Histological tissue examination has been a longstanding practice for cancer diagnosis where pathologists identify the presence of tumors on glass slides. Slides acquired from laboratory routine may contain unintentional artifacts due to complications in surgical resection. Blood and damaged tissue artifacts are two common problems associated with transurethral resection of the bladder tumor. Differences in histotechnical procedures among laboratories may also result in color variations and minor inconsistencies in outcome. A digitized version of a glass slide known as a whole slide image (WSI) holds enormous potential for automated diagnostics. The presence of irrelevant areas in a WSI undermines diagnostic value for pathologists as well as computational pathology (CPATH) systems. Therefore, automatic detection and exclusion of diagnostically irrelevant areas may lead to more reliable predictions. In this paper, we are detecting blood and damaged tissue against diagnostically relevant tissue. We gauge the effectiveness of transfer learning against training from scratch. Best models give 0.99 and 0.89 F1 scores for blood and damaged tissue detection. Since blood and damaged tissue have subtle color differences, we assess the impact of color processing methods on the binary classification performance of five well-known architectures. Finally, we remove the color to understand its importance against morphology on classification performance.
Tuberculosis (TB) remains a global health threat, ranking among the leading causes of mortality worldwide. In this context, machine learning (ML) has emerged as a transformative force, providing innovative solutions to the complexities associated with TB treatment.This study explores how machine learning, especially with tabular data, can be used to predict Tuberculosis (TB) treatment outcomes more accurately. It transforms this prediction task into a binary classification problem, generating risk scores from patient data sourced from NIKSHAY, India's national TB control program, which includes over 500,000 patient records. Data preprocessing is a critical component of the study, and the model achieved an recall of 98% and an AUC-ROC score of 0.95 on the validation set, which includes 20,000 patient records.We also explore the use of Natural Language Processing (NLP) for improved model learning. Our results, corroborated by various metrics and ablation studies, validate the effectiveness of our approach. The study concludes by discussing the potential ramifications of our research on TB eradication efforts and proposing potential avenues for future work. This study marks a significant stride in the battle against TB, showcasing the potential of machine learning in healthcare.
Diffusion models pose risks of privacy breaches and copyright disputes, primarily stemming from the potential utilization of unauthorized data during the training phase. The Training Membership Inference (TMI) task aims to determine whether a specific sample has been used in the training process of a target model, representing a critical tool for privacy violation verification. However, the increased stochasticity inherent in diffusion renders traditional shadow-model-based or metric-based methods ineffective when applied to diffusion models. Moreover, existing methods only yield binary classification labels which lack necessary comprehensibility in practical applications. In this paper, we explore a novel perspective for the TMI task by leveraging the intrinsic generative priors within the diffusion model. Compared with unseen samples, training samples exhibit stronger generative priors within the diffusion model, enabling the successful reconstruction of substantially degraded training images. Consequently, we propose the Degrade Restore Compare (DRC) framework. In this framework, an image undergoes sequential degradation and restoration, and its membership is determined by comparing it with the restored counterpart. Experimental results verify that our approach not only significantly outperforms existing methods in terms of accuracy but also provides comprehensible decision criteria, offering evidence for potential privacy violations.
The novel coronavirus universally known as the COVID-19 outbreak arises at the end of 2019 in one of the East Asian countries and it is subjected to widespread discussion and debate. There are almost 200 countries affected across the globe by COVID-19 and it has ruined many lives and the global economy. The virus is spreading very rapidly at the pace of around 10 fold in less than a month. Also, in the case of COVID- 19 it is critical to detect the infection as it employs various symptoms which may differ from person to person. Hence, diagnosis in starting stage and treatment are very much important for such type of infectious disease. The chest x-ray is one of the primary techniques among blood tests and Computed Tomography contributes a major role in the early diagnosis of COVID-19. There is a rising need for automated and auxiliary diagnostic tools for early diagnosis, as there are no accurate and truthful automated tool kits on hand. In this research study, we have designed a Convolution Neural Network architecture a deep net for the classification of x-ray images of chest among two classes: COVID-19 or Non-COVID- 19 infection. The anticipated model is expected to provide accurate diagnostic results and produced classification accuracy of 99%, 100%, and 100% with 70%-30%,75%-25% and 80%-20% train-test data split respectively, for the binary classification of the x-ray image to be COVID-19 or Non-COVID-19 infection category. We have designed the CNN with optimized parameters with 3 convolution layers and optimized number of filters in each layer.
