Readmissions among Medicare beneficiaries are a major problem for the US healthcare system from a perspective of both healthcare operations and patient caregiving outcomes. Our study analyzes Medicare hospital readmissions using LSTM networks with feature engineering to assess feature contributions. We selected variables from admission-level data, inpatient medical history and patient demography. The LSTM model is designed to capture temporal dynamics from admission-level and patient-level data. On a case study on the MIMIC dataset, the LSTM model outperformed the logistic regression baseline, accurately leveraging temporal features to predict readmission. The major features were the Charlson Comorbidity Index, hospital length of stay, the hospital admissions over the past 6 months, while demographic variables were less impactful. This work suggests that LSTM networks offers a more promising approach to improve Medicare patient readmission prediction. It captures temporal interactions in patient databases, enhancing current prediction models for healthcare providers. Adoption of predictive models into clinical practice may be more effective in identifying Medicare patients to provide early and targeted interventions to improve patient outcomes.
The increasing integration of machine learning across various domains has underscored the necessity for accessible systems that non-experts can utilize effectively. To address this need, the field of automated machine learning (AutoML) has developed tools to simplify the construction and optimization of ML pipelines. However, existing AutoML solutions often lack efficiency in creating online pipelines and ease of use for Human-Computer Interaction (HCI) applications. Therefore, in this paper, we introduce AdaptoML-UX, an adaptive framework that incorporates automated feature engineering, machine learning, and incremental learning to assist non-AI experts in developing robust, user-centered ML models. Our toolkit demonstrates the capability to adapt efficiently to diverse problem domains and datasets, particularly in HCI, thereby reducing the necessity for manual experimentation and conserving time and resources. Furthermore, it supports model personalization through incremental learning, customizing models to individual user behaviors. HCI researchers can employ AdaptoML-UX (\url{https://github.com/MichaelSargious/AdaptoML_UX}) without requiring specialized expertise, as it automates the selection of algorithms, feature engineering, and hyperparameter tuning based on the unique characteristics of the data.
Tabular machine learning problems often require time-consuming and labor-intensive feature engineering. Recent efforts have focused on using large language models (LLMs) to capitalize on their potential domain knowledge. At the same time, researchers have observed ethically concerning negative biases in other LLM-related use cases, such as text generation. These developments motivated us to investigate whether LLMs exhibit a bias that negatively impacts the performance of feature engineering. While not ethically concerning, such a bias could hinder practitioners from fully utilizing LLMs for automated data science. Therefore, we propose a method to detect potential biases by detecting anomalies in the frequency of operators (e.g., adding two features) suggested by LLMs when engineering new features. Our experiments evaluate the bias of four LLMs, two big frontier and two small open-source models, across 27 tabular datasets. Our results indicate that LLMs are biased toward simple operators, such as addition, and can fail to utilize more complex operators, such as grouping followed by aggregations. Furthermore, the bias can negatively impact the predictive performance when using LLM-generated features. Our results call for mitigating bias when using LLMs for feature engineering.
Crafting effective features is a crucial yet labor-intensive and domain-specific task within machine learning pipelines. Fortunately, recent advancements in Large Language Models (LLMs) have shown promise in automating various data science tasks, including feature engineering. But despite this potential, evaluations thus far are primarily based on the end performance of a complete ML pipeline, providing limited insight into precisely how LLMs behave relative to human experts in feature engineering. To address this gap, we propose ELF-Gym, a framework for Evaluating LLM-generated Features. We curated a new dataset from historical Kaggle competitions, including 251 "golden" features used by top-performing teams. ELF-Gym then quantitatively evaluates LLM-generated features by measuring their impact on downstream model performance as well as their alignment with expert-crafted features through semantic and functional similarity assessments. This approach provides a more comprehensive evaluation of disparities between LLMs and human experts, while offering valuable insights into specific areas where LLMs may have room for improvement. For example, using ELF-Gym we empirically demonstrate that, in the best-case scenario, LLMs can semantically capture approximately 56% of the golden features, but at the more demanding implementation level this overlap drops to 13%. Moreover, in other cases LLMs may fail completely, particularly on datasets that require complex features, indicating broad potential pathways for improvement.
