, which is a completely different software engineering task. We also introduced a conditioned version of those augmentation methods, which ensures the augmentation does not change the vulnerable section of the vector representation. We show that such augmentation methods can be helpful and increase the F1-score by up to 9.67%, yet they cannot beat Random Oversampling when balancing datasets, which increases the F1-score by 10.82%.
Code search aims to retrieve semantically relevant code snippets for natural language queries. While pre-trained language models (PLMs) have shown remarkable performance in this task, they struggle in cross-domain scenarios, often requiring costly fine-tuning or facing performance drops in zero-shot settings. RAPID, which generates synthetic data for model fine-tuning, is currently the only effective method for zero-shot cross-domain code search. Despite its effectiveness, RAPID demands substantial computational resources for fine-tuning and needs to maintain specialized models for each domain, underscoring the need for a zero-shot, fine-tuning-free approach for cross-domain code search. The key to tackling zero-shot cross-domain code search lies in bridging the gaps among domains. In this work, we propose to break the query-code matching process of code search into two simpler tasks: query-comment matching and code-code matching. Our empirical study reveals the strong complementarity among the three matching schemas in zero-shot cross-domain settings, i.e., query-code, query-comment, and code-code matching. Based on the findings, we propose CodeBridge, a zero-shot, fine-tuning-free approach for cross-domain code search. Specifically, CodeBridge uses Large Language Models (LLMs) to generate comments and pseudo-code, then combines query-code, query-comment, and code-code matching via PLM-based similarity scoring and sampling-based fusion. Experimental results show that our approach outperforms the state-of-the-art PLM-based code search approaches, i.e., CoCoSoDa and UniXcoder, by an average of 21.4% and 24.9% in MRR, respectively, across three datasets. Our approach also yields results that are better than or comparable to those of the zero-shot cross-domain code search approach RAPID, which requires costly fine-tuning.
Code embeddings capture the semantic representations of code and are crucial for various code-related large language model (LLM) applications, such as code search. Previous training primarily relies on optimizing the InfoNCE loss by comparing positive natural language (NL)-code pairs with in-batch negatives. However, due to the sparse nature of code contexts, training solely by comparing the major differences between positive and negative pairs may fail to capture deeper semantic nuances. To address this issue, we propose a novel order-augmented strategy for improved code search (OASIS). It leverages order-based similarity labels to train models to capture subtle differences in similarity among negative pairs. Extensive benchmark evaluations demonstrate that our OASIS model significantly outperforms previous state-of-the-art models focusing solely on major positive-negative differences. It underscores the value of exploiting subtle differences among negative pairs with order labels for effective code embedding training.
Code embeddings are essential for semantic code search; however, current approaches often struggle to capture the precise syntactic and contextual nuances inherent in code. Open-source models such as CodeBERT and UniXcoder exhibit limitations in scalability and efficiency, while high-performing proprietary systems impose substantial computational costs. We introduce a parameter-efficient fine-tuning method based on Low-Rank Adaptation (LoRA) to construct task-specific adapters for code retrieval. Our approach reduces the number of trainable parameters to less than two percent of the base model, enabling rapid fine-tuning on extensive code corpora (2 million samples in 25 minutes on two H100 GPUs). Experiments demonstrate an increase of up to 9.1% in Mean Reciprocal Rank (MRR) for Code2Code search, and up to 86.69% for Text2Code search tasks across multiple programming languages. Distinction in task-wise and language-wise adaptation helps explore the sensitivity of code retrieval for syntactical and linguistic variations. To foster research in this area, we make our code and pre-trained models publicly available.
Deploying language models often requires navigating accuracy vs. performance trade-offs to meet latency constraints while preserving utility. Traditional model distillation reduces size but incurs substantial costs through training separate models. We introduce ModularStarEncoder (MoSE), a 1-billion-parameter multi-exit encoder for code retrieval and classification that employs a novel Self-Distillation mechanism. This approach significantly enhances lower-layer representations, enabling flexible deployment of different model portions with favorable performance trade-offs. Our architecture improves text-to-code and code-to-code search by targeting specific encoder layers as exit heads, where higher layers guide earlier ones during training-improving intermediate representations at minimal additional cost. We further enhance MoSE with a repository-level contextual loss that maximizes training context window utilization. Additionally, we release a new dataset created through code translation that extends text-to-code benchmarks with cross-language code-to-code pairs. Evaluations demonstrate the effectiveness of Self-Distillation as a principled approach to trading inference cost for accuracy across various code understanding tasks.
