Knowledge graphs represent real-world entities and their relations in a semantically-rich structure supported by ontologies. Exploring this data with machine learning methods often relies on knowledge graph embeddings, which produce latent representations of entities that preserve structural and local graph neighbourhood properties, but sacrifice explainability. However, in tasks such as link or relation prediction, understanding which specific features better explain a relation is crucial to support complex or critical applications. We propose SEEK, a novel approach for explainable representations to support relation prediction in knowledge graphs. It is based on identifying relevant shared semantic aspects (i.e., subgraphs) between entities and learning representations for each subgraph, producing a multi-faceted and explainable representation. We evaluate SEEK on two real-world highly complex relation prediction tasks: protein-protein interaction prediction and gene-disease association prediction. Our extensive analysis using established benchmarks demonstrates that SEEK achieves significantly better performance than standard learning representation methods while identifying both sufficient and necessary explanations based on shared semantic aspects.
Entity Linking (EL) is a fundamental task for Information Extraction and Knowledge Graphs. The general form of EL (i.e., end-to-end EL) aims to first find mentions in the given input document and then link the mentions to corresponding entities in a specific knowledge base. Recently, the paradigm of retriever-reader promotes the progress of end-to-end EL, benefiting from the advantages of dense entity retrieval and machine reading comprehension. However, the existing study only trains the retriever and the reader separately in a pipeline manner, which ignores the benefit that the interaction between the retriever and the reader can bring to the task. To advance the retriever-reader paradigm to perform more perfectly on end-to-end EL, we propose BEER$^2$, a Bidirectional End-to-End training framework for Retriever and Reader. Through our designed bidirectional end-to-end training, BEER$^2$ guides the retriever and the reader to learn from each other, make progress together, and ultimately improve EL performance. Extensive experiments on benchmarks of multiple domains demonstrate the effectiveness of our proposed BEER$^2$.
Logical query answering over Knowledge Graphs (KGs) is a fundamental yet complex task. A promising approach to achieve this is to embed queries and entities jointly into the same embedding space. Research along this line suggests that using multi-modal distribution to represent answer entities is more suitable than uni-modal distribution, as a single query may contain multiple disjoint answer subsets due to the compositional nature of multi-hop queries and the varying latent semantics of relations. However, existing methods based on multi-modal distribution roughly represent each subset without capturing its accurate cardinality, or even degenerate into uni-modal distribution learning during the reasoning process due to the lack of an effective similarity measure. To better model queries with diversified answers, we propose Query2GMM for answering logical queries over knowledge graphs. In Query2GMM, we present the GMM embedding to represent each query using a univariate Gaussian Mixture Model (GMM). Each subset of a query is encoded by its cardinality, semantic center and dispersion degree, allowing for precise representation of multiple subsets. Then we design specific neural networks for each operator to handle the inherent complexity that comes with multi-modal distribution while alleviating the cascading errors. Last, we design a new similarity measure to assess the relationships between an entity and a query's multi-answer subsets, enabling effective multi-modal distribution learning for reasoning. Comprehensive experimental results show that Query2GMM outperforms the best competitor by an absolute average of $6.35\%$.
Large Language Models (LLMs) exploit fine-tuning as a technique to adapt to diverse goals, thanks to task-specific training data. Task specificity should go hand in hand with domain orientation, that is, the specialization of an LLM to accurately address the tasks of a given realm of interest. However, models are usually fine-tuned over publicly available data or, at most, over ground data from databases, ignoring business-level definitions and domain experience. On the other hand, Enterprise Knowledge Graphs (EKGs) are able to capture and augment such domain knowledge via ontological reasoning. With the goal of combining LLM flexibility with the domain orientation of EKGs, we propose a novel neurosymbolic architecture that leverages the power of ontological reasoning to build task- and domain-specific corpora for LLM fine-tuning.
