Understanding and leveraging the 3D structures of proteins is central to a variety of biological and drug discovery tasks. While deep learning has been applied successfully for structure-based protein function prediction tasks, current methods usually employ distinct training for each task. However, each of the tasks is of small size, and such a single-task strategy hinders the models' performance and generalization ability. As some labeled 3D protein datasets are biologically related, combining multi-source datasets for larger-scale multi-task learning is one way to overcome this problem. In this paper, we propose a neural network model to address multiple tasks jointly upon the input of 3D protein structures. In particular, we first construct a standard structure-based multi-task benchmark called Protein-MT, consisting of 6 biologically relevant tasks, including affinity prediction and property prediction, integrated from 4 public datasets. Then, we develop a novel graph neural network for multi-task learning, dubbed Heterogeneous Multichannel Equivariant Network (HeMeNet), which is E(3) equivariant and able to capture heterogeneous relationships between different atoms. Besides, HeMeNet can achieve task-specific learning via the task-aware readout mechanism. Extensive evaluations on our benchmark verify the effectiveness of multi-task learning, and our model generally surpasses state-of-the-art models.
This paper presents two methodological advancements in decentralized multi-task learning under privacy constraints, aiming to pave the way for future developments in next-generation Blockchain platforms. First, we expand the existing framework for collaborative dictionary learning (CollabDict), which has previously been limited to Gaussian mixture models, by incorporating deep variational autoencoders (VAEs) into the framework, with a particular focus on anomaly detection. We demonstrate that the VAE-based anomaly score function shares the same mathematical structure as the non-deep model, and provide comprehensive qualitative comparison. Second, considering the widespread use of "pre-trained models," we provide a mathematical analysis on data privacy leakage when models trained with CollabDict are shared externally. We show that the CollabDict approach, when applied to Gaussian mixtures, adheres to a Renyi differential privacy criterion. Additionally, we propose a practical metric for monitoring internal privacy breaches during the learning process.
Multi-task learning (MTL) is a paradigm that simultaneously learns multiple tasks by sharing information at different levels, enhancing the performance of each individual task. While previous research has primarily focused on feature-level or parameter-level task relatedness, and proposed various model architectures and learning algorithms to improve learning performance, we aim to explore output-level task relatedness. This approach introduces a posteriori information into the model, considering that different tasks may produce correlated outputs with mutual influences. We achieve this by incorporating a feedback mechanism into MTL models, where the output of one task serves as a hidden feature for another task, thereby transforming a static MTL model into a dynamic one. To ensure the training process converges, we introduce a convergence loss that measures the trend of a task's outputs during each iteration. Additionally, we propose a Gumbel gating mechanism to determine the optimal projection of feedback signals. We validate the effectiveness of our method and evaluate its performance through experiments conducted on several baseline models in spoken language understanding.
Fundus image segmentation on unseen domains is challenging, especially for the over-parameterized deep models trained on the small medical datasets. To address this challenge, we propose a method named Adaptive Feature-fusion Neural Network (AFNN) for glaucoma segmentation on unseen domains, which mainly consists of three modules: domain adaptor, feature-fusion network, and self-supervised multi-task learning. Specifically, the domain adaptor helps the pretrained-model fast adapt from other image domains to the medical fundus image domain. Feature-fusion network and self-supervised multi-task learning for the encoder and decoder are introduced to improve the domain generalization ability. In addition, we also design the weighted-dice-loss to improve model performance on complex optic-cup segmentation tasks. Our proposed method achieves a competitive performance over existing fundus segmentation methods on four public glaucoma datasets.
Scene Graph Generation (SGG) is a challenging task of detecting objects and predicting relationships between objects. After DETR was developed, one-stage SGG models based on a one-stage object detector have been actively studied. However, complex modeling is used to predict the relationship between objects, and the inherent relationship between object queries learned in the multi-head self-attention of the object detector has been neglected. We propose a lightweight one-stage SGG model that extracts the relation graph from the various relationships learned in the multi-head self-attention layers of the DETR decoder. By fully utilizing the self-attention by-products, the relation graph can be extracted effectively with a shallow relation extraction head. Considering the dependency of the relation extraction task on the object detection task, we propose a novel relation smoothing technique that adjusts the relation label adaptively according to the quality of the detected objects. By the relation smoothing, the model is trained according to the continuous curriculum that focuses on object detection task at the beginning of training and performs multi-task learning as the object detection performance gradually improves. Furthermore, we propose a connectivity prediction task that predicts whether a relation exists between object pairs as an auxiliary task of the relation extraction. We demonstrate the effectiveness and efficiency of our method for the Visual Genome and Open Image V6 datasets. Our code is publicly available at https://github.com/naver-ai/egtr.
