In recent years, quantum machine learning has emerged as a promising intersection between quantum physics and artificial intelligence, particularly in domains requiring advanced pattern recognition such as healthcare. This study investigates the effectiveness of Quantum Support Vector Machines (QSVM), which leverage quantum mechanical phenomena like superposition and entanglement to construct high-dimensional Hilbert spaces for data classification. Focusing on lung cancer diagnosis, a concrete and critical healthcare application, we analyze how different quantum feature maps influence classification performance. Using a real-world dataset of 309 patient records with significant class imbalance (39 non-cancer vs. 270 cancer cases), we constructed six balanced subsets for robust evaluation. QSVM models were implemented using Qiskit and executed on the qasm simulator, employing three distinct quantum feature maps: ZFeatureMap, ZZFeatureMap, and PauliFeatureMap. Performance was assessed using accuracy, precision, recall, specificity, and F1-score. Results show that the PauliFeatureMap consistently outperformed the others, achieving perfect classification in three subsets and strong performance overall. These findings demonstrate how quantum computational principles can be harnessed to enhance diagnostic capabilities, reinforcing the importance of physics-based modeling in emerging AI applications within healthcare.
Cervical cancer remains a significant health problem, especially in developing countries. Early detection is critical for effective treatment. Convolutional neural networks (CNN) have shown promise in automated cervical cancer screening, but their performance depends on Pap smear image quality. This study investigates the impact of various image preprocessing techniques on CNN performance for cervical cancer classification using the SIPaKMeD dataset. Three preprocessing techniques were evaluated: perona-malik diffusion (PMD) filter for noise reduction, contrast-limited adaptive histogram equalization (CLAHE) for image contrast enhancement, and the proposed hybrid PMD filter-CLAHE approach. The enhanced image datasets were evaluated on pretrained models, such as ResNet-34, ResNet-50, SqueezeNet-1.0, MobileNet-V2, EfficientNet-B0, EfficientNet-B1, DenseNet-121, and DenseNet-201. The results show that hybrid preprocessing PMD filter-CLAHE can improve the Pap smear image quality and CNN architecture performance compared to the original images. The maximum metric improvements are 13.62% for accuracy, 10.04% for precision, 13.08% for recall, and 14.34% for F1-score. The proposed hybrid PMD filter-CLAHE technique offers a new perspective in improving cervical cancer classification performance using CNN architectures.
Spiking Neural Networks (SNNs) event-driven nature enables efficient encoding of spatial and temporal features, making them suitable for dynamic time-dependent data processing. Despite their biological relevance, SNNs have seen limited application in medical image recognition due to difficulties in matching the performance of conventional deep learning models. To address this, we propose a novel breast cancer classification approach that combines SNNs with Lempel-Ziv Complexity (LZC) a computationally efficient measure of sequence complexity. LZC enhances the interpretability and accuracy of spike-based models by capturing structural patterns in neural activity. Our study explores both biophysical Leaky Integrate-and-Fire (LIF) and probabilistic Levy-Baxter (LB) neuron models under supervised, unsupervised, and hybrid learning regimes. Experiments were conducted on the Breast Cancer Wisconsin dataset using numerical features derived from medical imaging. LB-based models consistently exceeded 90.00% accuracy, while LIF-based models reached over 85.00%. The highest accuracy of 98.25% was achieved using an ANN-to-SNN conversion method applied to both neuron models comparable to traditional deep learning with back-propagation, but at up to 100 times lower computational cost. This hybrid approach merges deep learning performance with the efficiency and plausibility of SNNs, yielding top results at lower computational cost. We hypothesize that the synergy between temporal-coding, spike-sparsity, and LZC-driven complexity analysis enables more-efficient feature extraction. Our findings demonstrate that SNNs combined with LZC offer promising, biologically plausible alternative to conventional neural networks in medical diagnostics, particularly for resource-constrained or real-time systems.