This paper evaluates the performance of Large Language Models (LLMs) in authorship attribution and authorship verification tasks for Latin texts of the Patristic Era. The study showcases that LLMs can be robust in zero-shot authorship verification even on short texts without sophisticated feature engineering. Yet, the models can also be easily "mislead" by semantics. The experiments also demonstrate that steering the model's authorship analysis and decision-making is challenging, unlike what is reported in the studies dealing with high-resource modern languages. Although LLMs prove to be able to beat, under certain circumstances, the traditional baselines, obtaining a nuanced and truly explainable decision requires at best a lot of experimentation.
Purpose: We introduce a novel methodology for voice pathology detection using the publicly available Saarbr\"ucken Voice Database (SVD) and a robust feature set combining commonly used acoustic handcrafted features with two novel ones: pitch difference (relative variation in fundamental frequency) and NaN feature (failed fundamental frequency estimation). Methods: We evaluate six machine learning (ML) algorithms -- support vector machine, k-nearest neighbors, naive Bayes, decision tree, random forest, and AdaBoost -- using grid search for feasible hyperparameters and 20480 different feature subsets. Top 1000 classification models -- feature subset combinations for each ML algorithm are validated with repeated stratified cross-validation. To address class imbalance, we apply K-Means SMOTE to augment the training data. Results: Our approach achieves 85.61%, 84.69% and 85.22% unweighted average recall (UAR) for females, males and combined results respectively. We intentionally omit accuracy as it is a highly biased metric for imbalanced data. Conclusion: Our study demonstrates that by following the proposed methodology and feature engineering, there is a potential in detection of various voice pathologies using ML models applied to the simplest vocal task, a sustained utterance of the vowel /a:/. To enable easier use of our methodology and to support our claims, we provide a publicly available GitHub repository with DOI 10.5281/zenodo.13771573. Finally, we provide a REFORMS checklist to enhance readability, reproducibility and justification of our approach
Web attacks are one of the major and most persistent forms of cyber threats, which bring huge costs and losses to web application-based businesses. Various detection methods, such as signature-based, machine learning-based, and deep learning-based, have been proposed to identify web attacks. However, these methods either (1) heavily rely on accurate and complete rule design and feature engineering, which may not adapt to fast-evolving attacks, or (2) fail to estimate model uncertainty, which is essential to the trustworthiness of the prediction made by the model. In this study, we proposed an Uncertainty-aware Ensemble Deep Kernel Learning (UEDKL) model to detect web attacks from HTTP request payload data with the model uncertainty captured from the perspective of both data distribution and model parameters. The proposed UEDKL utilizes a deep kernel learning model to distinguish normal HTTP requests from different types of web attacks with model uncertainty estimated from data distribution perspective. Multiple deep kernel learning models were trained as base learners to capture the model uncertainty from model parameters perspective. An attention-based ensemble learning approach was designed to effectively integrate base learners' predictions and model uncertainty. We also proposed a new metric named High Uncertainty Ratio-F Score Curve to evaluate model uncertainty estimation. Experiments on BDCI and SRBH datasets demonstrated that the proposed UEDKL framework yields significant improvement in both web attack detection performance and uncertainty estimation quality compared to benchmark models.
Representation learning is a pivotal area in the field of machine learning, focusing on the development of methods to automatically discover the representations or features needed for a given task from raw data. Unlike traditional feature engineering, which requires manual crafting of features, representation learning aims to learn features that are more useful and relevant for tasks such as classification, prediction, and clustering. We introduce Principal Orthogonal Latent Components Analysis Network (POLCA Net), an approach to mimic and extend PCA and LDA capabilities to non-linear domains. POLCA Net combines an autoencoder framework with a set of specialized loss functions to achieve effective dimensionality reduction, orthogonality, variance-based feature sorting, high-fidelity reconstructions, and additionally, when used with classification labels, a latent representation well suited for linear classifiers and low dimensional visualization of class distribution as well.
