The Scholarly Question Answering over Linked Data (Scholarly QALD) at The International Semantic Web Conference (ISWC) 2023 challenge presents two sub-tasks to tackle question answering (QA) over knowledge graphs (KGs). We answer the KGQA over DBLP (DBLP-QUAD) task by proposing a neuro-symbolic (NS) framework based on PSYCHIC, an extractive QA model capable of identifying the query and entities related to a KG question. Our system achieved a F1 score of 00.18% on question answering and came in third place for entity linking (EL) with a score of 71.00%.
Commonsense Knowledge Graphs (CSKGs) are crucial for commonsense reasoning, yet constructing them through human annotations can be costly. As a result, various automatic methods have been proposed to construct CSKG with larger semantic coverage. However, these unsupervised approaches introduce spurious noise that can lower the quality of the resulting CSKG, which cannot be tackled easily by existing denoising algorithms due to the unique characteristics of nodes and structures in CSKGs. To address this issue, we propose Gold (Global and Local-aware Denoising), a denoising framework for CSKGs that incorporates entity semantic information, global rules, and local structural information from the CSKG. Experiment results demonstrate that Gold outperforms all baseline methods in noise detection tasks on synthetic noisy CSKG benchmarks. Furthermore, we show that denoising a real-world CSKG is effective and even benefits the downstream zero-shot commonsense question-answering task.
Previous studies have relied on existing question-answering benchmarks to evaluate the knowledge stored in large language models (LLMs). However, this approach has limitations regarding factual knowledge coverage, as it mostly focuses on generic domains which may overlap with the pretraining data. This paper proposes a framework to systematically assess the factual knowledge of LLMs by leveraging knowledge graphs (KGs). Our framework automatically generates a set of questions and expected answers from the facts stored in a given KG, and then evaluates the accuracy of LLMs in answering these questions. We systematically evaluate the state-of-the-art LLMs with KGs in generic and specific domains. The experiment shows that ChatGPT is consistently the top performer across all domains. We also find that LLMs performance depends on the instruction finetuning, domain and question complexity and is prone to adversarial context.
CityGML is a widely adopted standard by the Open Geospatial Consortium (OGC) for representing and exchanging 3D city models. The representation of semantic and topological properties in CityGML makes it possible to query such 3D city data to perform analysis in various applications, e.g., security management and emergency response, energy consumption and estimation, and occupancy measurement. However, the potential of querying CityGML data has not been fully exploited. The official GML/XML encoding of CityGML is only intended as an exchange format but is not suitable for query answering. The most common way of dealing with CityGML data is to store them in the 3DCityDB system as relational tables and then query them with the standard SQL query language. Nevertheless, for end users, it remains a challenging task to formulate queries over 3DCityDB directly for their ad-hoc analytical tasks, because there is a gap between the conceptual semantics of CityGML and the relational schema adopted in 3DCityDB. In fact, the semantics of CityGML itself can be modeled as a suitable ontology. The technology of Knowledge Graphs (KGs), where an ontology is at the core, is a good solution to bridge such a gap. Moreover, embracing KGs makes it easier to integrate with other spatial data sources, e.g., OpenStreetMap and existing (Geo)KGs (e.g., Wikidata, DBPedia, and GeoNames), and to perform queries combining information from multiple data sources. In this work, we describe a CityGML KG framework to populate the concepts in the CityGML ontology using declarative mappings to 3DCityDB, thus exposing the CityGML data therein as a KG. To demonstrate the feasibility of our approach, we use CityGML data from the city of Munich as test data and integrate OpenStreeMap data in the same area.
