Hyperspectral Image (HSI) classification using Convolutional Neural Networks (CNN) is widely found in the current literature. Approaches vary from using SVMs to 2D CNNs, 3D CNNs, 3D-2D CNNs. Besides 3D-2D CNNs and FuSENet, the other approaches do not consider both the spectral and spatial features together for HSI classification task, thereby resulting in poor performances. 3D CNNs are computationally heavy and are not widely used, while 2D CNNs do not consider multi-resolution processing of images, and only limits itself to the spatial features. Even though 3D-2D CNNs try to model the spectral and spatial features their performance seems limited when applied over multiple dataset. In this article, we propose SpectralNET, a wavelet CNN, which is a variation of 2D CNN for multi-resolution HSI classification. A wavelet CNN uses layers of wavelet transform to bring out spectral features. Computing a wavelet transform is lighter than computing 3D CNN. The spectral features extracted are then connected to the 2D CNN which bring out the spatial features, thereby creating a spatial-spectral feature vector for classification. Overall a better model is achieved that can classify multi-resolution HSI data with high accuracy. Experiments performed with SpectralNET on benchmark dataset, i.e. Indian Pines, University of Pavia, and Salinas Scenes confirm the superiority of proposed SpectralNET with respect to the state-of-the-art methods. The code is publicly available in https://github.com/tanmay-ty/SpectralNET.
This paper proposes a novel knowledge distillation-based learning method to improve the classification performance of convolutional neural networks (CNNs) without a pre-trained teacher network, called exit-ensemble distillation. Our method exploits the multi-exit architecture that adds auxiliary classifiers (called exits) in the middle of a conventional CNN, through which early inference results can be obtained. The idea of our method is to train the network using the ensemble of the exits as the distillation target, which greatly improves the classification performance of the overall network. Our method suggests a new paradigm of knowledge distillation; unlike the conventional notion of distillation where teachers only teach students, we show that students can also help other students and even the teacher to learn better. Experimental results demonstrate that our method achieves significant improvement of classification performance on various popular CNN architectures (VGG, ResNet, ResNeXt, WideResNet, etc.). Furthermore, the proposed method can expedite the convergence of learning with improved stability. Our code will be available on Github.
The transformer based model (e.g., FusingTF) has been employed recently for Electrocardiogram (ECG) signal classification. However, the high-dimensional embedding obtained via 1-D convolution and positional encoding can lead to the loss of the signal's own temporal information and a large amount of training parameters. In this paper, we propose a new method for ECG classification, called low-dimensional denoising embedding transformer (LDTF), which contains two components, i.e., low-dimensional denoising embedding (LDE) and transformer learning. In the LDE component, a low-dimensional representation of the signal is obtained in the time-frequency domain while preserving its own temporal information. And with the low dimensional embedding, the transformer learning is then used to obtain a deeper and narrower structure with fewer training parameters than that of the FusingTF. Experiments conducted on the MIT-BIH dataset demonstrates the effectiveness and the superior performance of our proposed method, as compared with state-of-the-art methods.
In this paper, we present SpecAugment++, a novel data augmentation method for deep neural networks based acoustic scene classification (ASC). Different from other popular data augmentation methods such as SpecAugment and mixup that only work on the input space, SpecAugment++ is applied to both the input space and the hidden space of the deep neural networks to enhance the input and the intermediate feature representations. For an intermediate hidden state, the augmentation techniques consist of masking blocks of frequency channels and masking blocks of time frames, which improve generalization by enabling a model to attend not only to the most discriminative parts of the feature, but also the entire parts. Apart from using zeros for masking, we also examine two approaches for masking based on the use of other samples within the minibatch, which helps introduce noises to the networks to make them more discriminative for classification. The experimental results on the DCASE 2018 Task1 dataset and DCASE 2019 Task1 dataset show that our proposed method can obtain 3.6% and 4.7% accuracy gains over a strong baseline without augmentation (i.e. CP-ResNet) respectively, and outperforms other previous data augmentation methods.