With the growing importance of customer service in contemporary business, recognizing the intents behind service dialogues has become essential for the strategic success of enterprises. However, the nature of dialogue data varies significantly across different scenarios, and implementing an intent parser for a specific domain often involves tedious feature engineering and a heavy workload of data labeling. In this paper, we propose a novel Neural-Bayesian Program Learning model named Dialogue-Intent Parser (DI-Parser), which specializes in intent parsing under data-hungry settings and offers promising performance improvements. DI-Parser effectively utilizes data from multiple sources in a "Learning to Learn" manner and harnesses the "wisdom of the crowd" through few-shot learning capabilities on human-annotated datasets. Experimental results demonstrate that DI-Parser outperforms state-of-the-art deep learning models and offers practical advantages for industrial-scale applications.
Objective: To improve prediction of Chronic Kidney Disease (CKD) progression to End Stage Renal Disease (ESRD) using machine learning (ML) and deep learning (DL) models applied to an integrated clinical and claims dataset of varying observation windows, supported by explainable AI (XAI) to enhance interpretability and reduce bias. Materials and Methods: We utilized data about 10,326 CKD patients, combining their clinical and claims information from 2009 to 2018. Following data preprocessing, cohort identification, and feature engineering, we evaluated multiple statistical, ML and DL models using data extracted from five distinct observation windows. Feature importance and Shapley value analysis were employed to understand key predictors. Models were tested for robustness, clinical relevance, misclassification errors and bias issues. Results: Integrated data models outperformed those using single data sources, with the Long Short-Term Memory (LSTM) model achieving the highest AUC (0.93) and F1 score (0.65). A 24-month observation window was identified as optimal for balancing early detection and prediction accuracy. The 2021 eGFR equation improved prediction accuracy and reduced racial bias, notably for African American patients. Discussion: Improved ESRD prediction accuracy, results interpretability and bias mitigation strategies presented in this study have the potential to significantly enhance CKD and ESRD management, support targeted early interventions and reduce healthcare disparities. Conclusion: This study presents a robust framework for predicting ESRD outcomes in CKD patients, improving clinical decision-making and patient care through multi-sourced, integrated data and AI/ML methods. Future research will expand data integration and explore the application of this framework to other chronic diseases.
The ability to think abstractly and reason by analogy is a prerequisite to rapidly adapt to new conditions, tackle newly encountered problems by decomposing them, and synthesize knowledge to solve problems comprehensively. We present TransCoder, a method for solving abstract problems based on neural program synthesis, and conduct a comprehensive analysis of decisions made by the generative module of the proposed architecture. At the core of TransCoder is a typed domain-specific language, designed to facilitate feature engineering and abstract reasoning. In training, we use the programs that failed to solve tasks to generate new tasks and gather them in a synthetic dataset. As each synthetic task created in this way has a known associated program (solution), the model is trained on them in supervised mode. Solutions are represented in a transparent programmatic form, which can be inspected and verified. We demonstrate TransCoder's performance using the Abstract Reasoning Corpus dataset, for which our framework generates tens of thousands of synthetic problems with corresponding solutions and facilitates systematic progress in learning.
The quality of Machine Learning (ML) models strongly depends on the input data, as such generating high-quality features is often required to improve the predictive accuracy. This process is referred to as Feature Engineering (FE). However, since manual feature engineering is time-consuming and requires case-by-case domain knowledge, Automated Feature Engineering (AutoFE) is crucial. A major challenge that remains is to generate interpretable features. To tackle this problem, we introduce SMART, a hybrid approach that uses semantic technologies to guide the generation of interpretable features through a two-step process: Exploitation and Exploration. The former uses Description Logics (DL) to reason on the semantics embedded in Knowledge Graphs (KG) to infer domain-specific features, while the latter exploits the knowledge graph to conduct a guided exploration of the search space through Deep Reinforcement Learning (DRL). Our experiments on public datasets demonstrate that SMART significantly improves prediction accuracy while ensuring a high level of interpretability.
