In this study, 0.5m high resolution satellite datasets over Indian urban region was used to demonstrate the applicability of deep learning models over Ahmedabad, India. Here, YOLOv7 instance segmentation model was trained on well curated trees canopy dataset (6500 images) in order to carry out the change detection. During training, evaluation metrics such as bounding box regression and mask regression loss, mean average precision (mAP) and stochastic gradient descent algorithm were used for evaluating and optimizing the performance of model. After the 500 epochs, the mAP of 0.715 and 0.699 for individual tree detection and tree canopy mask segmentation were obtained. However, by further tuning hyper parameters of the model, maximum accuracy of 80 % of trees detection with false segmentation rate of 2% on data was obtained.
The data-intensive nature of supervised classification drives the interest of the researchers towards unsupervised approaches, especially for problems such as medical image segmentation, where labeled data is scarce. Building on the recent advancements of Vision transformers (ViT) in computer vision, we propose an unsupervised segmentation framework using a pre-trained Dino-ViT. In the proposed method, we leverage the inherent graph structure within the image to realize a significant performance gain for segmentation in medical images. For this, we introduce a modularity-based loss function coupled with a Graph Attention Network (GAT) to effectively capture the inherent graph topology within the image. Our method achieves state-of-the-art performance, even significantly surpassing or matching that of existing (semi)supervised technique such as MedSAM which is a Segment Anything Model in medical images. We demonstrate this using two challenging medical image datasets ISIC-2018 and CVC-ColonDB. This work underscores the potential of unsupervised approaches in advancing medical image analysis in scenarios where labeled data is scarce. The github repository of the code is available on [https://github.com/mudit-adityaja/UnSegMedGAT].
3D LiDAR point cloud data is crucial for scene perception in computer vision, robotics, and autonomous driving. Geometric and semantic scene understanding, involving 3D point clouds, is essential for advancing autonomous driving technologies. However, significant challenges remain, particularly in improving the overall accuracy (e.g., segmentation accuracy, depth estimation accuracy, etc.) and efficiency of these systems. To address the challenge in terms of accuracy related to LiDAR-based tasks, we present DurLAR, the first high-fidelity 128-channel 3D LiDAR dataset featuring panoramic ambient (near infrared) and reflectivity imagery. To improve efficiency in 3D segmentation while ensuring the accuracy, we propose a novel pipeline that employs a smaller architecture, requiring fewer ground-truth annotations while achieving superior segmentation accuracy compared to contemporary approaches. To improve the segmentation accuracy, we introduce Range-Aware Pointwise Distance Distribution (RAPiD) features and the associated RAPiD-Seg architecture. All contributions have been accepted by peer-reviewed conferences, underscoring the advancements in both accuracy and efficiency in 3D LiDAR applications for autonomous driving. Full abstract: https://etheses.dur.ac.uk/15738/.
Deep learning models in medical contexts face challenges like data scarcity, inhomogeneity, and privacy concerns. This study focuses on improving ventricular segmentation in brain MRI images using synthetic data. We employed two latent diffusion models (LDMs): a mask generator trained using 10,000 masks, and a corresponding SPADE image generator optimized using 6,881 scans to create an MRI conditioned on a 3D brain mask. Conditioning the mask generator on ventricular volume in combination with classifier-free guidance enabled the control of the ventricular volume distribution of the generated synthetic images. Next, the performance of the synthetic data was tested using three nnU-Net segmentation models trained on a real, augmented and entirely synthetic data, respectively. The resulting models were tested on a completely independent hold-out dataset of patients with enlarged ventricles, with manual delineation of the ventricles used as ground truth. The model trained on real data showed a mean absolute error (MAE) of 9.09 \pm 12.18 mL in predicted ventricular volume, while the models trained on synthetic and augmented data showed MAEs of 7.52 \pm 4.81 mL and 6.23 \pm 4.33 mL, respectively. Both the synthetic and augmented model also outperformed the state-of-the-art model SynthSeg, which due to limited performance in cases of large ventricular volumes, showed an MAE of 7.73 \pm 12.12 mL with a factor of 3 higher standard deviation. The model trained on augmented data showed the highest Dice score of 0.892 \pm 0.05, slightly outperforming SynthSeg and on par with the model trained on real data. The synthetic model performed similar to SynthSeg. In summary, we provide evidence that guided synthesis of labeled brain MRI data using LDMs improves the segmentation of enlarged ventricles and outperforms existing state-of-the-art segmentation models.