Benchmarking models via classical simulations is one of the main ways to judge ideas in quantum machine learning before noise-free hardware is available. However, the huge impact of the experimental design on the results, the small scales within reach today, as well as narratives influenced by the commercialisation of quantum technologies make it difficult to gain robust insights. To facilitate better decision-making we develop an open-source package based on the PennyLane software framework and use it to conduct a large-scale study that systematically tests 12 popular quantum machine learning models on 6 binary classification tasks used to create 160 individual datasets. We find that overall, out-of-the-box classical machine learning models outperform the quantum classifiers. Moreover, removing entanglement from a quantum model often results in as good or better performance, suggesting that "quantumness" may not be the crucial ingredient for the small learning tasks considered here. Our benchmarks also unlock investigations beyond simplistic leaderboard comparisons, and we identify five important questions for quantum model design that follow from our results.
Group imbalance has been a known problem in empirical risk minimization (ERM), where the achieved high average accuracy is accompanied by low accuracy in a minority group. Despite algorithmic efforts to improve the minority group accuracy, a theoretical generalization analysis of ERM on individual groups remains elusive. By formulating the group imbalance problem with the Gaussian Mixture Model, this paper quantifies the impact of individual groups on the sample complexity, the convergence rate, and the average and group-level testing performance. Although our theoretical framework is centered on binary classification using a one-hidden-layer neural network, to the best of our knowledge, we provide the first theoretical analysis of the group-level generalization of ERM in addition to the commonly studied average generalization performance. Sample insights of our theoretical results include that when all group-level co-variance is in the medium regime and all mean are close to zero, the learning performance is most desirable in the sense of a small sample complexity, a fast training rate, and a high average and group-level testing accuracy. Moreover, we show that increasing the fraction of the minority group in the training data does not necessarily improve the generalization performance of the minority group. Our theoretical results are validated on both synthetic and empirical datasets, such as CelebA and CIFAR-10 in image classification.
Brachycephaly, a conformation trait in some dog breeds, causes BOAS, a respiratory disorder that affects the health and welfare of the dogs with various symptoms. In this paper, a new annotated dataset composed of 190 images of bulldogs' nostrils is presented. Three degrees of stenosis are approximately equally represented in the dataset: mild, moderate and severe stenosis. The dataset also comprises a small quantity of non stenotic nostril images. To the best of our knowledge, this is the first image dataset addressing this problem. Furthermore, deep learning is investigated as an alternative to automatically infer stenosis degree using nostril images. In this work, several neural networks were tested: ResNet50, MobileNetV3, DenseNet201, SwinV2 and MaxViT. For this evaluation, the problem was modeled in two different ways: first, as a three-class classification problem (mild or open, moderate, and severe); second, as a binary classification problem, with severe stenosis as target. For the multiclass classification, a maximum median f-score of 53.77\% was achieved by the MobileNetV3. For binary classification, a maximum median f-score of 72.08\% has been reached by ResNet50, indicating that the problem is challenging but possibly tractable.
Automated slice classification is clinically relevant since it can be incorporated into medical image segmentation workflows as a preprocessing step that would flag slices with a higher probability of containing tumors, thereby directing physicians attention to the important slices. In this work, we train a ResNet-18 network to classify axial slices of lymphoma PET/CT images (collected from two institutions) depending on whether the slice intercepted a tumor (positive slice) in the 3D image or if the slice did not (negative slice). Various instances of the network were trained on 2D axial datasets created in different ways: (i) slice-level split and (ii) patient-level split; inputs of different types were used: (i) only PET slices and (ii) concatenated PET and CT slices; and different training strategies were employed: (i) center-aware (CAW) and (ii) center-agnostic (CAG). Model performances were compared using the area under the receiver operating characteristic curve (AUROC) and the area under the precision-recall curve (AUPRC), and various binary classification metrics. We observe and describe a performance overestimation in the case of slice-level split as compared to the patient-level split training. The model trained using patient-level split data with the network input containing only PET slices in the CAG training regime was the best performing/generalizing model on a majority of metrics. Our models were additionally more closely compared using the sensitivity metric on the positive slices from their respective test sets.
