Low-rank modeling generally refers to a class of methods that solve problems by representing variables of interest as low-rank matrices. It has achieved great success in various fields including computer vision, data mining, signal processing and bioinformatics. Recently, much progress has been made in theories, algorithms and applications of low-rank modeling, such as exact low-rank matrix recovery via convex programming and matrix completion applied to collaborative filtering. These advances have brought more and more attentions to this topic. In this paper, we review the recent advance of low-rank modeling, the state-of-the-art algorithms, and related applications in image analysis. We first give an overview to the concept of low-rank modeling and challenging problems in this area. Then, we summarize the models and algorithms for low-rank matrix recovery and illustrate their advantages and limitations with numerical experiments. Next, we introduce a few applications of low-rank modeling in the context of image analysis. Finally, we conclude this paper with some discussions.
Low-rank matrix completion is a problem of immense practical importance. Recent works on the subject often use nuclear norm as a convex surrogate of the rank function. Despite its solid theoretical foundation, the convex version of the problem often fails to work satisfactorily in real-life applications. Real data often suffer from very few observations, with support not meeting the random requirements, ubiquitous presence of noise and potentially gross corruptions, sometimes with these simultaneously occurring. This paper proposes a Proximal Alternating Robust Subspace Minimization (PARSuMi) method to tackle the three problems. The proximal alternating scheme explicitly exploits the rank constraint on the completed matrix and uses the $\ell_0$ pseudo-norm directly in the corruption recovery step. We show that the proposed method for the non-convex and non-smooth model converges to a stationary point. Although it is not guaranteed to find the global optimal solution, in practice we find that our algorithm can typically arrive at a good local minimizer when it is supplied with a reasonably good starting point based on convex optimization. Extensive experiments with challenging synthetic and real data demonstrate that our algorithm succeeds in a much larger range of practical problems where convex optimization fails, and it also outperforms various state-of-the-art algorithms.
Matrix completion is the problem of recovering a low rank matrix by observing a small fraction of its entries. A series of recent works [KOM12,JNS13,HW14] have proposed fast non-convex optimization based iterative algorithms to solve this problem. However, the sample complexity in all these results is sub-optimal in its dependence on the rank, condition number and the desired accuracy. In this paper, we present a fast iterative algorithm that solves the matrix completion problem by observing $O(nr^5 \log^3 n)$ entries, which is independent of the condition number and the desired accuracy. The run time of our algorithm is $O(nr^7\log^3 n\log 1/\epsilon)$ which is near linear in the dimension of the matrix. To the best of our knowledge, this is the first near linear time algorithm for exact matrix completion with finite sample complexity (i.e. independent of $\epsilon$). Our algorithm is based on a well known projected gradient descent method, where the projection is onto the (non-convex) set of low rank matrices. There are two key ideas in our result: 1) our argument is based on a $\ell_{\infty}$ norm potential function (as opposed to the spectral norm) and provides a novel way to obtain perturbation bounds for it. 2) we prove and use a natural extension of the Davis-Kahan theorem to obtain perturbation bounds on the best low rank approximation of matrices with good eigen-gap. Both of these ideas may be of independent interest.
CUR matrix decomposition computes the low rank approximation of a given matrix by using the actual rows and columns of the matrix. It has been a very useful tool for handling large matrices. One limitation with the existing algorithms for CUR matrix decomposition is that they need an access to the {\it full} matrix, a requirement that can be difficult to fulfill in many real world applications. In this work, we alleviate this limitation by developing a CUR decomposition algorithm for partially observed matrices. In particular, the proposed algorithm computes the low rank approximation of the target matrix based on (i) the randomly sampled rows and columns, and (ii) a subset of observed entries that are randomly sampled from the matrix. Our analysis shows the relative error bound, measured by spectral norm, for the proposed algorithm when the target matrix is of full rank. We also show that only $O(n r\ln r)$ observed entries are needed by the proposed algorithm to perfectly recover a rank $r$ matrix of size $n\times n$, which improves the sample complexity of the existing algorithms for matrix completion. Empirical studies on both synthetic and real-world datasets verify our theoretical claims and demonstrate the effectiveness of the proposed algorithm.
This paper examines a general class of noisy matrix completion tasks where the goal is to estimate a matrix from observations obtained at a subset of its entries, each of which is subject to random noise or corruption. Our specific focus is on settings where the matrix to be estimated is well-approximated by a product of two (a priori unknown) matrices, one of which is sparse. Such structural models - referred to here as "sparse factor models" - have been widely used, for example, in subspace clustering applications, as well as in contemporary sparse modeling and dictionary learning tasks. Our main theoretical contributions are estimation error bounds for sparsity-regularized maximum likelihood estimators for problems of this form, which are applicable to a number of different observation noise or corruption models. Several specific implications are examined, including scenarios where observations are corrupted by additive Gaussian noise or additive heavier-tailed (Laplace) noise, Poisson-distributed observations, and highly-quantized (e.g., one-bit) observations. We also propose a simple algorithmic approach based on the alternating direction method of multipliers for these tasks, and provide experimental evidence to support our error analyses.