Accurate segmentation of brain tumors plays a key role in the diagnosis and treatment of brain tumor diseases. It serves as a critical technology for quantifying tumors and extracting their features. With the increasing application of deep learning methods, the computational burden has become progressively heavier. To achieve a lightweight model with good segmentation performance, this study proposes the MBDRes-U-Net model using the three-dimensional (3D) U-Net codec framework, which integrates multibranch residual blocks and fused attention into the model. The computational burden of the model is reduced by the branch strategy, which effectively uses the rich local features in multimodal images and enhances the segmentation performance of subtumor regions. Additionally, during encoding, an adaptive weighted expansion convolution layer is introduced into the multi-branch residual block, which enriches the feature expression and improves the segmentation accuracy of the model. Experiments on the Brain Tumor Segmentation (BraTS) Challenge 2018 and 2019 datasets show that the architecture could maintain a high precision of brain tumor segmentation while considerably reducing the calculation overhead.Our code is released at https://github.com/Huaibei-normal-university-cv-laboratory/mbdresunet
Current semantic segmentation models typically require a substantial amount of manually annotated data, a process that is both time-consuming and resource-intensive. Alternatively, leveraging advanced text-to-image models such as Midjourney and Stable Diffusion has emerged as an efficient strategy, enabling the automatic generation of synthetic data in place of manual annotations. However, previous methods have been limited to generating single-instance images, as the generation of multiple instances with Stable Diffusion has proven unstable. To address this limitation and expand the scope and diversity of synthetic datasets, we propose a framework \textbf{Free-Mask} that combines a Diffusion Model for segmentation with advanced image editing capabilities, allowing for the integration of multiple objects into images via text-to-image models. Our method facilitates the creation of highly realistic datasets that closely emulate open-world environments while generating accurate segmentation masks. It reduces the labor associated with manual annotation and also ensures precise mask generation. Experimental results demonstrate that synthetic data generated by \textbf{Free-Mask} enables segmentation models to outperform those trained on real data, especially in zero-shot settings. Notably, \textbf{Free-Mask} achieves new state-of-the-art results on previously unseen classes in the VOC 2012 benchmark.
High-speed video (HSV) segmentation is essential for analyzing dynamic physical processes in scientific and industrial applications, such as boiling heat transfer. Existing models like U-Net struggle with generalization and accurately segmenting complex bubble formations. We present VideoSAM, a specialized adaptation of the Segment Anything Model (SAM), fine-tuned on a diverse HSV dataset for phase detection. Through diverse experiments, VideoSAM demonstrates superior performance across four fluid environments -- Water, FC-72, Nitrogen, and Argon -- significantly outperforming U-Net in complex segmentation tasks. In addition to introducing VideoSAM, we contribute an open-source HSV segmentation dataset designed for phase detection, enabling future research in this domain. Our findings underscore VideoSAM's potential to set new standards in robust and accurate HSV segmentation. The code and dataset used in this study are available online at https://github.com/chikap421/videosam .
Automated waste recycling aims to efficiently separate the recyclable objects from the waste by employing vision-based systems. However, the presence of varying shaped objects having different material types makes it a challenging problem, especially in cluttered environments. Existing segmentation methods perform reasonably on many semantic segmentation datasets by employing multi-contextual representations, however, their performance is degraded when utilized for waste object segmentation in cluttered scenarios. In addition, plastic objects further increase the complexity of the problem due to their translucent nature. To address these limitations, we introduce an efficacious segmentation network, named COSNet, that uses boundary cues along with multi-contextual information to accurately segment the objects in cluttered scenes. COSNet introduces novel components including feature sharpening block (FSB) and boundary enhancement module (BEM) for enhancing the features and highlighting the boundary information of irregular waste objects in cluttered environment. Extensive experiments on three challenging datasets including ZeroWaste-f, SpectralWaste, and ADE20K demonstrate the effectiveness of the proposed method. Our COSNet achieves a significant gain of 1.8% on ZeroWaste-f and 2.1% on SpectralWaste datasets respectively in terms of mIoU metric.