Multi-task learning has become increasingly popular in the machine learning field, but its practicality is hindered by the need for large, labeled datasets. Most multi-task learning methods depend on fully labeled datasets wherein each input example is accompanied by ground-truth labels for all target tasks. Unfortunately, curating such datasets can be prohibitively expensive and impractical, especially for dense prediction tasks which require per-pixel labels for each image. With this in mind, we propose Joint-Task Regularization (JTR), an intuitive technique which leverages cross-task relations to simultaneously regularize all tasks in a single joint-task latent space to improve learning when data is not fully labeled for all tasks. JTR stands out from existing approaches in that it regularizes all tasks jointly rather than separately in pairs -- therefore, it achieves linear complexity relative to the number of tasks while previous methods scale quadratically. To demonstrate the validity of our approach, we extensively benchmark our method across a wide variety of partially labeled scenarios based on NYU-v2, Cityscapes, and Taskonomy.
Using single-task deep learning methods to reconstruct Magnetic Resonance Imaging (MRI) data acquired with different imaging sequences is inherently challenging. The trained deep learning model typically lacks generalizability, and the dissimilarity among image datasets with different types of contrast leads to suboptimal learning performance. This paper proposes a meta-learning approach to efficiently learn image features from multiple MR image datasets. Our algorithm can perform multi-task learning to simultaneously reconstruct MR images acquired using different imaging sequences with different image contrasts. The experiment results demonstrate the ability of our new meta-learning reconstruction method to successfully reconstruct highly-undersampled k-space data from multiple MRI datasets simultaneously, outperforming other compelling reconstruction methods previously developed for single-task learning.
Visual Place Recognition aims at recognizing previously visited places by relying on visual clues, and it is used in robotics applications for SLAM and localization. Since typically a mobile robot has access to a continuous stream of frames, this task is naturally cast as a sequence-to-sequence localization problem. Nevertheless, obtaining sequences of labelled data is much more expensive than collecting isolated images, which can be done in an automated way with little supervision. As a mitigation to this problem, we propose a novel Joint Image and Sequence Training protocol (JIST) that leverages large uncurated sets of images through a multi-task learning framework. With JIST we also introduce SeqGeM, an aggregation layer that revisits the popular GeM pooling to produce a single robust and compact embedding from a sequence of single-frame embeddings. We show that our model is able to outperform previous state of the art while being faster, using 8 times smaller descriptors, having a lighter architecture and allowing to process sequences of various lengths. Code is available at https://github.com/ga1i13o/JIST
Adapting models pre-trained on large-scale datasets to a variety of downstream tasks is a common strategy in deep learning. Consequently, parameter-efficient fine-tuning methods have emerged as a promising way to adapt pre-trained models to different tasks while training only a minimal number of parameters. While most of these methods are designed for single-task adaptation, parameter-efficient training in Multi-Task Learning (MTL) architectures is still unexplored. In this paper, we introduce MTLoRA, a novel framework for parameter-efficient training of MTL models. MTLoRA employs Task-Agnostic and Task-Specific Low-Rank Adaptation modules, which effectively disentangle the parameter space in MTL fine-tuning, thereby enabling the model to adeptly handle both task specialization and interaction within MTL contexts. We applied MTLoRA to hierarchical-transformer-based MTL architectures, adapting them to multiple downstream dense prediction tasks. Our extensive experiments on the PASCAL dataset show that MTLoRA achieves higher accuracy on downstream tasks compared to fully fine-tuning the MTL model while reducing the number of trainable parameters by 3.6x. Furthermore, MTLoRA establishes a Pareto-optimal trade-off between the number of trainable parameters and the accuracy of the downstream tasks, outperforming current state-of-the-art parameter-efficient training methods in both accuracy and efficiency. Our code is publicly available.