The increasing demand for transparent and reliable models, particularly in high-stakes decision-making areas such as medical image analysis, has led to the emergence of eXplainable Artificial Intelligence (XAI). Post-hoc XAI techniques, which aim to explain black-box models after training, have raised concerns about their fidelity to model predictions. In contrast, Self-eXplainable AI (S-XAI) offers a compelling alternative by incorporating explainability directly into the training process of deep learning models. This approach allows models to generate inherent explanations that are closely aligned with their internal decision-making processes, enhancing transparency and supporting the trustworthiness, robustness, and accountability of AI systems in real-world medical applications. To facilitate the development of S-XAI methods for medical image analysis, this survey presents a comprehensive review across various image modalities and clinical applications. It covers more than 200 papers from three key perspectives: 1) input explainability through the integration of explainable feature engineering and knowledge graph, 2) model explainability via attention-based learning, concept-based learning, and prototype-based learning, and 3) output explainability by providing textual and counterfactual explanations. This paper also outlines desired characteristics of explainability and evaluation methods for assessing explanation quality, while discussing major challenges and future research directions in developing S-XAI for medical image analysis.
Deductive coding is a common discourse analysis method widely used by learning science and learning analytics researchers for understanding teaching and learning interactions. It often requires researchers to manually label all discourses to be analyzed according to a theoretically guided coding scheme, which is time-consuming and labor-intensive. The emergence of large language models such as GPT has opened a new avenue for automatic deductive coding to overcome the limitations of traditional deductive coding. To evaluate the usefulness of large language models in automatic deductive coding, we employed three different classification methods driven by different artificial intelligence technologies, including the traditional text classification method with text feature engineering, BERT-like pretrained language model and GPT-like pretrained large language model (LLM). We applied these methods to two different datasets and explored the potential of GPT and prompt engineering in automatic deductive coding. By analyzing and comparing the accuracy and Kappa values of these three classification methods, we found that GPT with prompt engineering outperformed the other two methods on both datasets with limited number of training samples. By providing detailed prompt structures, the reported work demonstrated how large language models can be used in the implementation of automatic deductive coding.
Classification tasks are typically handled using Machine Learning (ML) models, which lack a balance between accuracy and interpretability. This paper introduces a new approach for classification tasks using Large Language Models (LLMs) in an explainable method. Unlike ML models, which rely heavily on data cleaning and feature engineering, this method streamlines the process using LLMs. This paper proposes a method called "Language Model Learning (LML)" powered by a new method called "Data-Augmented Prediction (DAP)." The classification is performed by LLMs using a method similar to that used by humans who manually explore and understand the data to decide classifications. In the process of LML, a dataset is summarized and evaluated to determine the features leading to each label the most. In the DAP process, the system uses the data summary and a row of the testing dataset to automatically generate a query to retrieve relevant rows from the dataset for context-aware classification. LML and DAP unlock new possibilities in areas that require explainable and context-aware decisions by ensuring satisfactory accuracy even with complex data. The system scored an accuracy above 90% in some test cases, confirming the effectiveness and potential of the system to outperform ML models in various scenarios. The source code is available at https://github.com/Pro-GenAI/LML-DAP
Network Intrusion Detection Systems (NIDS) are essential for protecting computer networks from malicious activities, including Denial of Service (DoS), Probing, User-to-Root (U2R), and Remote-to-Local (R2L) attacks. Without effective NIDS, networks are vulnerable to significant security breaches and data loss. Machine learning techniques provide a promising approach to enhance NIDS by automating threat detection and improving accuracy. In this research, we propose an Enhanced Convolutional Neural Network (EnCNN) for NIDS and evaluate its performance using the KDDCUP'99 dataset. Our methodology includes comprehensive data preprocessing, exploratory data analysis (EDA), and feature engineering. We compare EnCNN with various machine learning algorithms, including Logistic Regression, Decision Trees, Support Vector Machines (SVM), and ensemble methods like Random Forest, AdaBoost, and Voting Ensemble. The results show that EnCNN significantly improves detection accuracy, with a notable 10% increase over state-of-art approaches. This demonstrates the effectiveness of EnCNN in real-time network intrusion detection, offering a robust solution for identifying and mitigating security threats, and enhancing overall network resilience.