Recent advancements in medical imaging have resulted in more complex and diverse images, with challenges such as high anatomical variability, blurred tissue boundaries, low organ contrast, and noise. Traditional segmentation methods struggle to address these challenges, making deep learning approaches, particularly U-shaped architectures, increasingly prominent. However, the quadratic complexity of standard self-attention makes Transformers computationally prohibitive for high-resolution images. To address these challenges, we propose MLLA-UNet (Mamba-Like Linear Attention UNet), a novel architecture that achieves linear computational complexity while maintaining high segmentation accuracy through its innovative combination of linear attention and Mamba-inspired adaptive mechanisms, complemented by an efficient symmetric sampling structure for enhanced feature processing. Our architecture effectively preserves essential spatial features while capturing long-range dependencies at reduced computational complexity. Additionally, we introduce a novel sampling strategy for multi-scale feature fusion. Experiments demonstrate that MLLA-UNet achieves state-of-the-art performance on six challenging datasets with 24 different segmentation tasks, including but not limited to FLARE22, AMOS CT, and ACDC, with an average DSC of 88.32%. These results underscore the superiority of MLLA-UNet over existing methods. Our contributions include the novel 2D segmentation architecture and its empirical validation. The code is available via https://github.com/csyfjiang/MLLA-UNet.
Surgical scene segmentation is essential for enhancing surgical precision, yet it is frequently compromised by the scarcity and imbalance of available data. To address these challenges, semantic image synthesis methods based on generative adversarial networks and diffusion models have been developed. However, these models often yield non-diverse images and fail to capture small, critical tissue classes, limiting their effectiveness. In response, we propose the Class-Aware Semantic Diffusion Model (CASDM), a novel approach which utilizes segmentation maps as conditions for image synthesis to tackle data scarcity and imbalance. Novel class-aware mean squared error and class-aware self-perceptual loss functions have been defined to prioritize critical, less visible classes, thereby enhancing image quality and relevance. Furthermore, to our knowledge, we are the first to generate multi-class segmentation maps using text prompts in a novel fashion to specify their contents. These maps are then used by CASDM to generate surgical scene images, enhancing datasets for training and validating segmentation models. Our evaluation, which assesses both image quality and downstream segmentation performance, demonstrates the strong effectiveness and generalisability of CASDM in producing realistic image-map pairs, significantly advancing surgical scene segmentation across diverse and challenging datasets.
Segmentation of medical images is a fundamental task with numerous applications. While MRI, CT, and PET modalities have significantly benefited from deep learning segmentation techniques, more recent modalities, like functional ultrasound (fUS), have seen limited progress. fUS is a non invasive imaging method that measures changes in cerebral blood volume (CBV) with high spatio-temporal resolution. However, distinguishing arterioles from venules in fUS is challenging due to opposing blood flow directions within the same pixel. Ultrasound localization microscopy (ULM) can enhance resolution by tracking microbubble contrast agents but is invasive, and lacks dynamic CBV quantification. In this paper, we introduce the first deep learning-based segmentation tool for fUS images, capable of differentiating signals from different vascular compartments, based on ULM automatic annotation and enabling dynamic CBV quantification. We evaluate various UNet architectures on fUS images of rat brains, achieving competitive segmentation performance, with 90% accuracy, a 71% F1 score, and an IoU of 0.59, using only 100 temporal frames from a fUS stack. These results are comparable to those from tubular structure segmentation in other imaging modalities. Additionally, models trained on resting-state data generalize well to images captured during visual stimulation, highlighting robustness. This work offers a non-invasive, cost-effective alternative to ULM, enhancing fUS data interpretation and improving understanding of vessel function. Our pipeline shows high linear correlation coefficients between signals from predicted and actual compartments in both cortical and deeperregions, showcasing its ability to accurately capture blood flow dynamics.
Testis size is known to be one of the main predictors of male fertility, usually assessed in clinical workup via palpation or imaging. Despite its potential, population-level evaluation of testicular volume using imaging remains underexplored. Previous studies, limited by small and biased datasets, have demonstrated the feasibility of machine learning for testis volume segmentation. This paper presents an evaluation of segmentation methods for testicular volume using Magnet Resonance Imaging data from the UKBiobank. The best model achieves a median dice score of $0.87$, compared to median dice score of $0.83$ for human interrater reliability on the same dataset, enabling large-scale annotation on a population scale for the first time. Our overall aim is to provide a trained model, comparative baseline methods, and annotated training data to enhance accessibility and reproducibility in testis MRI segmentation research.