Accurate and reliable skin cancer diagnosis is critical for early treatment and improved patient outcomes. Deep learning (DL) models have shown promise in automating skin cancer classification, but their performance can be limited by data scarcity and a lack of uncertainty awareness. In this study, we present a comprehensive evaluation of DL-based skin lesion classification using transfer learning and uncertainty quantification (UQ) on the HAM10000 dataset. In the first phase, we benchmarked several pre-trained feature extractors-including Contrastive Language-Image Pretraining (CLIP) variants, Residual Network-50 (ResNet50), Densely Connected Convolutional Network (DenseNet121), Visual Geometry Group network (VGG16), and EfficientNet-V2-Large-combined with a range of traditional classifiers such as Support Vector Machine (SVM), eXtreme Gradient Boosting (XGBoost), and logistic regression. Our results show that CLIP-based vision transformers, particularly LAION CLIP ViT-H/14 with SVM, deliver the highest classification performance. In the second phase, we incorporated UQ using Monte Carlo Dropout (MCD), Ensemble, and Ensemble Monte Carlo Dropout (EMCD) to assess not only prediction accuracy but also the reliability of model outputs. We evaluated these models using uncertainty-aware metrics such as uncertainty accuracy(UAcc), uncertainty sensitivity(USen), uncertainty specificity(USpe), and uncertainty precision(UPre). The results demonstrate that ensemble methods offer a good trade-off between accuracy and uncertainty handling, while EMCD is more sensitive to uncertain predictions. This study highlights the importance of integrating UQ into DL-based medical diagnosis to enhance both performance and trustworthiness in real-world clinical applications.
The rapid advancement of deep learning in medical image analysis has greatly enhanced the accuracy of skin cancer classification. However, current state-of-the-art models, especially those based on transfer learning like ResNet50, come with significant computational overhead, rendering them impractical for deployment in resource-constrained environments. This study proposes a custom CNN model that achieves a 96.7\% reduction in parameters (from 23.9 million in ResNet50 to 692,000) while maintaining a classification accuracy deviation of less than 0.022\%. Our empirical analysis of the HAM10000 dataset reveals that although transfer learning models provide a marginal accuracy improvement of approximately 0.022\%, they result in a staggering 13,216.76\% increase in FLOPs, considerably raising computational costs and inference latency. In contrast, our lightweight CNN architecture, which encompasses only 30.04 million FLOPs compared to ResNet50's 4.00 billion, significantly reduces energy consumption, memory footprint, and inference time. These findings underscore the trade-off between the complexity of deep models and their real-world feasibility, positioning our optimized CNN as a practical solution for mobile and edge-based skin cancer diagnostics.
Accurate identification of breast cancer types plays a critical role in guiding treatment decisions and improving patient outcomes. This paper presents an artificial intelligence enabled tool designed to aid in the identification of breast cancer types using histopathological biopsy images. Traditionally additional tests have to be done on women who are detected with breast cancer to find out the types of cancer it is to give the necessary cure. Those tests are not only invasive but also delay the initiation of treatment and increase patient burden. The proposed model utilizes a convolutional neural network (CNN) architecture to distinguish between benign and malignant tissues as well as accurate subclassification of breast cancer types. By preprocessing the images to reduce noise and enhance features, the model achieves reliable levels of classification performance. Experimental results on such datasets demonstrate the model's effectiveness, outperforming several existing solutions in terms of accuracy, precision, recall, and F1-score. The study emphasizes the potential of deep learning techniques in clinical diagnostics and offers a promising tool to assist pathologists in breast cancer classification.
Deep learning based cervical cancer classification can potentially increase access to screening in low-resource regions. However, deep learning models are often overconfident and do not reliably reflect diagnostic uncertainty. Moreover, they are typically optimized to generate maximum-likelihood predictions, which fail to convey uncertainty or ambiguity in their results. Such challenges can be addressed using conformal prediction, a model-agnostic framework for generating prediction sets that contain likely classes for trained deep-learning models. The size of these prediction sets indicates model uncertainty, contracting as model confidence increases. However, existing conformal prediction evaluation primarily focuses on whether the prediction set includes or covers the true class, often overlooking the presence of extraneous classes. We argue that prediction sets should be truthful and valuable to end users, ensuring that the listed likely classes align with human expectations rather than being overly relaxed and including false positives or unlikely classes. In this study, we comprehensively validate conformal prediction sets using expert annotation sets collected from multiple annotators. We evaluate three conformal prediction approaches applied to three deep-learning models trained for cervical atypia classification. Our expert annotation-based analysis reveals that conventional coverage-based evaluations overestimate performance and that current conformal prediction methods often produce prediction sets that are not well aligned with human labels. Additionally, we explore the capabilities of the conformal prediction methods in identifying ambiguous and out-of-distribution data.
Breast-conserving surgery (BCS) aims to completely remove malignant lesions while maximizing healthy tissue preservation. Intraoperative margin assessment is essential to achieve a balance between thorough cancer resection and tissue conservation. A deep ultraviolet fluorescence scanning microscope (DUV-FSM) enables rapid acquisition of whole surface images (WSIs) for excised tissue, providing contrast between malignant and normal tissues. However, breast cancer classification with DUV WSIs is challenged by high resolutions and complex histopathological features. This study introduces a DUV WSI classification framework using a patch-level vision transformer (ViT) model, capturing local and global features. Grad-CAM++ saliency weighting highlights relevant spatial regions, enhances result interpretability, and improves diagnostic accuracy for benign and malignant tissue classification. A comprehensive 5-fold cross-validation demonstrates the proposed approach significantly outperforms conventional deep learning methods, achieving a classification accuracy of 98.33%.