Image analysis is an essential field for several topics in the life sciences, such as biology or botany. In particular, the analysis of seeds (e.g. fossil research) can provide significant information on their evolution, the history of agriculture, plant domestication and knowledge of diets in ancient times. This work aims to present software that performs image analysis for feature extraction and classification from images containing seeds through a novel and unique framework. In detail, we propose two plugins \emph{ImageJ}, one able to extract morphological, textual and colour features from seed images, and another to classify seeds into categories using the extracted features. The experimental results demonstrated the correctness and validity of both the extracted features and the classification predictions. The proposed tool is easily extendable to other fields of image analysis.
Cerebral hematoma grows rapidly in 6-24 hours and misprediction of the growth can be fatal if it is not operated by a brain surgeon. There are two types of cerebral hematomas: one that grows rapidly and the other that does not grow rapidly. We are developing the technique of artificial intelligence to determine whether the CT image includes the cerebral hematoma which leads to the rapid growth. This problem has various difficulties: the few positive cases in this classification problem of cerebral hematoma and the targeted hematoma has deformable object. Other difficulties include the imbalance classification, the covariate shift, the small data, and the spurious correlation problems. It is difficult with the plain CNN classification such as VGG. This paper proposes the joint learning of semantic segmentation and classification and evaluate the performance of this.
Deep Neural Networks (DNNs) are getting increasing attention to deal with Land Cover Classification (LCC) relying on Satellite Image Time Series (SITS). Though high performances can be achieved, the rationale of a prediction yielded by a DNN often remains unclear. An architecture expressing predictions with respect to input channels is thus proposed in this paper. It relies on convolutional layers and an attention mechanism weighting the importance of each channel in the final classification decision. The correlation between channels is taken into account to set up shared kernels and lower model complexity. Experiments based on a Sentinel-2 SITS show promising results.
A common classification task situation is where one has a large amount of data available for training, but only a small portion is annotated with class labels. The goal of semi-supervised training, in this context, is to improve classification accuracy by leverage information not only from labeled data but also from a large amount of unlabeled data. Recent works have developed significant improvements by exploring the consistency constrain between differently augmented labeled and unlabeled data. Following this path, we propose a novel unsupervised objective that focuses on the less studied relationship between the high confidence unlabeled data that are similar to each other. The new proposed Pair Loss minimizes the statistical distance between high confidence pseudo labels with similarity above a certain threshold. Combining the Pair Loss with the techniques developed by the MixMatch family, our proposed SimPLE algorithm shows significant performance gains over previous algorithms on CIFAR-100 and Mini-ImageNet, and is on par with the state-of-the-art methods on CIFAR-10 and SVHN. Furthermore, SimPLE also outperforms the state-of-the-art methods in the transfer learning setting, where models are initialized by the weights pre-trained on ImageNet or DomainNet-Real. The code is available at github.com/zijian-hu/SimPLE.
Learning robust representations to discriminate cell phenotypes based on microscopy images is important for drug discovery. Drug development efforts typically analyse thousands of cell images to screen for potential treatments. Early works focus on creating hand-engineered features from these images or learn such features with deep neural networks in a fully or weakly-supervised framework. Both require prior knowledge or labelled datasets. Therefore, subsequent works propose unsupervised approaches based on generative models to learn these representations. Recently, representations learned with self-supervised contrastive loss-based methods have yielded state-of-the-art results on various imaging tasks compared to earlier unsupervised approaches. In this work, we leverage a contrastive learning framework to learn appropriate representations from single-cell fluorescent microscopy images for the task of Mechanism-of-Action classification. The proposed work is evaluated on the annotated BBBC021 dataset, and we obtain state-of-the-art results in NSC, NCSB and drop metrics for an unsupervised approach. We observe an improvement of 10% in NCSB accuracy and 11% in NSC-NSCB drop over the previously best unsupervised method. Moreover, the performance of our unsupervised approach ties with the best supervised approach. Additionally, we observe that our framework performs well even without post-processing, unlike earlier methods. With this, we conclude that one can learn robust cell representations with contrastive learning.