The field of Remote Sensing Domain Generalization (RSDG) has emerged as a critical and valuable research frontier, focusing on developing models that generalize effectively across diverse scenarios. Despite the substantial domain gaps in RS images that are characterized by variabilities such as location, wavelength, and sensor type, research in this area remains underexplored: (1) Current cross-domain methods primarily focus on Domain Adaptation (DA), which adapts models to predefined domains rather than to unseen ones; (2) Few studies targeting the RSDG issue, especially for semantic segmentation tasks, where existing models are developed for specific unknown domains, struggling with issues of underfitting on other unknown scenarios; (3) Existing RS foundation models tend to prioritize in-domain performance over cross-domain generalization. To this end, we introduce the first vision foundation model for RSDG semantic segmentation, CrossEarth. CrossEarth demonstrates strong cross-domain generalization through a specially designed data-level Earth-Style Injection pipeline and a model-level Multi-Task Training pipeline. In addition, for the semantic segmentation task, we have curated an RSDG benchmark comprising 28 cross-domain settings across various regions, spectral bands, platforms, and climates, providing a comprehensive framework for testing the generalizability of future RSDG models. Extensive experiments on this benchmark demonstrate the superiority of CrossEarth over existing state-of-the-art methods.
Federated learning (FL) enables collaborative model training across institutions without sharing sensitive data, making it an attractive solution for medical imaging tasks. However, traditional FL methods, such as Federated Averaging (FedAvg), face difficulties in generalizing across domains due to variations in imaging protocols and patient demographics across institutions. This challenge is particularly evident in pancreas MRI segmentation, where anatomical variability and imaging artifacts significantly impact performance. In this paper, we conduct a comprehensive evaluation of FL algorithms for pancreas MRI segmentation and introduce a novel approach that incorporates adaptive aggregation weights. By dynamically adjusting the contribution of each client during model aggregation, our method accounts for domain-specific differences and improves generalization across heterogeneous datasets. Experimental results demonstrate that our approach enhances segmentation accuracy and reduces the impact of domain shift compared to conventional FL methods while maintaining privacy-preserving capabilities. Significant performance improvements are observed across multiple hospitals (centers).
Current cardiac cine magnetic resonance image (cMR) studies focus on the end diastole (ED) and end systole (ES) phases, while ignoring the abundant temporal information in the whole image sequence. This is because whole sequence segmentation is currently a tedious process and inaccurate. Conventional whole sequence segmentation approaches first estimate the motion field between frames, which is then used to propagate the mask along the temporal axis. However, the mask propagation results could be prone to error, especially for the basal and apex slices, where through-plane motion leads to significant morphology and structural change during the cardiac cycle. Inspired by recent advances in video object segmentation (VOS), based on spatio-temporal memory (STM) networks, we propose a continuous STM (CSTM) network for semi-supervised whole heart and whole sequence cMR segmentation. Our CSTM network takes full advantage of the spatial, scale, temporal and through-plane continuity prior of the underlying heart anatomy structures, to achieve accurate and fast 4D segmentation. Results of extensive experiments across multiple cMR datasets show that our method can improve the 4D cMR segmentation performance, especially for the hard-to-segment regions.
Cardiac image segmentation is essential for automated cardiac function assessment and monitoring of changes in cardiac structures over time. Inspired by coarse-to-fine approaches in image analysis, we propose a novel multitask compositional segmentation approach that can simultaneously localize the heart in a cardiac image and perform part-based segmentation of different regions of interest. We demonstrate that this compositional approach achieves better results than direct segmentation of the anatomies. Further, we propose a novel Cross-Modal Feature Integration (CMFI) module to leverage the metadata related to cardiac imaging collected during image acquisition. We perform experiments on two different modalities, MRI and ultrasound, using public datasets, Multi-disease, Multi-View, and Multi-Centre (M&Ms-2) and Multi-structure Ultrasound Segmentation (CAMUS) data, to showcase the efficiency of the proposed compositional segmentation method and Cross-Modal Feature Integration module incorporating metadata within the proposed compositional segmentation network. The source code is available: https://github.com/kabbas570/CompSeg-MetaData.