Applications that deal with sensitive information may have restrictions placed on the data available to a machine learning (ML) classifier. For example, in some applications, a classifier may not have direct access to sensitive attributes, affecting its ability to produce accurate and fair decisions. This paper proposes a framework that models the trade-off between accuracy and fairness under four practical scenarios that dictate the type of data available for analysis. Prior works examine this trade-off by analyzing the outputs of a scoring function that has been trained to implicitly learn the underlying distribution of the feature vector, class label, and sensitive attribute of a dataset. In contrast, our framework directly analyzes the behavior of the optimal Bayesian classifier on this underlying distribution by constructing a discrete approximation it from the dataset itself. This approach enables us to formulate multiple convex optimization problems, which allow us to answer the question: How is the accuracy of a Bayesian classifier affected in different data restricting scenarios when constrained to be fair? Analysis is performed on a set of fairness definitions that include group and individual fairness. Experiments on three datasets demonstrate the utility of the proposed framework as a tool for quantifying the trade-offs among different fairness notions and their distributional dependencies.
The internet has brought both benefits and harms to society. A prime example of the latter is misinformation, including conspiracy theories, which flood the web. Recent advances in natural language processing, particularly the emergence of large language models (LLMs), have improved the prospects of accurate misinformation detection. However, most LLM-based approaches to conspiracy theory detection focus only on binary classification and fail to account for the important relationship between misinformation and affective features (i.e., sentiment and emotions). Driven by a comprehensive analysis of conspiracy text that reveals its distinctive affective features, we propose ConspEmoLLM, the first open-source LLM that integrates affective information and is able to perform diverse tasks relating to conspiracy theories. These tasks include not only conspiracy theory detection, but also classification of theory type and detection of related discussion (e.g., opinions towards theories). ConspEmoLLM is fine-tuned based on an emotion-oriented LLM using our novel ConDID dataset, which includes five tasks to support LLM instruction tuning and evaluation. We demonstrate that when applied to these tasks, ConspEmoLLM largely outperforms several open-source general domain LLMs and ChatGPT, as well as an LLM that has been fine-tuned using ConDID, but which does not use affective features. This project will be released on https://github.com/lzw108/ConspEmoLLM/.
User financial default prediction plays a critical role in credit risk forecasting and management. It aims at predicting the probability that the user will fail to make the repayments in the future. Previous methods mainly extract a set of user individual features regarding his own profiles and behaviors and build a binary-classification model to make default predictions. However, these methods cannot get satisfied results, especially for users with limited information. Although recent efforts suggest that default prediction can be improved by social relations, they fail to capture the higher-order topology structure at the level of small subgraph patterns. In this paper, we fill in this gap by proposing a motif-preserving Graph Neural Network with curriculum learning (MotifGNN) to jointly learn the lower-order structures from the original graph and higherorder structures from multi-view motif-based graphs for financial default prediction. Specifically, to solve the problem of weak connectivity in motif-based graphs, we design the motif-based gating mechanism. It utilizes the information learned from the original graph with good connectivity to strengthen the learning of the higher-order structure. And considering that the motif patterns of different samples are highly unbalanced, we propose a curriculum learning mechanism on the whole learning process to more focus on the samples with uncommon motif distributions. Extensive experiments on one public dataset and two industrial datasets all demonstrate the effectiveness of our proposed method.
The problem of benign overfitting asks whether it is possible for a model to perfectly fit noisy training data and still generalize well. We study benign overfitting in two-layer leaky ReLU networks trained with the hinge loss on a binary classification task. We consider input data that can be decomposed into the sum of a common signal and a random noise component, that lie on subspaces orthogonal to one another. We characterize conditions on the signal to noise ratio (SNR) of the model parameters giving rise to benign versus non-benign (or harmful) overfitting: in particular, if the SNR is high then benign overfitting occurs, conversely if the SNR is low then harmful overfitting occurs. We attribute both benign and non-benign overfitting to an approximate margin maximization property and show that leaky ReLU networks trained on hinge loss with gradient descent (GD) satisfy this property. In contrast to prior work we do not require the training data to be nearly orthogonal. Notably, for input dimension $d$ and training sample size $n$, while results in prior work require $d = \Omega(n^2 \log n)$, here we require only $d = \Omega\left(n\right)$.