Knowledge graph entity typing (KGET) aims at inferring plausible types of entities in knowledge graphs. Existing approaches to KGET focus on how to better encode the knowledge provided by the neighbors and types of an entity into its representation. However, they ignore the semantic knowledge provided by the way in which types can be clustered together. In this paper, we propose a novel method called Multi-view Contrastive Learning for knowledge graph Entity Typing (MCLET), which effectively encodes the coarse-grained knowledge provided by clusters into entity and type embeddings. MCLET is composed of three modules: i) Multi-view Generation and Encoder module, which encodes structured information from entity-type, entity-cluster and cluster-type views; ii) Cross-view Contrastive Learning module, which encourages different views to collaboratively improve view-specific representations of entities and types; iii) Entity Typing Prediction module, which integrates multi-head attention and a Mixture-of-Experts strategy to infer missing entity types. Extensive experiments show the strong performance of MCLET compared to the state-of-the-art
Semi-inductive link prediction (LP) in knowledge graphs (KG) is the task of predicting facts for new, previously unseen entities based on context information. Although new entities can be integrated by retraining the model from scratch in principle, such an approach is infeasible for large-scale KGs, where retraining is expensive and new entities may arise frequently. In this paper, we propose and describe a large-scale benchmark to evaluate semi-inductive LP models. The benchmark is based on and extends Wikidata5M: It provides transductive, k-shot, and 0-shot LP tasks, each varying the available information from (i) only KG structure, to (ii) including textual mentions, and (iii) detailed descriptions of the entities. We report on a small study of recent approaches and found that semi-inductive LP performance is far from transductive performance on long-tail entities throughout all experiments. The benchmark provides a test bed for further research into integrating context and textual information in semi-inductive LP models.
While large language models (LLMs) have made considerable advancements in understanding and generating unstructured text, their application in structured data remains underexplored. Particularly, using LLMs for complex reasoning tasks on knowledge graphs (KGs) remains largely untouched. To address this, we propose KG-GPT, a multi-purpose framework leveraging LLMs for tasks employing KGs. KG-GPT comprises three steps: Sentence Segmentation, Graph Retrieval, and Inference, each aimed at partitioning sentences, retrieving relevant graph components, and deriving logical conclusions, respectively. We evaluate KG-GPT using KG-based fact verification and KGQA benchmarks, with the model showing competitive and robust performance, even outperforming several fully-supervised models. Our work, therefore, marks a significant step in unifying structured and unstructured data processing within the realm of LLMs.
Complex Query Answering (CQA) is a challenge task of Knowledge Graph (KG). Due to the incompleteness of KGs, query embedding (QE) methods have been proposed to encode queries and entities into the same embedding space, and treat logical operators as neural set operators to obtain answers. However, these methods train KG embeddings and neural set operators concurrently on both simple (one-hop) and complex (multi-hop and logical) queries, which causes performance degradation on simple queries and low training efficiency. In this paper, we propose Query to Triple (Q2T), a novel approach that decouples the training for simple and complex queries. Q2T divides the training into two stages: (1) Pre-training a neural link predictor on simple queries to predict tail entities based on the head entity and relation. (2) Training a query encoder on complex queries to encode diverse complex queries into a unified triple form that can be efficiently solved by the pretrained neural link predictor. Our proposed Q2T is not only efficient to train, but also modular, thus easily adaptable to various neural link predictors that have been studied well. Extensive experiments demonstrate that, even without explicit modeling for neural set operators, Q2T still achieves state-of-the-art performance on diverse complex queries over three public benchmarks.
Knowledge representation (KR) is vital in designing symbolic notations to represent real-world facts and facilitate automated decision-making tasks. Knowledge graphs (KGs) have emerged so far as a popular form of KR, offering a contextual and human-like representation of knowledge. In international economics, KGs have proven valuable in capturing complex interactions between commodities, companies, and countries. By putting the gravity model, which is a common economic framework, into the process of building KGs, important factors that affect trade relationships can be taken into account, making it possible to predict international trade patterns. This paper proposes an approach that leverages Knowledge Graph embeddings for modeling international trade, focusing on link prediction using embeddings. Thus, valuable insights are offered to policymakers, businesses, and economists, enabling them to anticipate the effects of changes in the international trade system. Moreover, the integration of traditional machine learning methods with KG embeddings, such as decision trees and graph neural networks are also explored. The research findings demonstrate the potential for improving prediction accuracy and provide insights into embedding explainability in knowledge representation. The paper also presents a comprehensive analysis of the influence of embedding methods on other intelligent algorithms.