Entity linking is an important step towards constructing knowledge graphs that facilitate advanced question answering over scientific documents, including the retrieval of relevant information included in tables within these documents. This paper introduces a general-purpose system for linking entities to items in the Wikidata knowledge base. It describes how we adapt this system for linking domain-specific entities, especially for those entities embedded within tables drawn from COVID-19-related scientific literature. We describe the setup of an efficient offline instance of the system that enables our entity-linking approach to be more feasible in practice. As part of a broader approach to infer the semantic meaning of scientific tables, we leverage the structural and semantic characteristics of the tables to improve overall entity linking performance.
This paper proposes a model called TMR to mine valuable information from simulated data environments. We intend to complete the submission of this paper.
To solve the inherent incompleteness of knowledge graphs (KGs), numbers of knowledge graph completion (KGC) models have been proposed to predict missing links from known triples. Among those, several works have achieved more advanced results via exploiting the structure information on KGs with Graph Convolutional Networks (GCN). However, we observe that entity embeddings aggregated from neighbors in different directions are just simply averaged to complete single-tasks by existing GCN based models, ignoring the specific requirements of forward and backward sub-tasks. In this paper, we propose a Direction-sensitive Multi-task GCN (DsMtGCN) to make full use of the direction information, the multi-head self-attention is applied to specifically combine embeddings in different directions based on various entities and sub-tasks, the geometric constraints are imposed to adjust the distribution of embeddings, and the traditional binary cross-entropy loss is modified to reflect the triple uncertainty. Moreover, the competitive experiments results on several benchmark datasets verify the effectiveness of our model.
Constructing commonsense knowledge graphs (CKGs) has attracted wide research attention due to its significant importance in cognitive intelligence. Nevertheless, existing CKGs are typically oriented to English, limiting the research in non-English languages. Meanwhile, the emergence of foundation models like ChatGPT and GPT-4 has shown promising intelligence with the help of reinforcement learning from human feedback. Under the background, in this paper, we utilize foundation models to construct a Chinese CKG, named Snowman. Specifically, we distill different types of commonsense head items from ChatGPT, and continue to use it to collect tail items with respect to the head items and pre-defined relations. Based on the preliminary analysis, we find the negative commonsense knowledge distilled by ChatGPT achieves lower human acceptance compared to other knowledge. Therefore, we design a simple yet effective self-instruct filtering strategy to filter out invalid negative commonsense. Overall, the constructed Snowman covers more than ten million Chinese commonsense triples, making it the largest Chinese CKG. Moreover, human studies show the acceptance of Snowman achieves 90.6\%, indicating the high-quality triples distilled by the cutting-edge foundation model. We also conduct experiments on commonsense knowledge models to show the usability and effectiveness of our Snowman.
Recently, ChatGPT, a representative large language model (LLM), has gained considerable attention due to its powerful emergent abilities. Some researchers suggest that LLMs could potentially replace structured knowledge bases like knowledge graphs (KGs) and function as parameterized knowledge bases. However, while LLMs are proficient at learning probabilistic language patterns based on large corpus and engaging in conversations with humans, they, like previous smaller pre-trained language models (PLMs), still have difficulty in recalling facts while generating knowledge-grounded contents. To overcome these limitations, researchers have proposed enhancing data-driven PLMs with knowledge-based KGs to incorporate explicit factual knowledge into PLMs, thus improving their performance to generate texts requiring factual knowledge and providing more informed responses to user queries. This paper reviews the studies on enhancing PLMs with KGs, detailing existing knowledge graph enhanced pre-trained language models (KGPLMs) as well as their applications. Inspired by existing studies on KGPLM, this paper proposes to enhance LLMs with KGs by developing knowledge graph-enhanced large language models (KGLLMs). KGLLM provides a solution to enhance LLMs' factual reasoning ability, opening up new avenues for LLM research.