The increasing adoption of large language models (LLMs) for code-related tasks has raised concerns about the security of their training datasets. One critical threat is dead code poisoning, where syntactically valid but functionally redundant code is injected into training data to manipulate model behavior. Such attacks can degrade the performance of neural code search systems, leading to biased or insecure code suggestions. Existing detection methods, such as token-level perplexity analysis, fail to effectively identify dead code due to the structural and contextual characteristics of programming languages. In this paper, we propose DePA (Dead Code Perplexity Analysis), a novel line-level detection and cleansing method tailored to the structural properties of code. DePA computes line-level perplexity by leveraging the contextual relationships between code lines and identifies anomalous lines by comparing their perplexity to the overall distribution within the file. Our experiments on benchmark datasets demonstrate that DePA significantly outperforms existing methods, achieving 0.14-0.19 improvement in detection F1-score and a 44-65% increase in poisoned segment localization precision. Furthermore, DePA enhances detection speed by 0.62-23x, making it practical for large-scale dataset cleansing. Overall, by addressing the unique challenges of dead code poisoning, DePA provides a robust and efficient solution for safeguarding the integrity of code generation model training datasets.
This paper presents a multi-stage reranking system for repository-level code search, which leverages the vastly available commit histories of large open-source repositories to aid in bug fixing. We define the task of repository-level code search as retrieving the set of files from the current state of a code repository that are most relevant to addressing a user's question or bug. The proposed approach combines BM25-based retrieval over commit messages with neural reranking using CodeBERT to identify the most pertinent files. By learning patterns from diverse repositories and their commit histories, the system can surface relevant files for the task at hand. The system leverages both commit messages and source code for relevance matching, and is evaluated in both normal and oracle settings. Experiments on a new dataset created from 7 popular open-source repositories demonstrate substantial improvements of up to 80% in MAP, MRR and P@1 over the BM25 baseline, across a diverse set of queries, demonstrating the effectiveness this approach. We hope this work aids LLM agents as a tool for better code search and understanding. Our code and results obtained are publicly available.
Adaptation is to make model learn the patterns shifted from the training distribution. In general, this adaptation is formulated as the minimum entropy problem. However, the minimum entropy problem has inherent limitation -- shifted initialization cascade phenomenon. We extend the relationship between the minimum entropy problem and the minimum set cover problem via Lebesgue integral. This extension reveals that internal mechanism of the minimum entropy problem ignores the relationship between disentangled representations, which leads to shifted initialization cascade. From the analysis, we introduce a new clustering algorithm, Union-find based Recursive Clustering Algorithm~(URECA). URECA is an efficient clustering algorithm for the leverage of the relationships between disentangled representations. The update rule of URECA depends on Thresholdly-Updatable Stationary Assumption to dynamics as a released version of Stationary Assumption. This assumption helps URECA to transport disentangled representations with no errors based on the relationships between disentangled representations. URECA also utilize simulation trick to efficiently cluster disentangled representations. The wide range of evaluations show that URECA achieves consistent performance gains for the few-shot adaptation to diverse types of shifts along with advancement to State-of-The-Art performance in CoSQA in the scenario of query shift.
Recent developments in Large Language Model (LLM) agents are revolutionizing Autonomous Software Engineering (ASE), enabling automated coding, problem fixes, and feature improvements. However, localization -- precisely identifying software problems by navigating to relevant code sections -- remains a significant challenge. Current approaches often yield suboptimal results due to a lack of effective integration between LLM agents and precise code search mechanisms. This paper introduces OrcaLoca, an LLM agent framework that improves accuracy for software issue localization by integrating priority-based scheduling for LLM-guided action, action decomposition with relevance scoring, and distance-aware context pruning. Experimental results demonstrate that OrcaLoca becomes the new open-source state-of-the-art (SOTA) in function match rate (65.33%) on SWE-bench Lite. It also improves the final resolved rate of an open-source framework by 6.33 percentage points through its patch generation integration.