This paper presents a detection-aware pre-training (DAP) approach, which leverages only weakly-labeled classification-style datasets (e.g., ImageNet) for pre-training, but is specifically tailored to benefit object detection tasks. In contrast to the widely used image classification-based pre-training (e.g., on ImageNet), which does not include any location-related training tasks, we transform a classification dataset into a detection dataset through a weakly supervised object localization method based on Class Activation Maps to directly pre-train a detector, making the pre-trained model location-aware and capable of predicting bounding boxes. We show that DAP can outperform the traditional classification pre-training in terms of both sample efficiency and convergence speed in downstream detection tasks including VOC and COCO. In particular, DAP boosts the detection accuracy by a large margin when the number of examples in the downstream task is small.
Recently, there are unprecedented data growth originating from different online platforms which contribute to big data in terms of volume, velocity, variety and veracity (4Vs). Given this nature of big data which is unstructured, performing analytics to extract meaningful information is currently a great challenge to big data analytics. Collecting and analyzing unstructured textual data allows decision makers to study the escalation of comments/posts on our social media platforms. Hence, there is need for automatic big data analysis to overcome the noise and the non-reliability of these unstructured dataset from the digital media platforms. However, current machine learning algorithms used are performance driven focusing on the classification/prediction accuracy based on known properties learned from the training samples. With the learning task in a large dataset, most machine learning models are known to require high computational cost which eventually leads to computational complexity. In this work, two supervised machine learning algorithms are combined with text mining techniques to produce a hybrid model which consists of Na\"ive Bayes and support vector machines (SVM). This is to increase the efficiency and accuracy of the results obtained and also to reduce the computational cost and complexity. The system also provides an open platform where a group of persons with a common interest can share their comments/messages and these comments classified automatically as legal or illegal. This improves the quality of conversation among users. The hybrid model was developed using WEKA tools and Java programming language. The result shows that the hybrid model gave 96.76% accuracy as against the 61.45% and 69.21% of the Na\"ive Bayes and SVM models respectively.
Despite recent advances in representation learning in hypercomplex (HC) space, this subject is still vastly unexplored in the context of graphs. Motivated by the complex and quaternion algebras, which have been found in several contexts to enable effective representation learning that inherently incorporates a weight-sharing mechanism, we develop graph neural networks that leverage the properties of hypercomplex feature transformation. In particular, in our proposed class of models, the multiplication rule specifying the algebra itself is inferred from the data during training. Given a fixed model architecture, we present empirical evidence that our proposed model incorporates a regularization effect, alleviating the risk of overfitting. We also show that for fixed model capacity, our proposed method outperforms its corresponding real-formulated GNN, providing additional confirmation for the enhanced expressivity of HC embeddings. Finally, we test our proposed hypercomplex GNN on several open graph benchmark datasets and show that our models reach state-of-the-art performance while consuming a much lower memory footprint with 70& fewer parameters. Our implementations are available at https://github.com/bayer-science-for-a-better-life/phc-gnn.
Decision trees are among the most popular machine learning models and are used routinely in applications ranging from revenue management and medicine to bioinformatics. In this paper, we consider the problem of learning optimal binary classification trees with univariate splits. Literature on the topic has burgeoned in recent years, motivated both by the empirical suboptimality of heuristic approaches and the tremendous improvements in mixed-integer optimization (MIO) technology. Yet, existing MIO-based approaches from the literature do not leverage the power of MIO to its full extent: they rely on weak formulations, resulting in slow convergence and large optimality gaps. To fill this gap in the literature, we propose an intuitive flow-based MIO formulation for learning optimal binary classification trees. Our formulation can accommodate side constraints to enable the design of interpretable and fair decision trees. Moreover, we show that our formulation has a stronger linear optimization relaxation than existing methods in the case of binary data. We exploit the decomposable structure of our formulation and max-flow/min-cut duality to derive a Benders' decomposition method to speed-up computation. We propose a tailored procedure for solving each decomposed subproblem that provably generates facets of the feasible set of the MIO as constraints to add to the main problem. We conduct extensive computational experiments on standard benchmark datasets on which we show that our proposed approaches are 29 times faster than state-of-the-art MIO-based techniques and improve out-of-sample performance by up to 8%.
