Reconstructing visual stimulus images is a significant task in neural decoding, and up to now, most studies consider the functional magnetic resonance imaging (fMRI) as the signal source. However, the fMRI-based image reconstruction methods are difficult to widely applied because of the complexity and high cost of the acquisition equipments. Considering the advantages of low cost and easy portability of the electroencephalogram (EEG) acquisition equipments, we propose a novel image reconstruction method based on EEG signals in this paper. Firstly, to satisfy the high recognizability of visual stimulus images in fast switching manner, we build a visual stimuli image dataset, and obtain the EEG dataset by a corresponding EEG signals collection experiment. Secondly, the deep visual representation model(DVRM) consisting of a primary encoder and a subordinate decoder is proposed to reconstruct visual stimuli. The encoder is designed based on the residual-in-residual dense blocks to learn the distribution characteristics between EEG signals and visual stimulus images, while the decoder is designed based on the deep neural network to reconstruct the visual stimulus image from the learned deep visual representation. The DVRM can fit the deep and multiview visual features of human natural state and make the reconstructed images more precise. Finally, we evaluate the DVRM in the quality of the generated images on our EEG dataset. The results show that the DVRM have good performance in the task of learning deep visual representation from EEG signals and generating reconstructed images that are realistic and highly resemble the original images.
Deciphering visual content from functional Magnetic Resonance Imaging (fMRI) helps illuminate the human vision system. However, the scarcity of fMRI data and noise hamper brain decoding model performance. Previous approaches primarily employ subject-specific models, sensitive to training sample size. In this paper, we explore a straightforward but overlooked solution to address data scarcity. We propose shallow subject-specific adapters to map cross-subject fMRI data into unified representations. Subsequently, a shared deeper decoding model decodes cross-subject features into the target feature space. During training, we leverage both visual and textual supervision for multi-modal brain decoding. Our model integrates a high-level perception decoding pipeline and a pixel-wise reconstruction pipeline guided by high-level perceptions, simulating bottom-up and top-down processes in neuroscience. Empirical experiments demonstrate robust neural representation learning across subjects for both pipelines. Moreover, merging high-level and low-level information improves both low-level and high-level reconstruction metrics. Additionally, we successfully transfer learned general knowledge to new subjects by training new adapters with limited training data. Compared to previous state-of-the-art methods, notably pre-training-based methods (Mind-Vis and fMRI-PTE), our approach achieves comparable or superior results across diverse tasks, showing promise as an alternative method for cross-subject fMRI data pre-training. Our code and pre-trained weights will be publicly released at https://github.com/YulongBonjour/See_Through_Their_Minds.
Measuring transient functional connectivity is an important challenge in Electroencephalogram (EEG) research. Here, the rich potential for insightful, discriminative information of brain activity offered by high temporal resolution is confounded by the inherent noise of the medium and the spurious nature of correlations computed over short temporal windows. We propose a novel methodology to overcome these problems called Filter Average Short-Term (FAST) functional connectivity. First, long-term, stable, functional connectivity is averaged across an entire study cohort for a given pair of Visual Short Term Memory (VSTM) tasks. The resulting average connectivity matrix, containing information on the strongest general connections for the tasks, is used as a filter to analyse the transient high temporal resolution functional connectivity of individual subjects. In simulations, we show that this method accurately discriminates differences in noisy Event-Related Potentials (ERPs) between two conditions where standard connectivity and other comparable methods fail. We then apply this to analyse activity related to visual short-term memory binding deficits in two cohorts of familial and sporadic Alzheimer's disease. Reproducible significant differences were found in the binding task with no significant difference in the shape task in the P300 ERP range. This allows new sensitive measurements of transient functional connectivity, which can be implemented to obtain results of clinical significance.
Reconstructing natural language from non-invasive electroencephalography (EEG) holds great promise as a language decoding technology for brain-computer interfaces (BCIs). However, EEG-based language decoding is still in its nascent stages, facing several technical issues such as: 1) Absence of a hybrid strategy that can effectively integrate cross-modality (between EEG and text) self-learning with intra-modality self-reconstruction of EEG features or textual sequences; 2) Under-utilization of large language models (LLMs) to enhance EEG-based language decoding. To address above issues, we propose the Contrastive EEG-Text Masked Autoencoder (CET-MAE), a novel model that orchestrates compound self-supervised learning across and within EEG and text through a dedicated multi-stream encoder. Furthermore, we develop a framework called E2T-PTR (EEG-to-Text decoding using Pretrained Transferable Representations), which leverages pre-trained modules alongside the EEG stream from CET-MAE and further enables an LLM (specifically BART) to decode text from EEG sequences. Comprehensive experiments conducted on the popular text-evoked EEG database, ZuCo, demonstrate the superiority of E2T-PTR, which outperforms the state-of-the-art in ROUGE-1 F1 and BLEU-4 scores by 8.34% and 32.21%, respectively. These results indicate significant advancements in the field and underscores the proposed framework's potential to enable more powerful and widespread BCI applications.