Language models have proven successful across a wide range of software engineering tasks, but their significant computational costs often hinder their practical adoption. To address this challenge, researchers have begun applying various compression strategies to improve the efficiency of language models for code. These strategies aim to optimize inference latency and memory usage, though often at the cost of reduced model effectiveness. However, there is still a significant gap in understanding how these strategies influence the efficiency and effectiveness of language models for code. Here, we empirically investigate the impact of three well-known compression strategies -- knowledge distillation, quantization, and pruning -- across three different classes of software engineering tasks: vulnerability detection, code summarization, and code search. Our findings reveal that the impact of these strategies varies greatly depending on the task and the specific compression method employed. Practitioners and researchers can use these insights to make informed decisions when selecting the most appropriate compression strategy, balancing both efficiency and effectiveness based on their specific needs.
Low isotropy in an embedding space impairs performance on tasks involving semantic inference. Our study investigates the impact of isotropy on semantic code search performance and explores post-processing techniques to mitigate this issue. We analyze various code language models, examine isotropy in their embedding spaces, and its influence on search effectiveness. We propose a modified ZCA whitening technique to control isotropy levels in embeddings. Our results demonstrate that Soft-ZCA whitening improves the performance of pre-trained code language models and can complement contrastive fine-tuning.
Machine Learning (ML) for software engineering (SE) has gained prominence due to its ability to significantly enhance the performance of various SE applications. This progress is largely attributed to the development of generalizable source code representations that effectively capture the syntactic and semantic characteristics of code. In recent years, pre-trained transformer-based models, inspired by natural language processing (NLP), have shown remarkable success in SE tasks. However, source code contains structural and semantic properties embedded within its grammar, which can be extracted from structured code-views like the Abstract Syntax Tree (AST), Data-Flow Graph (DFG), and Control-Flow Graph (CFG). These code-views can complement NLP techniques, further improving SE tasks. Unfortunately, there are no flexible frameworks to infuse arbitrary code-views into existing transformer-based models effectively. Therefore, in this work, we propose CodeSAM, a novel scalable framework to infuse multiple code-views into transformer-based models by creating self-attention masks. We use CodeSAM to fine-tune a small language model (SLM) like CodeBERT on the downstream SE tasks of semantic code search, code clone detection, and program classification. Experimental results show that by using this technique, we improve downstream performance when compared to SLMs like GraphCodeBERT and CodeBERT on all three tasks by utilizing individual code-views or a combination of code-views during fine-tuning. We believe that these results are indicative that techniques like CodeSAM can help create compact yet performant code SLMs that fit in resource constrained settings.
Large Language Models (LLMs) have shown great potential in automatically generating and optimizing (meta)heuristics, making them valuable tools in heuristic optimization tasks. However, LLMs are generally inefficient when it comes to fine-tuning hyper-parameters of the generated algorithms, often requiring excessive queries that lead to high computational and financial costs. This paper presents a novel hybrid approach, LLaMEA-HPO, which integrates the open source LLaMEA (Large Language Model Evolutionary Algorithm) framework with a Hyper-Parameter Optimization (HPO) procedure in the loop. By offloading hyper-parameter tuning to an HPO procedure, the LLaMEA-HPO framework allows the LLM to focus on generating novel algorithmic structures, reducing the number of required LLM queries and improving the overall efficiency of the optimization process. We empirically validate the proposed hybrid framework on benchmark problems, including Online Bin Packing, Black-Box Optimization, and the Traveling Salesperson Problem. Our results demonstrate that LLaMEA-HPO achieves superior or comparable performance compared to existing LLM-driven frameworks while significantly reducing computational costs. This work highlights the importance of separating algorithmic innovation and structural code search from parameter tuning in LLM-driven code optimization and offers a scalable approach to improve the efficiency and effectiveness of LLM-based code generation.
Code Search is a key task that many programmers often have to perform while developing solutions to problems. Current methodologies suffer from an inability to perform accurately on prompts that contain some ambiguity or ones that require additional context relative to a code-base. We introduce the approach of using Retrieval Augmented Generation (RAG) powered agents to inject information into user prompts allowing for better inputs into embedding models. By utilizing RAG, agents enhance user queries with relevant details from GitHub repositories, making them more informative and contextually aligned. Additionally, we introduce a multi-stream ensemble approach which when paired with agentic workflow can obtain improved retrieval accuracy, which we deploy on application called repo-rift.com. Experimental results on the CodeSearchNet dataset demonstrate that RepoRift significantly outperforms existing methods, achieving an 78.2% success rate at Success@10 and a 34.6% success rate at Success@1. This research presents a substantial advancement in semantic code search, highlighting the potential of agentic LLMs and RAG to enhance code retrieval systems.