This paper presents a novel study on harnessing Large Language Models' (LLMs) outstanding knowledge and reasoning abilities for explainable financial time series forecasting. The application of machine learning models to financial time series comes with several challenges, including the difficulty in cross-sequence reasoning and inference, the hurdle of incorporating multi-modal signals from historical news, financial knowledge graphs, etc., and the issue of interpreting and explaining the model results. In this paper, we focus on NASDAQ-100 stocks, making use of publicly accessible historical stock price data, company metadata, and historical economic/financial news. We conduct experiments to illustrate the potential of LLMs in offering a unified solution to the aforementioned challenges. Our experiments include trying zero-shot/few-shot inference with GPT-4 and instruction-based fine-tuning with a public LLM model Open LLaMA. We demonstrate our approach outperforms a few baselines, including the widely applied classic ARMA-GARCH model and a gradient-boosting tree model. Through the performance comparison results and a few examples, we find LLMs can make a well-thought decision by reasoning over information from both textual news and price time series and extracting insights, leveraging cross-sequence information, and utilizing the inherent knowledge embedded within the LLM. Additionally, we show that a publicly available LLM such as Open-LLaMA, after fine-tuning, can comprehend the instruction to generate explainable forecasts and achieve reasonable performance, albeit relatively inferior in comparison to GPT-4.
The recommendation algorithm based on knowledge graphs is at a relatively mature stage. However, there are still some problems in the recommendation of specific areas. For example, in the tourism field, selecting suitable tourist attraction attributes process is complicated as the recommendation basis for tourist attractions. In this paper, we propose the improved Attention Knowledge Graph Convolution Network model, named ($Att-KGCN$), which automatically discovers the neighboring entities of the target scenic spot semantically. The attention layer aggregates relatively similar locations and represents them with an adjacent vector. Then, according to the tourist's preferred choices, the model predicts the probability of similar spots as a recommendation system. A knowledge graph dataset of tourist attractions used based on tourism data on Socotra Island-Yemen. Through experiments, it is verified that the Attention Knowledge Graph Convolution Network has a good effect on the recommendation of tourist attractions and can make more recommendations for tourists' choices.
High-quality data is essential for conversational recommendation systems and serves as the cornerstone of the network architecture development and training strategy design. Existing works contribute heavy human efforts to manually labeling or designing and extending recommender dialogue templates. However, they suffer from (i) the limited number of human annotators results in that datasets can hardly capture rich and large-scale cases in the real world, (ii) the limited experience and knowledge of annotators account for the uninformative corpus and inappropriate recommendations. In this paper, we propose a novel automatic dataset synthesis approach that can generate both large-scale and high-quality recommendation dialogues through a data2text generation process, where unstructured recommendation conversations are generated from structured graphs based on user-item information from the real world. In doing so, we comprehensively exploit: (i) rich personalized user profiles from traditional recommendation datasets, (ii) rich external knowledge from knowledge graphs, and (iii) the conversation ability contained in human-to-human conversational recommendation datasets. Extensive experiments validate the benefit brought by the automatically synthesized data under low-resource scenarios and demonstrate the promising potential to facilitate the development of a more effective conversational recommendation system.
Zero-Shot Learning (ZSL), which aims at automatically recognizing unseen objects, is a promising learning paradigm to understand new real-world knowledge for machines continuously. Recently, the Knowledge Graph (KG) has been proven as an effective scheme for handling the zero-shot task with large-scale and non-attribute data. Prior studies always embed relationships of seen and unseen objects into visual information from existing knowledge graphs to promote the cognitive ability of the unseen data. Actually, real-world knowledge is naturally formed by multimodal facts. Compared with ordinary structural knowledge from a graph perspective, multimodal KG can provide cognitive systems with fine-grained knowledge. For example, the text description and visual content can depict more critical details of a fact than only depending on knowledge triplets. Unfortunately, this multimodal fine-grained knowledge is largely unexploited due to the bottleneck of feature alignment between different modalities. To that end, we propose a multimodal intensive ZSL framework that matches regions of images with corresponding semantic embeddings via a designed dense attention module and self-calibration loss. It makes the semantic transfer process of our ZSL framework learns more differentiated knowledge between entities. Our model also gets rid of the performance limitation of only using rough global features. We conduct extensive experiments and evaluate our model on large-scale real-world data. The experimental results clearly demonstrate the effectiveness of the proposed model in standard zero-shot classification tasks.
