L+M-24: Building a Dataset for Language + Molecules @ ACL 2024
원문 초록
Language-molecule models have emerged as an exciting direction for molecular discovery and understanding. However, training these models is challenging due to the scarcity of molecule-language pair datasets. At this point, datasets have been released which are 1) small and scraped from existing databases, 2) large but noisy and constructed by performing entity linking on the scientific literature, and 3) built by converting property prediction datasets to natural language using templates. In this document, we detail the $\textit{L+M-24}$ dataset, which has been created for the Language + Molecules Workshop shared task at ACL 2024. In particular, $\textit{L+M-24}$ is designed to focus on three key benefits of natural language in molecule design: compositionality, functionality, and abstraction.
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Descriptor-based Foundation Models for Molecular Property Prediction
Equivariance Everywhere All At Once: A Recipe for Graph Foundation Models
Robust Molecular Property Prediction via Densifying Scarce Labeled Data
The Catechol Benchmark: Time-series Solvent Selection Data for Few-shot Machine Learning
Positional Encoding meets Persistent Homology on Graphs
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