This paper introduces Tempered Fractional Gradient Descent (TFGD), a novel optimization framework that synergizes fractional calculus with exponential tempering to enhance gradient-based learning. Traditional gradient descent methods often suffer from oscillatory updates and slow convergence in high-dimensional, noisy landscapes. TFGD addresses these limitations by incorporating a tempered memory mechanism, where historical gradients are weighted by fractional coefficients $|w_j| = \binom{\alpha}{j}$ and exponentially decayed via a tempering parameter $\lambda$. Theoretical analysis establishes TFGD's convergence guarantees: in convex settings, it achieves an $\mathcal{O}(1/K)$ rate with alignment coefficient $d_{\alpha,\lambda} = (1 - e^{-\lambda})^{-\alpha}$, while stochastic variants attain $\mathcal{O}(1/k^\alpha)$ error decay. The algorithm maintains $\mathcal{O}(n)$ time complexity equivalent to SGD, with memory overhead scaling as $\mathcal{O}(d/\lambda)$ for parameter dimension $d$. Empirical validation on the Breast Cancer Wisconsin dataset demonstrates TFGD's superiority, achieving 98.25\% test accuracy (vs. 92.11\% for SGD) and 2$\times$ faster convergence. The tempered memory mechanism proves particularly effective in medical classification tasks, where feature correlations benefit from stable gradient averaging. These results position TFGD as a robust alternative to conventional optimizers in both theoretical and applied machine learning.
Lung cancer, a severe form of malignant tumor that originates in the tissues of the lungs, can be fatal if not detected in its early stages. It ranks among the top causes of cancer-related mortality worldwide. Detecting lung cancer manually using chest X-Ray image or Computational Tomography (CT) scans image poses significant challenges for radiologists. Hence, there is a need for automatic diagnosis system of lung cancers from radiology images. With the recent emergence of deep learning, particularly through Convolutional Neural Networks (CNNs), the automated detection of lung cancer has become a much simpler task. Nevertheless, numerous researchers have addressed that the performance of conventional CNNs may be hindered due to class imbalance issue, which is prevalent in medical images. In this research work, we have proposed a novel CNN architecture ``Multi-Scale Dense Network (MSD-Net)'' (trained-from-scratch). The novelties we bring in the proposed model are (I) We introduce novel dense modules in the 4th block and 5th block of the CNN model. We have leveraged 3 depthwise separable convolutional (DWSC) layers, and one 1x1 convolutional layer in each dense module, in order to reduce complexity of the model considerably. (II) Additionally, we have incorporated one skip connection from 3rd block to 5th block and one parallel branch connection from 4th block to Global Average Pooling (GAP) layer. We have utilized dilated convolutional layer (with dilation rate=2) in the last parallel branch in order to extract multi-scale features. Extensive experiments reveal that our proposed model has outperformed latest CNN model ConvNext-Tiny, recent trend Vision Transformer (ViT), Pooling-based ViT (PiT), and other existing models by significant margins.
Cytology is essential for cancer diagnostics and screening due to its minimally invasive nature. However, the development of robust deep learning models for digital cytology is challenging due to the heterogeneity in staining and preparation methods of samples, differences across organs, and the limited availability of large, diverse, annotated datasets. Developing a task-specific model for every cytology application is impractical and non-cytology-specific foundation models struggle to generalize to tasks in this domain where the emphasis is on cell morphology. To address these challenges, we introduce CytoFM, the first cytology self-supervised foundation model. Using iBOT, a self-supervised Vision Transformer (ViT) training framework incorporating masked image modeling and self-distillation, we pretrain CytoFM on a diverse collection of cytology datasets to learn robust, transferable representations. We evaluate CytoFM on multiple downstream cytology tasks, including breast cancer classification and cell type identification, using an attention-based multiple instance learning framework. Our results demonstrate that CytoFM performs better on two out of three downstream tasks than existing foundation models pretrained on histopathology (UNI) or natural images (iBOT-Imagenet). Visualizations of learned representations demonstrate our model is able to attend to cytologically relevant features. Despite a small pre-training dataset, CytoFM's promising results highlight the ability of task-agnostic pre-training approaches to learn robust and generalizable features from cytology data.