We show that protein sequences can be thought of as sentences in natural language processing and can be parsed using the existing Quantum Natural Language framework into parameterized quantum circuits of reasonable qubits, which can be trained to solve various protein-related machine-learning problems. We classify proteins based on their subcellular locations, a pivotal task in bioinformatics that is key to understanding biological processes and disease mechanisms. Leveraging the quantum-enhanced processing capabilities, we demonstrate that Quantum Tensor Networks (QTN) can effectively handle the complexity and diversity of protein sequences. We present a detailed methodology that adapts QTN architectures to the nuanced requirements of protein data, supported by comprehensive experimental results. We demonstrate two distinct QTNs, inspired by classical recurrent neural networks (RNN) and convolutional neural networks (CNN), to solve the binary classification task mentioned above. Our top-performing quantum model has achieved a 94% accuracy rate, which is comparable to the performance of a classical model that uses the ESM2 protein language model embeddings. It's noteworthy that the ESM2 model is extremely large, containing 8 million parameters in its smallest configuration, whereas our best quantum model requires only around 800 parameters. We demonstrate that these hybrid models exhibit promising performance, showcasing their potential to compete with classical models of similar complexity.
Recent advances in unsupervised learning have shown that unsupervised pre-training, followed by fine-tuning, can improve model generalization. However, a rigorous understanding of how the representation function learned on an unlabeled dataset affects the generalization of the fine-tuned model is lacking. Existing theoretical research does not adequately account for the heterogeneity of the distribution and tasks in pre-training and fine-tuning stage. To bridge this gap, this paper introduces a novel theoretical framework that illuminates the critical factor influencing the transferability of knowledge acquired during unsupervised pre-training to the subsequent fine-tuning phase, ultimately affecting the generalization capabilities of the fine-tuned model on downstream tasks. We apply our theoretical framework to analyze generalization bound of two distinct scenarios: Context Encoder pre-training with deep neural networks and Masked Autoencoder pre-training with deep transformers, followed by fine-tuning on a binary classification task. Finally, inspired by our findings, we propose a novel regularization method during pre-training to further enhances the generalization of fine-tuned model. Overall, our results contribute to a better understanding of unsupervised pre-training and fine-tuning paradigm, and can shed light on the design of more effective pre-training algorithms.
Graph Neural Networks (GNNs) have garnered intensive attention for Network Intrusion Detection System (NIDS) due to their suitability for representing the network traffic flows. However, most present GNN-based methods for NIDS are supervised or semi-supervised. Network flows need to be manually annotated as supervisory labels, a process that is time-consuming or even impossible, making NIDS difficult to adapt to potentially complex attacks, especially in large-scale real-world scenarios. The existing GNN-based self-supervised methods focus on the binary classification of network flow as benign or not, and thus fail to reveal the types of attack in practice. This paper studies the application of GNNs to identify the specific types of network flows in an unsupervised manner. We first design an encoder to obtain graph embedding, that introduces the graph attention mechanism and considers the edge information as the only essential factor. Then, a self-supervised method based on graph contrastive learning is proposed. The method samples center nodes, and for each center node, generates subgraph by it and its direct neighbor nodes, and corresponding contrastive subgraph from the interpolated graph, and finally constructs positive and negative samples from subgraphs. Furthermore, a structured contrastive loss function based on edge features and graph local topology is introduced. To the best of our knowledge, it is the first GNN-based self-supervised method for the multiclass classification of network flows in NIDS. Detailed experiments conducted on four real-world databases (NF-Bot-IoT, NF-Bot-IoT-v2, NF-CSE-CIC-IDS2018, and NF-CSE-CIC-IDS2018-v2) systematically compare our model with the state-of-the-art supervised and self-supervised models, illustrating the considerable potential of our method. Our code is accessible through https://github.com/renj-xu/NEGSC.