The widespread adoption of Large Language Models (LLMs) has facilitated numerous benefits. However, hallucination is a significant concern. In response, Retrieval Augmented Generation (RAG) has emerged as a highly promising paradigm to improve LLM outputs by grounding them in factual information. RAG relies on textual entailment (TE) or similar methods to check if the text produced by LLMs is supported or contradicted, compared to retrieved documents. This paper argues that conventional TE methods are inadequate for spotting hallucinations in content generated by LLMs. For instance, consider a prompt about the 'USA's stance on the Ukraine war''. The AI-generated text states, ...U.S. President Barack Obama says the U.S. will not put troops in Ukraine...'' However, during the war the U.S. president is Joe Biden which contradicts factual reality. Moreover, current TE systems are unable to accurately annotate the given text and identify the exact portion that is contradicted. To address this, we introduces a new type of TE called ``Factual Entailment (FE).'', aims to detect factual inaccuracies in content generated by LLMs while also highlighting the specific text segment that contradicts reality. We present FACTOID (FACTual enTAILment for hallucInation Detection), a benchmark dataset for FE. We propose a multi-task learning (MTL) framework for FE, incorporating state-of-the-art (SoTA) long text embeddings such as e5-mistral-7b-instruct, along with GPT-3, SpanBERT, and RoFormer. The proposed MTL architecture for FE achieves an avg. 40\% improvement in accuracy on the FACTOID benchmark compared to SoTA TE methods. As FE automatically detects hallucinations, we assessed 15 modern LLMs and ranked them using our proposed Auto Hallucination Vulnerability Index (HVI_auto). This index quantifies and offers a comparative scale to evaluate and rank LLMs according to their hallucinations.
Addressing the challenges related to data sparsity, cold-start problems, and diversity in recommendation systems is both crucial and demanding. Many current solutions leverage knowledge graphs to tackle these issues by combining both item-based and user-item collaborative signals. A common trend in these approaches focuses on improving ranking performance at the cost of escalating model complexity, reducing diversity, and complicating the task. It is essential to provide recommendations that are both personalized and diverse, rather than solely relying on achieving high rank-based performance, such as Click-through Rate, Recall, etc. In this paper, we propose a hybrid multi-task learning approach, training on user-item and item-item interactions. We apply item-based contrastive learning on descriptive text, sampling positive and negative pairs based on item metadata. Our approach allows the model to better understand the relationships between entities within the knowledge graph by utilizing semantic information from text. It leads to more accurate, relevant, and diverse user recommendations and a benefit that extends even to cold-start users who have few interactions with items. We perform extensive experiments on two widely used datasets to validate the effectiveness of our approach. Our findings demonstrate that jointly training user-item interactions and item-based signals using synopsis text is highly effective. Furthermore, our results provide evidence that item-based contrastive learning enhances the quality of entity embeddings, as indicated by metrics such as uniformity and alignment.
As user behaviors become complicated on business platforms, online recommendations focus more on how to touch the core conversions, which are highly related to the interests of platforms. These core conversions are usually continuous targets, such as \textit{watch time}, \textit{revenue}, and so on, whose predictions can be enhanced by previous discrete conversion actions. Therefore, multi-task learning (MTL) can be adopted as the paradigm to learn these hybrid targets. However, existing works mainly emphasize investigating the sequential dependence among discrete conversion actions, which neglects the complexity of dependence between discrete conversions and the final continuous conversion. Moreover, simultaneously optimizing hybrid tasks with stronger task dependence will suffer from volatile issues where the core regression task might have a larger influence on other tasks. In this paper, we study the MTL problem with hybrid targets for the first time and propose the model named Hybrid Targets Learning Network (HTLNet) to explore task dependence and enhance optimization. Specifically, we introduce label embedding for each task to explicitly transfer the label information among these tasks, which can effectively explore logical task dependence. We also further design the gradient adjustment regime between the final regression task and other classification tasks to enhance the optimization. Extensive experiments on two offline public datasets and one real-world industrial dataset are conducted to validate the effectiveness of HTLNet. Moreover, online A/B tests on the financial recommender system also show that our model has improved significantly. Our implementation is available here\footnote{\url{https://github.com/fuyuanlyu/HTLNet}}.