Many high performance machine learning models for Aspect-Based Sentiment Classification (ABSC) produce black box models, and therefore barely explain how they classify a certain sentiment value towards an aspect. In this paper, we propose explanation models, that inspect the internal dynamics of a state-of-the-art neural attention model, the LCR-Rot-hop, by using a technique called Diagnostic Classification. Our diagnostic classifier is a simple neural network, which evaluates whether the internal layers of the LCR-Rot-hop model encode useful word information for classification, i.e., the part of speech, the sentiment value, the presence of aspect relation, and the aspect-related sentiment value of words. We conclude that the lower layers in the LCR-Rot-hop model encode the part of speech and the sentiment value, whereas the higher layers represent the presence of a relation with the aspect and the aspect-related sentiment value of words.
Cancer is responsible for millions of deaths worldwide every year. Although significant progress has been achieved in cancer medicine, many issues remain to be addressed for improving cancer therapy. Appropriate cancer patient stratification is the prerequisite for selecting appropriate treatment plan, as cancer patients are of known heterogeneous genetic make-ups and phenotypic differences. In this study, built upon deep phenotypic characterizations extractable from Mayo Clinic electronic health records (EHRs) and genetic test reports for a collection of cancer patients, we developed a system leveraging a joint of phenotypic and genetic features for cancer patient subgrouping. The workflow is roughly divided into three parts: feature preprocessing, cancer patient classification, and cancer patient clustering based. In feature preprocessing step, we performed filtering, retaining the most relevant features. In cancer patient classification, we utilized joint categorical features to build a patient-feature matrix and applied nine different machine learning models, Random Forests (RF), Decision Tree (DT), Support Vector Machine (SVM), Naive Bayes (NB), Logistic Regression (LR), Multilayer Perceptron (MLP), Gradient Boosting (GB), Convolutional Neural Network (CNN), and Feedforward Neural Network (FNN), for classification purposes. Finally, in the cancer patient clustering step, we leveraged joint embeddings features and patient-feature associations to build an undirected feature graph and then trained the cancer feature node embeddings.
Active learning aims to reduce labeling costs by selecting only the most informative samples on a dataset. Few existing works have addressed active learning for object detection. Most of these methods are based on multiple models or are straightforward extensions of classification methods, hence estimate an image's informativeness using only the classification head. In this paper, we propose a novel deep active learning approach for object detection. Our approach relies on mixture density networks that estimate a probabilistic distribution for each localization and classification head's output. We explicitly estimate the aleatoric and epistemic uncertainty in a single forward pass of a single model. Our method uses a scoring function that aggregates these two types of uncertainties for both heads to obtain every image's informativeness score. We demonstrate the efficacy of our approach in PASCAL VOC and MS-COCO datasets. Our approach outperforms single-model based methods and performs on par with multi-model based methods at a fraction of the computing cost.
Environmental sound analysis is currently getting more and more attentions. In the domain, acoustic scene classification and acoustic event classification are two closely related tasks. In this letter, a two-stage method is proposed for the above tasks. In the first stage, a mixup based MTL solution is proposed to classify both tasks in one single convolutional neural network. Artificial multi-label samples are used in the training of the MTL model, which are mixed up using existing single-task datasets. The multi-task model obtained can effectively recognize both the acoustic scenes and events. Compared with other methods such as re-annotation or synthesis, the mixup based MTL is low-cost, flexible and effective. In the second stage, the MTL model is modified into a single-task model which is fine-tuned using the original dataset corresponding to the specific task. By controlling the frozen layers carefully, the task-specific high level features are fused and the performance of the single classification task is further improved. The proposed method has confirmed the complementary characteristics of acoustic scene and acoustic event classifications. Finally, enhanced by ensemble learning, a satisfactory accuracy of 84.5 percent on TUT acoustic scene 2017 dataset and an accuracy of 77.5 percent on ESC-50 dataset are achieved respectively.