This study investigates the application of diffusion models in medical image classification (DiffMIC), focusing on skin and oral lesions. Utilizing the datasets PAD-UFES-20 for skin cancer and P-NDB-UFES for oral cancer, the diffusion model demonstrated competitive performance compared to state-of-the-art deep learning models like Convolutional Neural Networks (CNNs) and Transformers. Specifically, for the PAD-UFES-20 dataset, the model achieved a balanced accuracy of 0.6457 for six-class classification and 0.8357 for binary classification (cancer vs. non-cancer). For the P-NDB-UFES dataset, it attained a balanced accuracy of 0.9050. These results suggest that diffusion models are viable models for classifying medical images of skin and oral lesions. In addition, we investigate the robustness of the model trained on PAD-UFES-20 for skin cancer but tested on the clinical images of the HIBA dataset.
The integration of heterogeneous multi-omics datasets at a systems level remains a central challenge for developing analytical and computational models in precision cancer diagnostics. This paper introduces Multi-Omics Graph Kolmogorov-Arnold Network (MOGKAN), a deep learning framework that utilizes messenger-RNA, micro-RNA sequences, and DNA methylation samples together with Protein-Protein Interaction (PPI) networks for cancer classification across 31 different cancer types. The proposed approach combines differential gene expression with DESeq2, Linear Models for Microarray (LIMMA), and Least Absolute Shrinkage and Selection Operator (LASSO) regression to reduce multi-omics data dimensionality while preserving relevant biological features. The model architecture is based on the Kolmogorov-Arnold theorem principle and uses trainable univariate functions to enhance interpretability and feature analysis. MOGKAN achieves classification accuracy of 96.28 percent and exhibits low experimental variability in comparison to related deep learning-based models. The biomarkers identified by MOGKAN were validated as cancer-related markers through Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analysis. By integrating multi-omics data with graph-based deep learning, our proposed approach demonstrates robust predictive performance and interpretability with potential to enhance the translation of complex multi-omics data into clinically actionable cancer diagnostics.
The complexity and variability inherent in high-resolution pathological images present significant challenges in computational pathology. While pathology foundation models leveraging AI have catalyzed transformative advancements, their development demands large-scale datasets, considerable storage capacity, and substantial computational resources. Furthermore, ensuring their clinical applicability and generalizability requires rigorous validation across a broad spectrum of clinical tasks. Here, we present PathOrchestra, a versatile pathology foundation model trained via self-supervised learning on a dataset comprising 300K pathological slides from 20 tissue and organ types across multiple centers. The model was rigorously evaluated on 112 clinical tasks using a combination of 61 private and 51 public datasets. These tasks encompass digital slide preprocessing, pan-cancer classification, lesion identification, multi-cancer subtype classification, biomarker assessment, gene expression prediction, and the generation of structured reports. PathOrchestra demonstrated exceptional performance across 27,755 WSIs and 9,415,729 ROIs, achieving over 0.950 accuracy in 47 tasks, including pan-cancer classification across various organs, lymphoma subtype diagnosis, and bladder cancer screening. Notably, it is the first model to generate structured reports for high-incidence colorectal cancer and diagnostically complex lymphoma-areas that are infrequently addressed by foundational models but hold immense clinical potential. Overall, PathOrchestra exemplifies the feasibility and efficacy of a large-scale, self-supervised pathology foundation model, validated across a broad range of clinical-grade tasks. Its high accuracy and reduced reliance on extensive data annotation underline its potential for clinical integration, offering a pathway toward more efficient and high-quality medical services.
Breast cancer, the most common malignancy among women, requires precise detection and classification for effective treatment. Immunohistochemistry (IHC) biomarkers like HER2, ER, and PR are critical for identifying breast cancer subtypes. However, traditional IHC classification relies on pathologists' expertise, making it labor-intensive and subject to significant inter-observer variability. To address these challenges, this study introduces the India Pathology Breast Cancer Dataset (IPD-Breast), comprising of 1,272 IHC slides (HER2, ER, and PR) aimed at automating receptor status classification. The primary focus is on developing predictive models for HER2 3-way classification (0, Low, High) to enhance prognosis. Evaluation of multiple deep learning models revealed that an end-to-end ConvNeXt network utilizing low-resolution IHC images achieved an AUC, F1, and accuracy of 91.79%, 83.52%, and 83.56%, respectively, for 3-way classification, outperforming patch-based methods by over 5.35% in F1 score. This study highlights the potential of simple yet effective deep learning techniques to significantly improve accuracy and reproducibility in breast cancer classification, supporting their integration into clinical workflows for better patient outcomes.