Large language models (LLMs), such as ChatGPT and GPT4, are making new waves in the field of natural language processing and artificial intelligence, due to their emergent ability and generalizability. However, LLMs are black-box models, which often fall short of capturing and accessing factual knowledge. In contrast, Knowledge Graphs (KGs), Wikipedia and Huapu for example, are structured knowledge models that explicitly store rich factual knowledge. KGs can enhance LLMs by providing external knowledge for inference and interpretability. Meanwhile, KGs are difficult to construct and evolving by nature, which challenges the existing methods in KGs to generate new facts and represent unseen knowledge. Therefore, it is complementary to unify LLMs and KGs together and simultaneously leverage their advantages. In this article, we present a forward-looking roadmap for the unification of LLMs and KGs. Our roadmap consists of three general frameworks, namely, 1) KG-enhanced LLMs, which incorporate KGs during the pre-training and inference phases of LLMs, or for the purpose of enhancing understanding of the knowledge learned by LLMs; 2) LLM-augmented KGs, that leverage LLMs for different KG tasks such as embedding, completion, construction, graph-to-text generation, and question answering; and 3) Synergized LLMs + KGs, in which LLMs and KGs play equal roles and work in a mutually beneficial way to enhance both LLMs and KGs for bidirectional reasoning driven by both data and knowledge. We review and summarize existing efforts within these three frameworks in our roadmap and pinpoint their future research directions.
Knowledge graph completion (KGC) aims to solve the incompleteness of knowledge graphs (KGs) by predicting missing links from known triples, numbers of knowledge graph embedding (KGE) models have been proposed to perform KGC by learning embeddings. Nevertheless, most existing embedding models map each relation into a unique vector, overlooking the specific fine-grained semantics of them under different entities. Additionally, the few available fine-grained semantic models rely on clustering algorithms, resulting in limited performance and applicability due to the cumbersome two-stage training process. In this paper, we present a novel method utilizing contextual dictionary lookup, enabling conventional embedding models to learn fine-grained semantics of relations in an end-to-end manner. More specifically, we represent each relation using a dictionary that contains multiple latent semantics. The composition of a given entity and the dictionary's central semantics serves as the context for generating a lookup, thus determining the fine-grained semantics of the relation adaptively. The proposed loss function optimizes both the central and fine-grained semantics simultaneously to ensure their semantic consistency. Besides, we introduce two metrics to assess the validity and accuracy of the dictionary lookup operation. We extend several KGE models with the method, resulting in substantial performance improvements on widely-used benchmark datasets.
This paper studies speculative reasoning task on real-world knowledge graphs (KG) that contain both \textit{false negative issue} (i.e., potential true facts being excluded) and \textit{false positive issue} (i.e., unreliable or outdated facts being included). State-of-the-art methods fall short in the speculative reasoning ability, as they assume the correctness of a fact is solely determined by its presence in KG, making them vulnerable to false negative/positive issues. The new reasoning task is formulated as a noisy Positive-Unlabeled learning problem. We propose a variational framework, namely nPUGraph, that jointly estimates the correctness of both collected and uncollected facts (which we call \textit{label posterior}) and updates model parameters during training. The label posterior estimation facilitates speculative reasoning from two perspectives. First, it improves the robustness of a label posterior-aware graph encoder against false positive links. Second, it identifies missing facts to provide high-quality grounds of reasoning. They are unified in a simple yet effective self-training procedure. Empirically, extensive experiments on three benchmark KG and one Twitter dataset with various degrees of false negative/positive cases demonstrate the effectiveness of nPUGraph.