We introduce Brain-Artificial Intelligence Interfaces (BAIs) as a new class of Brain-Computer Interfaces (BCIs). Unlike conventional BCIs, which rely on intact cognitive capabilities, BAIs leverage the power of artificial intelligence to replace parts of the neuro-cognitive processing pipeline. BAIs allow users to accomplish complex tasks by providing high-level intentions, while a pre-trained AI agent determines low-level details. This approach enlarges the target audience of BCIs to individuals with cognitive impairments, a population often excluded from the benefits of conventional BCIs. We present the general concept of BAIs and illustrate the potential of this new approach with a Conversational BAI based on EEG. In particular, we show in an experiment with simulated phone conversations that the Conversational BAI enables complex communication without the need to generate language. Our work thus demonstrates, for the first time, the ability of a speech neuroprosthesis to enable fluent communication in realistic scenarios with non-invasive technologies.
Neural representations induced by naturalistic stimuli offer insights into how humans respond to stimuli in daily life. Understanding neural mechanisms underlying naturalistic stimuli processing hinges on the precise identification and extraction of the shared neural patterns that are consistently present across individuals. Targeting the Electroencephalogram (EEG) technique, known for its rich spatial and temporal information, this study presents a framework for Contrastive Learning of Shared SpatioTemporal EEG Representations across individuals (CL-SSTER). CL-SSTER utilizes contrastive learning to maximize the similarity of EEG representations across individuals for identical stimuli, contrasting with those for varied stimuli. The network employed spatial and temporal convolutions to simultaneously learn the spatial and temporal patterns inherent in EEG. The versatility of CL-SSTER was demonstrated on three EEG datasets, including a synthetic dataset, a natural speech comprehension EEG dataset, and an emotional video watching EEG dataset. CL-SSTER attained the highest inter-subject correlation (ISC) values compared to the state-of-the-art ISC methods. The latent representations generated by CL-SSTER exhibited reliable spatiotemporal EEG patterns, which can be explained by properties of the naturalistic stimuli. CL-SSTER serves as an interpretable and scalable framework for the identification of inter-subject shared neural representations in naturalistic neuroscience.
In this study, we tackle a modern research challenge within the field of perceptual brain decoding, which revolves around synthesizing images from EEG signals using an adversarial deep learning framework. The specific objective is to recreate images belonging to various object categories by leveraging EEG recordings obtained while subjects view those images. To achieve this, we employ a Transformer-encoder based EEG encoder to produce EEG encodings, which serve as inputs to the generator component of the GAN network. Alongside the adversarial loss, we also incorporate perceptual loss to enhance the quality of the generated images.
In the era of Artificial Intelligence Generated Content (AIGC), conditional multimodal synthesis technologies (e.g., text-to-image, text-to-video, text-to-audio, etc) are gradually reshaping the natural content in the real world. The key to multimodal synthesis technology is to establish the mapping relationship between different modalities. Brain signals, serving as potential reflections of how the brain interprets external information, exhibit a distinctive One-to-Many correspondence with various external modalities. This correspondence makes brain signals emerge as a promising guiding condition for multimodal content synthesis. Brian-conditional multimodal synthesis refers to decoding brain signals back to perceptual experience, which is crucial for developing practical brain-computer interface systems and unraveling complex mechanisms underlying how the brain perceives and comprehends external stimuli. This survey comprehensively examines the emerging field of AIGC-based Brain-conditional Multimodal Synthesis, termed AIGC-Brain, to delineate the current landscape and future directions. To begin, related brain neuroimaging datasets, functional brain regions, and mainstream generative models are introduced as the foundation of AIGC-Brain decoding and analysis. Next, we provide a comprehensive taxonomy for AIGC-Brain decoding models and present task-specific representative work and detailed implementation strategies to facilitate comparison and in-depth analysis. Quality assessments are then introduced for both qualitative and quantitative evaluation. Finally, this survey explores insights gained, providing current challenges and outlining prospects of AIGC-Brain. Being the inaugural survey in this domain, this paper paves the way for the progress of AIGC-Brain research, offering a foundational overview to guide future work.