Medical image segmentation is pivotal in healthcare, enhancing diagnostic accuracy, informing treatment strategies, and tracking disease progression. This process allows clinicians to extract critical information from visual data, enabling personalized patient care. However, developing neural networks for segmentation remains challenging, especially when preserving image resolution, which is essential in detecting subtle details that influence diagnoses. Moreover, the lack of transparency in these deep learning models has slowed their adoption in clinical practice. Efforts in model interpretability are increasingly focused on making these models' decision-making processes more transparent. In this paper, we introduce MAPUNetR, a novel architecture that synergizes the strengths of transformer models with the proven U-Net framework for medical image segmentation. Our model addresses the resolution preservation challenge and incorporates attention maps highlighting segmented regions, increasing accuracy and interpretability. Evaluated on the BraTS 2020 dataset, MAPUNetR achieved a dice score of 0.88 and a dice coefficient of 0.92 on the ISIC 2018 dataset. Our experiments show that the model maintains stable performance and potential as a powerful tool for medical image segmentation in clinical practice.
Accurate segmentation of brain metastases (BMs) in MR image is crucial for the diagnosis and follow-up of patients. Methods based on deep convolutional neural networks (CNNs) have achieved high segmentation performance. However, due to the loss of critical feature information caused by convolutional and pooling operations, CNNs still face great challenges in small BMs segmentation. Besides, BMs are irregular and easily confused with healthy tissues, which makes it difficult for the model to effectively learn tumor structure during training. To address these issues, this paper proposes a novel model called feature-guided attention network with curriculum learning (FANCL). Based on CNNs, FANCL utilizes the input image and its feature to establish the intrinsic connections between metastases of different sizes, which can effectively compensate for the loss of high-level feature from small tumors with the information of large tumors. Furthermore, FANCL applies the voxel-level curriculum learning strategy to help the model gradually learn the structure and details of BMs. And baseline models of varying depths are employed as curriculum-mining networks for organizing the curriculum progression. The evaluation results on the BraTS-METS 2023 dataset indicate that FANCL significantly improves the segmentation performance, confirming the effectiveness of our method.
Cross-domain few-shot segmentation (CD-FSS) is proposed to first pre-train the model on a large-scale source-domain dataset, and then transfer the model to data-scarce target-domain datasets for pixel-level segmentation. The significant domain gap between the source and target datasets leads to a sharp decline in the performance of existing few-shot segmentation (FSS) methods in cross-domain scenarios. In this work, we discover an intriguing phenomenon: simply filtering different frequency components for target domains can lead to a significant performance improvement, sometimes even as high as 14% mIoU. Then, we delve into this phenomenon for an interpretation, and find such improvements stem from the reduced inter-channel correlation in feature maps, which benefits CD-FSS with enhanced robustness against domain gaps and larger activated regions for segmentation. Based on this, we propose a lightweight frequency masker, which further reduces channel correlations by an Amplitude-Phase Masker (APM) module and an Adaptive Channel Phase Attention (ACPA) module. Notably, APM introduces only 0.01% additional parameters but improves the average performance by over 10%, and ACPA imports only 2.5% parameters but further improves the performance by over 1.5%, which significantly surpasses the state-of-the-art CD-FSS methods.
This study conducted a comprehensive performance evaluation on YOLO11 (or YOLOv11) and YOLOv8, the latest in the "You Only Look Once" (YOLO) series, focusing on their instance segmentation capabilities for immature green apples in orchard environments. YOLO11n-seg achieved the highest mask precision across all categories with a notable score of 0.831, highlighting its effectiveness in fruit detection. YOLO11m-seg and YOLO11l-seg excelled in non-occluded and occluded fruitlet segmentation with scores of 0.851 and 0.829, respectively. Additionally, YOLOv11x-seg led in mask recall for all categories, achieving a score of 0.815, with YOLO11m-seg performing best for non-occluded immature green fruitlets at 0.858 and YOLOv8x-seg leading the occluded category with 0.800. In terms of mean average precision at a 50\% intersection over union (mAP@50), YOLOv11m-seg consistently outperformed, registering the highest scores for both box and mask segmentation, at 0.876 and 0.860 for the "All" class and 0.908 and 0.909 for non-occluded immature fruitlets, respectively. YOLO11l-seg and YOLOv8l-seg shared the top box mAP@50 for occluded immature fruitlets at 0.847, while YOLO11m-seg achieved the highest mask mAP@50 of 0.810. Despite the advancements in YOLO11, YOLOv8n surpassed its counterparts in image processing speed, with an impressive inference speed of 3.3 milliseconds, compared to the fastest YOLO11 series model at 4.8 milliseconds, underscoring its suitability for real-time agricultural applications related to complex green fruit environments. (YOLOv11 segmentation)