This work explores unifying knowledge enhanced recommendation with multi-domain recommendation systems in a conversational AI assistant application. Multi-domain recommendation leverages users' interactions in previous domains to improve recommendations in a new one. Knowledge graph enhancement seeks to use external knowledge graphs to improve recommendations within a single domain. Both research threads incorporate related information to improve the recommendation task. We propose to unify these approaches: using information from interactions in other domains as well as external knowledge graphs to make predictions in a new domain that would not be possible with either information source alone. We develop a new model and demonstrate the additive benefit of these approaches on a dataset derived from millions of users' queries for content across three domains (videos, music, and books) in a live virtual assistant application. We demonstrate significant improvement on overall recommendations as well as on recommendations for new users of a domain.
Conversational recommender systems (CRS) enhance the expressivity and personalization of recommendations through multiple turns of user-system interaction. Critiquing is a well-known paradigm for CRS that allows users to iteratively refine recommendations by providing feedback about attributes of recommended items. While existing critiquing methodologies utilize direct attributes of items to address user requests such as 'I prefer Western movies', the opportunity of incorporating richer contextual and side information about items stored in Knowledge Graphs (KG) into the critiquing paradigm has been overlooked. Employing this substantial knowledge together with a well-established reasoning methodology paves the way for critique-based recommenders to allow for complex knowledge-based feedback (e.g., 'I like movies featuring war side effects on veterans') which may arise in natural user-system conversations. In this work, we aim to increase the flexibility of critique-based recommendation by integrating KGs and propose a novel Bayesian inference framework that enables reasoning with relational knowledge-based feedback. We study and formulate the framework considering a Gaussian likelihood and evaluate it on two well-known recommendation datasets with KGs. Our evaluations demonstrate the effectiveness of our framework in leveraging indirect KG-based feedback (i.e., preferred relational properties of items rather than preferred items themselves), often improving personalized recommendations over a one-shot recommender by more than 15%. This work enables a new paradigm for using rich knowledge content and reasoning over indirect evidence as a mechanism for critiquing interactions with CRS.
This comprehensive review aims to provide an overview of the current state of Healthcare Knowledge Graphs (HKGs), including their construction, utilization models, and applications across various healthcare and biomedical research domains. We thoroughly analyzed existing literature on HKGs, covering their construction methodologies, utilization techniques, and applications in basic science research, pharmaceutical research and development, clinical decision support, and public health. The review encompasses both model-free and model-based utilization approaches and the integration of HKGs with large language models (LLMs). We searched Google Scholar for relevant papers on HKGs and classified them into the following topics: HKG construction, HKG utilization, and their downstream applications in various domains. We also discussed their special challenges and the promise for future work. The review highlights the potential of HKGs to significantly impact biomedical research and clinical practice by integrating vast amounts of biomedical knowledge from multiple domains. The synergy between HKGs and LLMs offers promising opportunities for constructing more comprehensive knowledge graphs and improving the accuracy of healthcare applications. HKGs have emerged as a powerful tool for structuring medical knowledge, with broad applications across biomedical research, clinical decision-making, and public health. This survey serves as a roadmap for future research and development in the field of HKGs, highlighting the potential of combining knowledge graphs with advanced machine learning models for healthcare transformation.
The number of published research papers has experienced exponential growth in recent years, which makes it crucial to develop new methods for efficient and versatile information extraction and knowledge discovery. To address this need, we propose a Semantic Knowledge Graph (SKG) that integrates semantic concepts from abstracts and other meta-information to represent the corpus. The SKG can support various semantic queries in academic literature thanks to the high diversity and rich information content stored within. To extract knowledge from unstructured text, we develop a Knowledge Extraction Module that includes a semi-supervised pipeline for entity extraction and entity normalization. We also create an ontology to integrate the concepts with other meta information, enabling us to build the SKG. Furthermore, we design and develop a dataflow system that demonstrates how to conduct various semantic queries flexibly and interactively over the SKG. To demonstrate the effectiveness of our approach, we conduct the research based on the visualization literature and provide real-world use cases to show the usefulness of the SKG. The dataset and codes for this work are available at https://osf.io/aqv8p/?view_only=2c26b36e3e3941ce999df47e4616207f.