Breast cancer remains one of the leading causes of cancer-related deaths worldwide. Early detection is crucial for improving patient outcomes, yet the diagnostic process is often complex and prone to inconsistencies among pathologists. Computer-aided diagnostic approaches have significantly enhanced breast cancer detection, particularly in binary classification (benign vs. malignant). However, these methods face challenges in multiclass classification, leading to frequent mispredictions. In this work, we propose a novel adaptive learning approach for multiclass breast cancer classification using H&E-stained histopathology images. First, we introduce a misprediction risk analysis framework that quantifies and ranks the likelihood of an image being mislabeled by a classifier. This framework leverages an interpretable risk model that requires only a small number of labeled samples for training. Next, we present an adaptive learning strategy that fine-tunes classifiers based on the specific characteristics of a given dataset. This approach minimizes misprediction risk, allowing the classifier to adapt effectively to the target workload. We evaluate our proposed solutions on real benchmark datasets, demonstrating that our risk analysis framework more accurately identifies mispredictions compared to existing methods. Furthermore, our adaptive learning approach significantly improves the performance of state-of-the-art deep neural network classifiers.
Despite significant progress in robust deep learning techniques for mammogram breast cancer classification, their reliability in real-world clinical development settings remains uncertain. The translation of these models to clinical practice faces challenges due to variations in medical centers, imaging protocols, and patient populations. To enhance their robustness, invariant learning methods have been proposed, prioritizing causal factors over misleading features. However, their effectiveness in clinical development and impact on mammogram classification require investigation. This paper reassesses the application of invariant learning for breast cancer risk estimation based on mammograms. Utilizing diverse multi-site public datasets, it represents the first study in this area. The objective is to evaluate invariant learning's benefits in developing robust models. Invariant learning methods, including Invariant Risk Minimization and Variance Risk Extrapolation, are compared quantitatively against Empirical Risk Minimization. Evaluation metrics include accuracy, average precision, and area under the curve. Additionally, interpretability is examined through class activation maps and visualization of learned representations. This research examines the advantages, limitations, and challenges of invariant learning for mammogram classification, guiding future studies to develop generalized methods for breast cancer prediction on whole mammograms in out-of-domain scenarios.
The past decade has witnessed a substantial increase in the number of startups and companies offering AI-based solutions for clinical decision support in medical institutions. However, the critical nature of medical decision-making raises several concerns about relying on external software. Key issues include potential variations in image modalities and the medical devices used to obtain these images, potential legal issues, and adversarial attacks. Fortunately, the open-source nature of machine learning research has made foundation models publicly available and straightforward to use for medical applications. This accessibility allows medical institutions to train their own AI-based models, thereby mitigating the aforementioned concerns. Given this context, an important question arises: how much data do medical institutions need to train effective AI models? In this study, we explore this question in relation to breast cancer detection, a particularly contested area due to the prevalence of this disease, which affects approximately 1 in every 8 women. Through large-scale experiments on various patient sizes in the training set, we show that medical institutions do not need a decade's worth of MRI images to train an AI model that performs competitively with the state-of-the-art, provided the model leverages foundation models. Furthermore, we observe that for patient counts greater than 50, the number of patients in the training set has a negligible impact on the performance of models and that simple ensembles further improve the results without additional complexity.
Computational pathology, integrating computational methods and digital imaging, has shown to be effective in advancing disease diagnosis and prognosis. In recent years, the development of machine learning and deep learning has greatly bolstered the power of computational pathology. However, there still remains the issue of data scarcity and data imbalance, which can have an adversarial effect on any computational method. In this paper, we introduce an efficient and effective data augmentation strategy to generate new pathology images from the existing pathology images and thus enrich datasets without additional data collection or annotation costs. To evaluate the proposed method, we employed two sets of colorectal cancer datasets and obtained improved classification results, suggesting that the proposed simple approach holds the potential for alleviating the data scarcity and imbalance in computational pathology.
In computational pathology, researchers often face challenges due to the scarcity of labeled pathology datasets. Data augmentation emerges as a crucial technique to mitigate this limitation. In this study, we introduce an efficient data augmentation method for pathology images, called USegMix. Given a set of pathology images, the proposed method generates a new, synthetic image in two phases. In the first phase, USegMix constructs a pool of tissue segments in an automated and unsupervised manner using superpixels and the Segment Anything Model (SAM). In the second phase, USegMix selects a candidate segment in a target image, replaces it with a similar segment from the segment pool, and blends them by using a pre-trained diffusion model. In this way, USegMix can generate diverse and realistic pathology images. We rigorously evaluate the effectiveness of USegMix on two pathology image datasets of colorectal and prostate cancers. The results demonstrate improvements in cancer classification performance, underscoring the substantial potential of USegMix for pathology image analysis.