FastCAR is a novel task consolidation approach in Multi-Task Learning (MTL) for a classification and a regression task, despite task heterogeneity with only subtle correlation. It addresses object classification and continuous property variable regression, a crucial use case in science and engineering. FastCAR involves a labeling transformation approach that can be used with a single-task regression network architecture. FastCAR outperforms traditional MTL model families, parametrized in the landscape of architecture and loss weighting schemes, when learning of both tasks are collectively considered (classification accuracy of 99.54%, regression mean absolute percentage error of 2.3%). The experiments performed used an Advanced Steel Property dataset contributed by us. The dataset comprises 4536 images of 224x224 pixels, annotated with object classes and hardness properties that take continuous values. With the labeling transformation and single-task regression network architecture, FastCAR achieves reduced latency and time efficiency.
Purpose: As visual inspection is an inherent process during radiological screening, the associated eye gaze data can provide valuable insights into relevant clinical decisions. As deep learning has become the state-of-the-art for computer-assisted diagnosis, integrating human behavior, such as eye gaze data, into these systems is instrumental to help align machine predictions with clinical diagnostic criteria, thus enhancing the quality of automatic radiological diagnosis. Methods: We propose a novel deep learning framework for joint disease diagnosis and prediction of corresponding clinical visual attention maps for chest X-ray scans. Specifically, we introduce a new dual-encoder multi-task UNet, which leverages both a DenseNet201 backbone and a Residual and Squeeze-and-Excitation block-based encoder to extract diverse features for visual attention map prediction, and a multi-scale feature-fusion classifier to perform disease classification. To tackle the issue of asynchronous training schedules of individual tasks in multi-task learning, we proposed a multi-stage cooperative learning strategy, with contrastive learning for feature encoder pretraining to boost performance. Results: Our proposed method is shown to significantly outperform existing techniques for chest X-ray diagnosis (AUC=0.93) and the quality of visual attention map prediction (Correlation coefficient=0.58). Conclusion: Benefiting from the proposed multi-task multi-stage cooperative learning, our technique demonstrates the benefit of integrating clinicians' eye gaze into clinical AI systems to boost performance and potentially explainability.
The radar signal processing algorithm is one of the core components in through-wall radar human detection technology. Traditional algorithms (e.g., DFT and matched filtering) struggle to adaptively handle low signal-to-noise ratio echo signals in challenging and dynamic real-world through-wall application environments, which becomes a major bottleneck in the system. In this paper, we introduce an end-to-end through-wall radar human detection network (TWP-CNN), which takes raw radar Analog-to-Digital Converter (ADC) signals without any preprocessing as input. We replace the conventional radar signal processing flow with the proposed DFT-based adaptive feature extraction (DAFE) module. This module employs learnable parameterized 3D complex convolution layers to extract superior feature representations from ADC signals, which is beyond the limitation of traditional preprocessing methods. Additionally, by embedding phase information from radar data within the network and employing multi-task learning, a more accurate detection is achieved. Finally, due to the absence of through-wall radar datasets containing raw ADC data, we gathered a realistic through-wall (RTW) dataset using our in-house developed through-wall radar system. We trained and validated our proposed method on this dataset to confirm its effectiveness and superiority in real through-wall detection scenarios.
In information retrieval, facet identification of a user query is an important task. If a search service can recognize the facets of a user's query, it has the potential to offer users a much broader range of search results. Previous studies can enhance facet prediction by leveraging retrieved documents and related queries obtained through a search engine. However, there are challenges in extending it to other applications when a search engine operates as part of the model. First, search engines are constantly updated. Therefore, additional information may change during training and test, which may reduce performance. The second challenge is that public search engines cannot search for internal documents. Therefore, a separate search system needs to be built to incorporate documents from private domains within the company. We propose two strategies that focus on a framework that can predict facets by taking only queries as input without a search engine. The first strategy is multi-task learning to predict SERP. By leveraging SERP as a target instead of a source, the proposed model deeply understands queries without relying on external modules. The second strategy is to enhance the facets by combining Large Language Model (LLM) and the small model. Overall performance improves when small model and LLM are combined rather than facet generation individually.