For centuries, researchers have sought out ways to connect disparate areas of knowledge. While early scholars (Galileo, da Vinci, etc.) were experts across fields, specialization has taken hold later. With the advent of Artificial Intelligence, we can now explore relationships across areas (e.g., mechanics-biology) or disparate domains (e.g., failure mechanics-art). To achieve this, we use a fine-tuned Large Language Model (LLM), here for a subset of knowledge in multiscale materials failure. The approach includes the use of a general-purpose LLM to distill question-answer pairs from raw sources followed by LLM fine-tuning. The resulting MechGPT LLM foundation model is used in a series of computational experiments to explore its capacity for knowledge retrieval, various language tasks, hypothesis generation, and connecting knowledge across disparate areas. While the model has some ability to recall knowledge from training, we find that LLMs are particularly useful to extract structural insights through Ontological Knowledge Graphs. These interpretable graph structures provide explanatory insights, frameworks for new research questions, and visual representations of knowledge that also can be used in retrieval-augmented generation. Three versions of MechGPT are discussed, featuring different sizes from 13 billion to 70 billion parameters, and reaching context lengths of more than 10,000 tokens. This provides ample capacity for sophisticated retrieval augmented strategies, as well as agent-based modeling where multiple LLMs interact collaboratively and/or adversarially, the incorporation of new data from the literature or web searches, as well as multimodality.
The embedding of Biomedical Knowledge Graphs (BKGs) generates robust representations, valuable for a variety of artificial intelligence applications, including predicting drug combinations and reasoning disease-drug relationships. Meanwhile, contrastive learning (CL) is widely employed to enhance the distinctiveness of these representations. However, constructing suitable contrastive pairs for CL, especially within Knowledge Graphs (KGs), has been challenging. In this paper, we proposed a novel node-based contrastive learning method for knowledge graph embedding, NC-KGE. NC-KGE enhances knowledge extraction in embeddings and speeds up training convergence by constructing appropriate contrastive node pairs on KGs. This scheme can be easily integrated with other knowledge graph embedding (KGE) methods. For downstream task such as biochemical relationship prediction, we have incorporated a relation-aware attention mechanism into NC-KGE, focusing on the semantic relationships and node interactions. Extensive experiments show that NC-KGE performs competitively with state-of-the-art models on public datasets like FB15k-237 and WN18RR. Particularly in biomedical relationship prediction tasks, NC-KGE outperforms all baselines on datasets such as PharmKG8k-28, DRKG17k-21, and BioKG72k-14, especially in predicting drug combination relationships. We release our code at https://github.com/zhi520/NC-KGE.
Integrating large language models (LLMs) into healthcare holds great potential but faces challenges. Pre-training LLMs from scratch for domains like medicine is resource-heavy and often unfeasible. On the other hand, sole reliance on Supervised Fine-tuning (SFT) can result in overconfident predictions and may not tap into domain-specific insights. In response, we present a multi-stage training method combining Domain-specific Continued Pre-training (DCPT), SFT, and Direct Preference Optimization (DPO). In addition, we publish a 3Gb Chinese Medicine (ChiMed) dataset, encompassing medical question answering, plain texts, knowledge graphs, and dialogues, segmented into three training stages. The medical LLM trained with our pipeline, Qilin-Med, shows substantial performance improvement. In the CPT and SFT phases, Qilin-Med achieved 38.4% and 40.0% accuracy on the CMExam test set, respectively. It outperformed the basemodel Baichuan-7B (accuracy: 33.5%), by 7.5%. In the DPO phase, it scored 16.66 in BLEU-1 and 27.44 in ROUGE-1 on the Huatuo-26M test set, bringing further improvement to the SFT phase (12.69 in BLEU-1 and 24.21 in ROUGE-1). Additionally, we have further enhanced the model's performance through the Retrieval Augmented Generation (RAG) approach. Experiments demonstrate that Qilin-Med-RAG achieves an accuracy rate of 42.8% on CMExam. These results highlight the contribution of our novel training approach in building LLMs for medical applications.