Polymer property performance prediction aims to forecast specific features or attributes of polymers, which has become an efficient approach to measuring their performance. However, existing machine learning models face challenges in effectively learning polymer representations due to low-quality polymer datasets, which consequently impact their overall performance. This study focuses on improving polymer property performance prediction tasks by reconstructing an optimal and explainable descriptor representation space. Nevertheless, prior research such as feature engineering and representation learning can only partially solve this task since they are either labor-incentive or unexplainable. This raises two issues: 1) automatic transformation and 2) explainable enhancement. To tackle these issues, we propose our unique Traceable Group-wise Reinforcement Generation Perspective. Specifically, we redefine the reconstruction of the representation space into an interactive process, combining nested generation and selection. Generation creates meaningful descriptors, and selection eliminates redundancies to control descriptor sizes. Our approach employs cascading reinforcement learning with three Markov Decision Processes, automating descriptor and operation selection, and descriptor crossing. We utilize a group-wise generation strategy to explore and enhance reward signals for cascading agents. Ultimately, we conduct experiments to indicate the effectiveness of our proposed framework.
In ideal human computer interaction (HCI), the colloquial form of a language would be preferred by most users, since it is the form used in their day-to-day conversations. However, there is also an undeniable necessity to preserve the formal literary form. By embracing the new and preserving the old, both service to the common man (practicality) and service to the language itself (conservation) can be rendered. Hence, it is ideal for computers to have the ability to accept, process, and converse in both forms of the language, as required. To address this, it is first necessary to identify the form of the input speech, which in the current work is between literary and colloquial Tamil speech. Such a front-end system must consist of a simple, effective, and lightweight classifier that is trained on a few effective features that are capable of capturing the underlying patterns of the speech signal. To accomplish this, a one-dimensional convolutional neural network (1D-CNN) that learns the envelope of features across time, is proposed. The network is trained on a select number of handcrafted features initially, and then on Mel frequency cepstral coefficients (MFCC) for comparison. The handcrafted features were selected to address various aspects of speech such as the spectral and temporal characteristics, prosody, and voice quality. The features are initially analyzed by considering ten parallel utterances and observing the trend of each feature with respect to time. The proposed 1D-CNN, trained using the handcrafted features, offers an F1 score of 0.9803, while that trained on the MFCC offers an F1 score of 0.9895. In light of this, feature ablation and feature combination are explored. When the best ranked handcrafted features, from the feature ablation study, are combined with the MFCC, they offer the best results with an F1 score of 0.9946.
While deep learning has reduced the prevalence of manual feature extraction, transformation of data via feature engineering remains essential for improving model performance, particularly for underwater acoustic signals. The methods by which audio signals are converted into time-frequency representations and the subsequent handling of these spectrograms can significantly impact performance. This work demonstrates the performance impact of using different combinations of time-frequency features in a histogram layer time delay neural network. An optimal set of features is identified with results indicating that specific feature combinations outperform single data features.
The automated and timely conversion of cybersecurity information from unstructured online sources, such as blogs and articles to more formal representations has become a necessity for many applications in the domain nowadays. Named Entity Recognition (NER) is one of the early phases towards this goal. It involves the detection of the relevant domain entities, such as product, version, attack name, etc. in technical documents. Although generally considered a simple task in the information extraction field, it is quite challenging in some domains like cybersecurity because of the complex structure of its entities. The state of the art methods require time-consuming and labor intensive feature engineering that describes the properties of the entities, their context, domain knowledge, and linguistic characteristics. The model demonstrated in this paper is domain independent and does not rely on any features specific to the entities in the cybersecurity domain, hence does not require expert knowledge to perform feature engineering. The method used relies on a type of recurrent neural networks called Long Short-Term Memory (LSTM) and the Conditional Random Fields (CRFs) method. The results we obtained showed that this method outperforms the state of the art methods given an annotated corpus of a decent size.