Doob's Lagrangian: A Sample-Efficient Variational Approach to Transition Path Sampling
원문 초록
Rare event sampling in dynamical systems is a fundamental problem arising in the natural sciences, which poses significant computational challenges due to an exponentially large space of trajectories. For settings where the dynamical system of interest follows a Brownian motion with known drift, the question of conditioning the process to reach a given endpoint or desired rare event is definitively answered by Doob's h-transform. However, the naive estimation of this transform is infeasible, as it requires simulating sufficiently many forward trajectories to estimate rare event probabilities. In this work, we propose a variational formulation of Doob's h-transform as an optimization problem over trajectories between a given initial point and the desired ending point. To solve this optimization, we propose a simulation-free training objective with a model parameterization that imposes the desired boundary conditions by design. Our approach significantly reduces the search space over trajectories and avoids expensive trajectory simulation and inefficient importance sampling estimators which are required in existing methods. We demonstrate the ability of our method to find feasible transition paths on real-world molecular simulation and protein folding tasks.
함께 살펴볼 논문
공통 태그를 근거로 연결했습니다. 실제 인용 관계나 논문의 우수성을 뜻하지 않습니다.
MegaFold: System-Level Optimizations for Accelerating Protein Structure Prediction Models
Probably Approximately Correct Labels
ReQFlow: Rectified Quaternion Flow for Efficient and High-Quality Protein Backbone Generation
PyMOLfold: Interactive Protein and Ligand Structure Prediction in PyMOL
Mask prior-guided denoising diffusion improves inverse protein folding
Bridge-IF: Learning Inverse Protein Folding with Markov Bridges
토론
이 논문과 연결된 포럼 글이 아직 없습니다.