Recent advancements in Text-to-Image (T2I) models have raised significant safety concerns about their potential misuse for generating inappropriate or Not-Safe-For-Work (NSFW) contents, despite existing countermeasures such as NSFW classifiers or model fine-tuning for inappropriate concept removal. Addressing this challenge, our study unveils GuardT2I, a novel moderation framework that adopts a generative approach to enhance T2I models' robustness against adversarial prompts. Instead of making a binary classification, GuardT2I utilizes a Large Language Model (LLM) to conditionally transform text guidance embeddings within the T2I models into natural language for effective adversarial prompt detection, without compromising the models' inherent performance. Our extensive experiments reveal that GuardT2I outperforms leading commercial solutions like OpenAI-Moderation and Microsoft Azure Moderator by a significant margin across diverse adversarial scenarios. Our framework is available at https://github.com/cure-lab/GuardT2I.
Active learning is a learning strategy whereby the machine learning algorithm actively identifies and labels data points to optimize its learning. This strategy is particularly effective in domains where an abundance of unlabeled data exists, but the cost of labeling these data points is prohibitively expensive. In this paper, we consider cases of binary classification, where acquiring a positive instance incurs a significantly higher cost compared to that of negative instances. For example, in the financial industry, such as in money-lending businesses, a defaulted loan constitutes a positive event leading to substantial financial loss. To address this issue, we propose a shifted normal distribution sampling function that samples from a wider range than typical uncertainty sampling. Our simulation underscores that our proposed sampling function limits both noisy and positive label selection, delivering between 20% and 32% improved cost efficiency over different test datasets.
Tabular neural network (NN) has attracted remarkable attentions and its recent advances have gradually narrowed the performance gap with respect to tree-based models on many public datasets. While the mainstreams focus on calibrating NN to fit tabular data, we emphasize the importance of homogeneous embeddings and alternately concentrate on regularizing tabular inputs through supervised pretraining. Specifically, we extend a recent work (DeepTLF) and utilize the structure of pretrained tree ensembles to transform raw variables into a single vector (T2V), or an array of tokens (T2T). Without loss of space efficiency, these binarized embeddings can be consumed by canonical tabular NN with fully-connected or attention-based building blocks. Through quantitative experiments on 88 OpenML datasets with binary classification task, we validated that the proposed tree-regularized representation not only tapers the difference with respect to tree-based models, but also achieves on-par and better performance when compared with advanced NN models. Most importantly, it possesses better robustness and can be easily scaled and generalized as standalone encoder for tabular modality. Codes: https://github.com/milanlx/tree-regularized-embedding.
This paper addresses a critical preliminary step in radar signal processing: detecting the presence of a radar signal and robustly estimating its bandwidth. Existing methods which are largely statistical feature-based approaches face challenges in electronic warfare (EW) settings where prior information about signals is lacking. While alternate deep learning based methods focus on more challenging environments, they primarily formulate this as a binary classification problem. In this research, we propose a novel methodology that not only detects the presence of a signal, but also localises it in the time domain and estimates its operating frequency band at that point in time. To achieve robust estimation, we introduce a compound loss function that leverages complementary information from both time-domain and frequency-domain representations. By integrating these approaches, we aim to improve the efficiency and accuracy of radar signal detection and parameter estimation, reducing both unnecessary resource consumption and human effort in downstream tasks.
Non-neural Machine Learning (ML) and Deep Learning (DL) models are often used to predict system failures in the context of industrial maintenance. However, only a few researches jointly assess the effect of varying the amount of past data used to make a prediction and the extension in the future of the forecast. This study evaluates the impact of the size of the reading window and of the prediction window on the performances of models trained to forecast failures in three data sets concerning the operation of (1) an industrial wrapping machine working in discrete sessions, (2) an industrial blood refrigerator working continuously, and (3) a nitrogen generator working continuously. The problem is formulated as a binary classification task that assigns the positive label to the prediction window based on the probability of a failure to occur in such an interval. Six algorithms (logistic regression, random forest, support vector machine, LSTM, ConvLSTM, and Transformers) are compared using multivariate telemetry time series. The results indicate that, in the considered scenarios, the dimension of the prediction windows plays a crucial role and highlight the effectiveness of DL approaches at classifying data with diverse time-dependent patterns preceding a failure and the effectiveness of ML approaches at classifying similar and repetitive patterns preceding a failure.