Few-shot classification studies the problem of quickly adapting a deep learner to understanding novel classes based on few support images. In this context, recent research efforts have been aimed at designing more and more complex classifiers that measure similarities between query and support images, but left the importance of feature embeddings seldom explored. We show that the reliance on sophisticated classifiers is not necessary, and a simple classifier applied directly to improved feature embeddings can instead outperform most of the leading methods in the literature. To this end, we present a new method named \textbf{DCAP} for few-shot classification, in which we investigate how one can improve the quality of embeddings by leveraging \textbf{D}ense \textbf{C}lassification and \textbf{A}ttentive \textbf{P}ooling. Specifically, we propose to train a learner on base classes with abundant samples to solve dense classification problem first and then meta-train the learner on a bunch of randomly sampled few-shot tasks to adapt it to few-shot scenario or the test time scenario. During meta-training, we suggest to pool feature maps by applying attentive pooling instead of the widely used global average pooling (GAP) to prepare embeddings for few-shot classification. Attentive pooling learns to reweight local descriptors, explaining what the learner is looking for as evidence for decision making. Experiments on two benchmark datasets show the proposed method to be superior in multiple few-shot settings while being simpler and more explainable. Code is available at: \url{https://github.com/Ukeyboard/dcap/}.
Recent progress in self-supervised learning has resulted in models that are capable of extracting rich representations from image collections without requiring any explicit label supervision. However, to date the vast majority of these approaches have restricted themselves to training on standard benchmark datasets such as ImageNet. We argue that fine-grained visual categorization problems, such as plant and animal species classification, provide an informative testbed for self-supervised learning. In order to facilitate progress in this area we present two new natural world visual classification datasets, iNat2021 and NeWT. The former consists of 2.7M images from 10k different species uploaded by users of the citizen science application iNaturalist. We designed the latter, NeWT, in collaboration with domain experts with the aim of benchmarking the performance of representation learning algorithms on a suite of challenging natural world binary classification tasks that go beyond standard species classification. These two new datasets allow us to explore questions related to large-scale representation and transfer learning in the context of fine-grained categories. We provide a comprehensive analysis of feature extractors trained with and without supervision on ImageNet and iNat2021, shedding light on the strengths and weaknesses of different learned features across a diverse set of tasks. We find that features produced by standard supervised methods still outperform those produced by self-supervised approaches such as SimCLR. However, improved self-supervised learning methods are constantly being released and the iNat2021 and NeWT datasets are a valuable resource for tracking their progress.
There is a growing interest in shape analysis in recent years. We present a novel shape signature for 2D bounded simply-connected domains, named the Harmonic Beltrami signature (HBS). The proposed signature is based on the harmonic extension of the conformal welding map of a unit circle and its Beltrami coefficient. We show that there is a one-to-one correspondence between the quotient space of HBS and the space of 2D simply-connected shapes up to a translation, rotation and scaling. With a suitable normalization, each equivalence class in the quotient space of HBS is associated to a unique representative. It gets rid of the conformal ambiguity. As such, each shape is associated to a unique HBS. Conversely, the associated shape of a HBS can be reconstructed based on quasiconformal Teichmuller theories, which is uniquely determined up to a translation, rotation and scaling. The HBS is thus an effective fingerprint to represent a 2D shape. The robustness of HBS is studied both theoretically and experimentally. With the HBS, simple metric, such as L2, can be used to measure geometric dissimilarity between shapes. Experiments have been carried out to classify shapes in different classes using HBS. Results show good classification performance, which demonstrate the efficacy of our proposed shape signature.