The release of large datasets and developments in AI have led to dramatic improvements in decoding methods that reconstruct seen images from human brain activity. We evaluate the prospect of further improving recent decoding methods by optimizing for consistency between reconstructions and brain activity during inference. We sample seed reconstructions from a base decoding method, then iteratively refine these reconstructions using a brain-optimized encoding model that maps images to brain activity. At each iteration, we sample a small library of images from an image distribution (a diffusion model) conditioned on a seed reconstruction from the previous iteration. We select those that best approximate the measured brain activity when passed through our encoding model, and use these images for structural guidance during the generation of the small library in the next iteration. We reduce the stochasticity of the image distribution at each iteration, and stop when a criterion on the "width" of the image distribution is met. We show that when this process is applied to recent decoding methods, it outperforms the base decoding method as measured by human raters, a variety of image feature metrics, and alignment to brain activity. These results demonstrate that reconstruction quality can be significantly improved by explicitly aligning decoding distributions to brain activity distributions, even when the seed reconstruction is output from a state-of-the-art decoding algorithm. Interestingly, the rate of refinement varies systematically across visual cortex, with earlier visual areas generally converging more slowly and preferring narrower image distributions, relative to higher-level brain areas. Brain-optimized inference thus offers a succinct and novel method for improving reconstructions and exploring the diversity of representations across visual brain areas.
In this paper, we introduce Recon3DMind, an innovative task aimed at reconstructing 3D visuals from Functional Magnetic Resonance Imaging (fMRI) signals, marking a significant advancement in the fields of cognitive neuroscience and computer vision. To support this pioneering task, we present the fMRI-Shape dataset, which includes data from 14 participants and features 360-degree videos of 3D objects to enable comprehensive fMRI signal capture across various settings, thereby laying a foundation for future research. Furthermore, we propose MinD-3D, a novel and effective three-stage framework specifically designed to decode the brain's 3D visual information from fMRI signals, demonstrating the feasibility of this challenging task. The framework begins by extracting and aggregating features from fMRI frames through a neuro-fusion encoder, subsequently employs a feature bridge diffusion model to generate visual features, and ultimately recovers the 3D object via a generative transformer decoder. We assess the performance of MinD-3D using a suite of semantic and structural metrics and analyze the correlation between the features extracted by our model and the visual regions of interest (ROIs) in fMRI signals. Our findings indicate that MinD-3D not only reconstructs 3D objects with high semantic relevance and spatial similarity but also significantly enhances our understanding of the human brain's capabilities in processing 3D visual information. Project page at: https://jianxgao.github.io/MinD-3D.
Deep learning is leading to major advances in the realm of brain decoding from functional Magnetic Resonance Imaging (fMRI). However, the large inter-subject variability in brain characteristics has limited most studies to train models on one subject at a time. Consequently, this approach hampers the training of deep learning models, which typically requires very large datasets. Here, we propose to boost brain decoding by aligning brain responses to videos and static images across subjects. Compared to the anatomically-aligned baseline, our method improves out-of-subject decoding performance by up to 75%. Moreover, it also outperforms classical single-subject approaches when fewer than 100 minutes of data is available for the tested subject. Furthermore, we propose a new multi-subject alignment method, which obtains comparable results to that of classical single-subject approaches while improving out-of-subject generalization. Finally, we show that this method aligns neural representations in accordance with brain anatomy. Overall, this study lays the foundations for leveraging extensive neuroimaging datasets and enhancing the decoding of individuals with a limited amount of brain recordings.
The limited data availability and the low signal-to-noise ratio of fMRI signals lead to the challenging task of fMRI-to-image retrieval. State-of-the-art MindEye remarkably improves fMRI-to-image retrieval performance by leveraging a large model, i.e., a 996M MLP Backbone per subject, to align fMRI embeddings to the final hidden layer of CLIP's Vision Transformer (ViT). However, significant individual variations exist among subjects, even under identical experimental setups, mandating the training of large subject-specific models. The substantial parameters pose significant challenges in deploying fMRI decoding on practical devices. To this end, we propose Lite-Mind, a lightweight, efficient, and robust brain representation learning paradigm based on Discrete Fourier Transform (DFT), which efficiently aligns fMRI voxels to fine-grained information of CLIP. We elaborately design a DFT backbone with Spectrum Compression and Frequency Projector modules to learn informative and robust voxel embeddings. Our experiments demonstrate that Lite-Mind achieves an impressive 94.6% fMRI-to-image retrieval accuracy on the NSD dataset for Subject 1, with 98.7% fewer parameters than MindEye. Lite-Mind is also proven to be able to be migrated to smaller fMRI datasets and establishes a new state-of-the-art for zero-shot classification on the GOD dataset.