Multi-task learning solves multiple correlated tasks. However, conflicts may exist between them. In such circumstances, a single solution can rarely optimize all the tasks, leading to performance trade-offs. To arrive at a set of optimized yet well-distributed models that collectively embody different trade-offs in one algorithmic pass, this paper proposes to view Pareto multi-task learning through the lens of multi-task optimization. Multi-task learning is first cast as a multi-objective optimization problem, which is then decomposed into a diverse set of unconstrained scalar-valued subproblems. These subproblems are solved jointly using a novel multi-task gradient descent method, whose uniqueness lies in the iterative transfer of model parameters among the subproblems during the course of optimization. A theorem proving faster convergence through the inclusion of such transfers is presented. We investigate the proposed multi-task learning with multi-task optimization for solving various problem settings including image classification, scene understanding, and multi-target regression. Comprehensive experiments confirm that the proposed method significantly advances the state-of-the-art in discovering sets of Pareto-optimized models. Notably, on the large image dataset we tested on, namely NYUv2, the hypervolume convergence achieved by our method was found to be nearly two times faster than the next-best among the state-of-the-art.
Bipolar disorder (BD) and schizophrenia (SZ) are severe mental disorders with profound societal impact. Identifying risk markers early is crucial for understanding disease progression and enabling preventive measures. The Danish High Risk and Resilience Study (VIA) focuses on understanding early disease processes, particularly in children with familial high risk (FHR). Understanding structural brain changes associated with these diseases during early stages is essential for effective interventions. The central sulcus (CS) is a prominent brain landmark related to brain regions involved in motor and sensory processing. Analyzing CS morphology can provide valuable insights into neurodevelopmental abnormalities in the FHR group. However, segmenting the central sulcus (CS) presents challenges due to its variability, especially in adolescents. This study introduces two novel approaches to improve CS segmentation: synthetic data generation to model CS variability and self-supervised pre-training with multi-task learning to adapt models to new cohorts. These methods aim to enhance segmentation performance across diverse populations, eliminating the need for extensive preprocessing.
The construction of large open knowledge bases (OKBs) is integral to many knowledge-driven applications on the world wide web such as web search. However, noun phrases and relational phrases in OKBs often suffer from redundancy and ambiguity, which calls for the investigation on OKB canonicalization. Current solutions address OKB canonicalization by devising advanced clustering algorithms and using knowledge graph embedding (KGE) to further facilitate the canonicalization process. Nevertheless, these works fail to fully exploit the synergy between clustering and KGE learning, and the methods designed for these subtasks are sub-optimal. To this end, we put forward a multi-task learning framework, namely MulCanon, to tackle OKB canonicalization. In addition, diffusion model is used in the soft clustering process to improve the noun phrase representations with neighboring information, which can lead to more accurate representations. MulCanon unifies the learning objectives of these sub-tasks, and adopts a two-stage multi-task learning paradigm for training. A thorough experimental study on popular OKB canonicalization benchmarks validates that MulCanon can achieve competitive canonicalization results.
Multi-task robot learning holds significant importance in tackling diverse and complex scenarios. However, current approaches are hindered by performance issues and difficulties in collecting training datasets. In this paper, we propose GeRM (Generalist Robotic Model). We utilize offline reinforcement learning to optimize data utilization strategies to learn from both demonstrations and sub-optimal data, thus surpassing the limitations of human demonstrations. Thereafter, we employ a transformer-based VLA network to process multi-modal inputs and output actions. By introducing the Mixture-of-Experts structure, GeRM allows faster inference speed with higher whole model capacity, and thus resolves the issue of limited RL parameters, enhancing model performance in multi-task learning while controlling computational costs. Through a series of experiments, we demonstrate that GeRM outperforms other methods across all tasks, while also validating its efficiency in both training and inference processes. Additionally, we uncover its potential to acquire emergent skills. Additionally, we contribute the QUARD-Auto dataset, collected automatically to support our training approach and foster advancements in multi-task quadruped robot learning. This work presents a new paradigm for reducing the cost of collecting robot data and driving progress in the multi-task learning community. You can reach our project and video through the link: https://songwxuan.github.io/GeRM/ .