Knowledge Base Question Answering (KBQA) aims to answer natural language questions over large-scale knowledge bases (KBs), which can be summarized into two crucial steps: knowledge retrieval and semantic parsing. However, three core challenges remain: inefficient knowledge retrieval, mistakes of retrieval adversely impacting semantic parsing, and the complexity of previous KBQA methods. To tackle these challenges, we introduce ChatKBQA, a novel and simple generate-then-retrieve KBQA framework, which proposes first generating the logical form with fine-tuned LLMs, then retrieving and replacing entities and relations with an unsupervised retrieval method, to improve both generation and retrieval more directly. Experimental results show that ChatKBQA achieves new state-of-the-art performance on standard KBQA datasets, WebQSP, and CWQ. This work can also be regarded as a new paradigm for combining LLMs with knowledge graphs (KGs) for interpretable and knowledge-required question answering. Our code is publicly available.
Domain experts often rely on most recent knowledge for apprehending and disseminating specific biological processes that help them design strategies for developing prevention and therapeutic decision-making in various disease scenarios. A challenging scenarios for artificial intelligence (AI) is using biomedical data (e.g., texts, imaging, omics, and clinical) to provide diagnosis and treatment recommendations for cancerous conditions.~Data and knowledge about biomedical entities like cancer, drugs, genes, proteins, and their mechanism is spread across structured (knowledge bases (KBs)) and unstructured (e.g., scientific articles) sources. A large-scale knowledge graph (KG) can be constructed by integrating and extracting facts about semantically interrelated entities and relations. Such a KG not only allows exploration and question answering (QA) but also enables domain experts to deduce new knowledge. However, exploring and querying large-scale KGs is tedious for non-domain users due to their lack of understanding of the data assets and semantic technologies. In this paper, we develop a domain KG to leverage cancer-specific biomarker discovery and interactive QA. For this, we constructed a domain ontology called OncoNet Ontology (ONO), which enables semantic reasoning for validating gene-disease (different types of cancer) relations. The KG is further enriched by harmonizing the ONO, metadata, controlled vocabularies, and biomedical concepts from scientific articles by employing BioBERT- and SciBERT-based information extractors. Further, since the biomedical domain is evolving, where new findings often replace old ones, without having access to up-to-date scientific findings, there is a high chance an AI system exhibits concept drift while providing diagnosis and treatment. Therefore, we fine-tune the KG using large language models (LLMs) based on more recent articles and KBs.
Sanskrit (sa\d{m}sk\d{r}ta) enjoys one of the largest and most varied literature in the whole world. Extracting the knowledge from it, however, is a challenging task due to multiple reasons including complexity of the language and paucity of standard natural language processing tools. In this paper, we target the problem of building knowledge graphs for particular types of relationships from sa\d{m}sk\d{r}ta texts. We build a natural language question-answering system in sa\d{m}sk\d{r}ta that uses the knowledge graph to answer factoid questions. We design a framework for the overall system and implement two separate instances of the system on human relationships from mah\=abh\=arata and r\=am\=aya\d{n}a, and one instance on synonymous relationships from bh\=avaprak\=a\'sa nigha\d{n}\d{t}u, a technical text from \=ayurveda. We show that about 50% of the factoid questions can be answered correctly by the system. More importantly, we analyse the shortcomings of the system in detail for each step, and discuss the possible ways forward.