In the past five years, the use of generative and foundational AI systems has greatly improved the decoding of brain activity. Visual perception, in particular, can now be decoded from functional Magnetic Resonance Imaging (fMRI) with remarkable fidelity. This neuroimaging technique, however, suffers from a limited temporal resolution ($\approx$0.5 Hz) and thus fundamentally constrains its real-time usage. Here, we propose an alternative approach based on magnetoencephalography (MEG), a neuroimaging device capable of measuring brain activity with high temporal resolution ($\approx$5,000 Hz). For this, we develop an MEG decoding model trained with both contrastive and regression objectives and consisting of three modules: i) pretrained embeddings obtained from the image, ii) an MEG module trained end-to-end and iii) a pretrained image generator. Our results are threefold: Firstly, our MEG decoder shows a 7X improvement of image-retrieval over classic linear decoders. Second, late brain responses to images are best decoded with DINOv2, a recent foundational image model. Third, image retrievals and generations both suggest that high-level visual features can be decoded from MEG signals, although the same approach applied to 7T fMRI also recovers better low-level features. Overall, these results, while preliminary, provide an important step towards the decoding -- in real-time -- of the visual processes continuously unfolding within the human brain.
This paper presents BELT, a novel model and learning framework for the pivotal topic of brain-to-language translation research. The translation from noninvasive brain signals into readable natural language has the potential to promote the application scenario as well as the development of brain-computer interfaces (BCI) as a whole. The critical problem in brain signal decoding or brain-to-language translation is the acquisition of semantically appropriate and discriminative EEG representation from a dataset of limited scale and quality. The proposed BELT method is a generic and efficient framework that bootstraps EEG representation learning using off-the-shelf large-scale pretrained language models (LMs). With a large LM's capacity for understanding semantic information and zero-shot generalization, BELT utilizes large LMs trained on Internet-scale datasets to bring significant improvements to the understanding of EEG signals. In particular, the BELT model is composed of a deep conformer encoder and a vector quantization encoder. Semantical EEG representation is achieved by a contrastive learning step that provides natural language supervision. We achieve state-of-the-art results on two featuring brain decoding tasks including the brain-to-language translation and zero-shot sentiment classification. Specifically, our model surpasses the baseline model on both tasks by 5.45% and over 10% and archives a 42.31% BLEU-1 score and 67.32% precision on the main evaluation metrics for translation and zero-shot sentiment classification respectively.
Decoding visual representations from human brain activity has emerged as a thriving research domain, particularly in the context of brain-computer interfaces. Our study presents an innovative method that employs to classify and reconstruct images from the ImageNet dataset using electroencephalography (EEG) data from subjects that had viewed the images themselves (i.e. "brain decoding"). We analyzed EEG recordings from 6 participants, each exposed to 50 images spanning 40 unique semantic categories. These EEG readings were converted into spectrograms, which were then used to train a convolutional neural network (CNN), integrated with a knowledge distillation procedure based on a pre-trained Contrastive Language-Image Pre-Training (CLIP)-based image classification teacher network. This strategy allowed our model to attain a top-5 accuracy of 80%, significantly outperforming a standard CNN and various RNN-based benchmarks. Additionally, we incorporated an image reconstruction mechanism based on pre-trained latent diffusion models, which allowed us to generate an estimate of the images which had elicited EEG activity. Therefore, our architecture not only decodes images from neural activity but also offers a credible image reconstruction from EEG only, paving the way for e.g. swift, individualized feedback experiments. Our research represents a significant step forward in connecting neural signals with visual cognition.
Previous brain decoding research primarily involves single-subject studies, reconstructing stimuli via fMRI activity from the same subject. Our study aims to introduce a generalization technique for cross-subject brain decoding, facilitated by exploring data alignment methods. We utilized the NSD dataset, a comprehensive 7T fMRI vision experiment involving multiple subjects exposed to 9841 images, 982 of which were viewed by all. Our approach involved training a decoding model on one subject, aligning others' data to this space, and testing the decoding on the second subject. We compared ridge regression, hyper alignment, and anatomical alignment techniques for fMRI data alignment. We established that cross-subject brain decoding is feasible, even using around 10% of the total data, or 982 common images, with comparable performance to single-subject decoding. Ridge regression was the best method for functional alignment. Through subject alignment, we achieved superior brain decoding and a potential 90% reduction in scan time. This could pave the way for more efficient experiments and further advancements in the field, typically requiring an exorbitant 20-hour scan time per subject.