Given an image and an associated textual question, the purpose of Knowledge-Based Visual Question Answering (KB-VQA) is to provide a correct answer to the question with the aid of external knowledge bases. Prior KB-VQA models are usually formulated as a retriever-classifier framework, where a pre-trained retriever extracts textual or visual information from knowledge graphs and then makes a prediction among the candidates. Despite promising progress, there are two drawbacks with existing models. Firstly, modeling question-answering as multi-class classification limits the answer space to a preset corpus and lacks the ability of flexible reasoning. Secondly, the classifier merely consider "what is the answer" without "how to get the answer", which cannot ground the answer to explicit reasoning paths. In this paper, we confront the challenge of \emph{explainable open-set} KB-VQA, where the system is required to answer questions with entities at wild and retain an explainable reasoning path. To resolve the aforementioned issues, we propose a new retriever-ranker paradigm of KB-VQA, Graph pATH rankER (GATHER for brevity). Specifically, it contains graph constructing, pruning, and path-level ranking, which not only retrieves accurate answers but also provides inference paths that explain the reasoning process. To comprehensively evaluate our model, we reformulate the benchmark dataset OK-VQA with manually corrected entity-level annotations and release it as ConceptVQA. Extensive experiments on real-world questions demonstrate that our framework is not only able to perform open-set question answering across the whole knowledge base but provide explicit reasoning path.
The design and development of text-based knowledge graph completion (KGC) methods leveraging textual entity descriptions are at the forefront of research. These methods involve advanced optimization techniques such as soft prompts and contrastive learning to enhance KGC models. The effectiveness of text-based methods largely hinges on the quality and richness of the training data. Large language models (LLMs) can utilize straightforward prompts to alter text data, thereby enabling data augmentation for KGC. Nevertheless, LLMs typically demand substantial computational resources. To address these issues, we introduce a framework termed constrained prompts for KGC (CP-KGC). This CP-KGC framework designs prompts that adapt to different datasets to enhance semantic richness. Additionally, CP-KGC employs a context constraint strategy to effectively identify polysemous entities within KGC datasets. Through extensive experimentation, we have verified the effectiveness of this framework. Even after quantization, the LLM (Qwen-7B-Chat-int4) still enhances the performance of text-based KGC methods \footnote{Code and datasets are available at \href{https://github.com/sjlmg/CP-KGC}{https://github.com/sjlmg/CP-KGC}}. This study extends the performance limits of existing models and promotes further integration of KGC with LLMs.
Humans have a remarkable ability to perceive and reason about the world around them by understanding the relationships between objects. In this paper, we investigate the effectiveness of using such relationships for object detection and instance segmentation. To this end, we propose a Relational Prior-based Feature Enhancement Model (RP-FEM), a graph transformer that enhances object proposal features using relational priors. The proposed architecture operates on top of scene graphs obtained from initial proposals and aims to concurrently learn relational context modeling for object detection and instance segmentation. Experimental evaluations on COCO show that the utilization of scene graphs, augmented with relational priors, offer benefits for object detection and instance segmentation. RP-FEM demonstrates its capacity to suppress improbable class predictions within the image while also preventing the model from generating duplicate predictions, leading to improvements over the baseline model on which it is built.
Digital Twins (DT) are a promising concept in cyber-physical systems research due to their advanced features including monitoring and automated reasoning. Semantic technologies such as Knowledge Graphs (KG) are recently being utilized in DTs especially for information modelling. Building on this move, this paper proposes a pipeline for semantic association rule learning in DTs using KGs and time series data. In addition to this initial pipeline, we also propose new semantic association rule criterion. The approach is evaluated on an industrial water network scenario. Initial evaluation shows that the proposed approach is able to learn a high number of association rules with semantic information which are more generalizable. The paper aims to set a foundation for further work on using semantic association rule learning especially in the context of industrial applications.
Knowledge Graphs (KG) are the backbone of many data-intensive applications since they can represent data coupled with its meaning and context. Aligning KGs across different domains and providers is necessary to afford a fuller and integrated representation. A severe limitation of current KG alignment (KGA) algorithms is that they fail to articulate logical thinking and reasoning with lexical, structural, and semantic data learning. Deep learning models are increasingly popular for KGA inspired by their good performance in other tasks, but they suffer from limitations in explainability, reasoning, and data efficiency. Hybrid neurosymbolic learning models hold the promise of integrating logical and data perspectives to produce high-quality alignments that are explainable and support validation through human-centric approaches. This paper examines the current state of the art in KGA and explores the potential for neurosymbolic integration, highlighting promising research directions for combining these fields.