Image reconstruction and captioning from brain activity evoked by visual stimuli allow researchers to further understand the connection between the human brain and the visual perception system. While deep generative models have recently been employed in this field, reconstructing realistic captions and images with both low-level details and high semantic fidelity is still a challenging problem. In this work, we propose UniBrain: Unify Image Reconstruction and Captioning All in One Diffusion Model from Human Brain Activity. For the first time, we unify image reconstruction and captioning from visual-evoked functional magnetic resonance imaging (fMRI) through a latent diffusion model termed Versatile Diffusion. Specifically, we transform fMRI voxels into text and image latent for low-level information and guide the backward diffusion process through fMRI-based image and text conditions derived from CLIP to generate realistic captions and images. UniBrain outperforms current methods both qualitatively and quantitatively in terms of image reconstruction and reports image captioning results for the first time on the Natural Scenes Dataset (NSD) dataset. Moreover, the ablation experiments and functional region-of-interest (ROI) analysis further exhibit the superiority of UniBrain and provide comprehensive insight for visual-evoked brain decoding.
We explore a new class of brain encoding model by adding memory-related information as input. Memory is an essential brain mechanism that works alongside visual stimuli. During a vision-memory cognitive task, we found the non-visual brain is largely predictable using previously seen images. Our Memory Encoding Model (Mem) won the Algonauts 2023 visual brain competition even without model ensemble (single model score 66.8, ensemble score 70.8). Our ensemble model without memory input (61.4) can also stand a 3rd place. Furthermore, we observe periodic delayed brain response correlated to 6th-7th prior image, and hippocampus also showed correlated activity timed with this periodicity. We conjuncture that the periodic replay could be related to memory mechanism to enhance the working memory.
Brain encoding models aim to predict brain voxel-wise responses to stimuli images, replicating brain signals captured by neuroimaging techniques. There is a large volume of publicly available data, but training a comprehensive brain encoding model is challenging. The main difficulties stem from a) diversity within individual brain, with functional heterogeneous brain regions; b) diversity of brains from different subjects, due to genetic and developmental differences; c) diversity of imaging modalities and processing pipelines. We use this diversity to our advantage by introducing the All-for-One training recipe, which divides the challenging one-big-model problem into multiple small models, with the small models aggregating the knowledge while preserving the distinction between the different functional regions. Agnostic of the training recipe, we use biological knowledge of the brain, specifically retinotopy, to introduce inductive bias to learn a 3D brain-to-image mapping that ensures a) each neuron knows which image regions and semantic levels to gather information, and b) no neurons are left behind in the model. We pre-trained a brain encoding model using over one million data points from five public datasets spanning three imaging modalities. To the best of our knowledge, this is the most comprehensive brain encoding model to the date. We demonstrate the effectiveness of the pre-trained model as a drop-in replacement for commonly used vision backbone models. Furthermore, we demonstrate the application of the model to brain decoding. Code and the model checkpoint will be made available.
Decoding text stimuli from cognitive signals (e.g. fMRI) enhances our understanding of the human language system, paving the way for building versatile Brain-Computer Interface. However, existing studies largely focus on decoding individual word-level fMRI volumes from a restricted vocabulary, which is far too idealized for real-world application. In this paper, we propose fMRI2text, the first openvocabulary task aiming to bridge fMRI time series and human language. Furthermore, to explore the potential of this new task, we present a baseline solution, UniCoRN: the Unified Cognitive Signal ReconstructioN for Brain Decoding. By reconstructing both individual time points and time series, UniCoRN establishes a robust encoder for cognitive signals (fMRI & EEG). Leveraging a pre-trained language model as decoder, UniCoRN proves its efficacy in decoding coherent text from fMRI series across various split settings. Our model achieves a 34.77% BLEU score on fMRI2text, and a 37.04% BLEU when generalized to EEGto-text decoding, thereby surpassing the former baseline. Experimental results indicate the feasibility of decoding consecutive fMRI volumes, and the effectiveness of decoding different cognitive signals using a unified structure.