The essence of distantly supervised relation extraction is that it is an incomplete multi-label classification problem with sparse and noisy features. To tackle the sparsity and noise challenges, we propose solving the classification problem using matrix completion on factorized matrix of minimized rank. We formulate relation classification as completing the unknown labels of testing items (entity pairs) in a sparse matrix that concatenates training and testing textual features with training labels. Our algorithmic framework is based on the assumption that the rank of item-by-feature and item-by-label joint matrix is low. We apply two optimization models to recover the underlying low-rank matrix leveraging the sparsity of feature-label matrix. The matrix completion problem is then solved by the fixed point continuation (FPC) algorithm, which can find the global optimum. Experiments on two widely used datasets with different dimensions of textual features demonstrate that our low-rank matrix completion approach significantly outperforms the baseline and the state-of-the-art methods.
In this paper, we consider the matrix completion problem when the observations are one-bit measurements of some underlying matrix M, and in particular the observed samples consist only of ones and no zeros. This problem is motivated by modern applications such as recommender systems and social networks where only "likes" or "friendships" are observed. The problem of learning from only positive and unlabeled examples, called PU (positive-unlabeled) learning, has been studied in the context of binary classification. We consider the PU matrix completion problem, where an underlying real-valued matrix M is first quantized to generate one-bit observations and then a subset of positive entries is revealed. Under the assumption that M has bounded nuclear norm, we provide recovery guarantees for two different observation models: 1) M parameterizes a distribution that generates a binary matrix, 2) M is thresholded to obtain a binary matrix. For the first case, we propose a "shifted matrix completion" method that recovers M using only a subset of indices corresponding to ones, while for the second case, we propose a "biased matrix completion" method that recovers the (thresholded) binary matrix. Both methods yield strong error bounds --- if M is n by n, the Frobenius error is bounded as O(1/((1-rho)n), where 1-rho denotes the fraction of ones observed. This implies a sample complexity of O(n\log n) ones to achieve a small error, when M is dense and n is large. We extend our methods and guarantees to the inductive matrix completion problem, where rows and columns of M have associated features. We provide efficient and scalable optimization procedures for both the methods and demonstrate the effectiveness of the proposed methods for link prediction (on real-world networks consisting of over 2 million nodes and 90 million links) and semi-supervised clustering tasks.
The problem of finding the missing values of a matrix given a few of its entries, called matrix completion, has gathered a lot of attention in the recent years. Although the problem under the standard low rank assumption is NP-hard, Cand\`es and Recht showed that it can be exactly relaxed if the number of observed entries is sufficiently large. In this work, we introduce a novel matrix completion model that makes use of proximity information about rows and columns by assuming they form communities. This assumption makes sense in several real-world problems like in recommender systems, where there are communities of people sharing preferences, while products form clusters that receive similar ratings. Our main goal is thus to find a low-rank solution that is structured by the proximities of rows and columns encoded by graphs. We borrow ideas from manifold learning to constrain our solution to be smooth on these graphs, in order to implicitly force row and column proximities. Our matrix recovery model is formulated as a convex non-smooth optimization problem, for which a well-posed iterative scheme is provided. We study and evaluate the proposed matrix completion on synthetic and real data, showing that the proposed structured low-rank recovery model outperforms the standard matrix completion model in many situations.
The task of reconstructing a matrix given a sample of observedentries is known as the matrix completion problem. It arises ina wide range of problems, including recommender systems, collaborativefiltering, dimensionality reduction, image processing, quantum physics or multi-class classificationto name a few. Most works have focused on recovering an unknown real-valued low-rankmatrix from randomly sub-sampling its entries.Here, we investigate the case where the observations take a finite number of values, corresponding for examples to ratings in recommender systems or labels in multi-class classification.We also consider a general sampling scheme (not necessarily uniform) over the matrix entries.The performance of a nuclear-norm penalized estimator is analyzed theoretically.More precisely, we derive bounds for the Kullback-Leibler divergence between the true and estimated distributions.In practice, we have also proposed an efficient algorithm based on lifted coordinate gradient descent in order to tacklepotentially high dimensional settings.
The recently proposed SPARse Factor Analysis (SPARFA) framework for personalized learning performs factor analysis on ordinal or binary-valued (e.g., correct/incorrect) graded learner responses to questions. The underlying factors are termed "concepts" (or knowledge components) and are used for learning analytics (LA), the estimation of learner concept-knowledge profiles, and for content analytics (CA), the estimation of question-concept associations and question difficulties. While SPARFA is a powerful tool for LA and CA, it requires a number of algorithm parameters (including the number of concepts), which are difficult to determine in practice. In this paper, we propose SPARFA-Lite, a convex optimization-based method for LA that builds on matrix completion, which only requires a single algorithm parameter and enables us to automatically identify the required number of concepts. Using a variety of educational datasets, we demonstrate that SPARFALite (i) achieves comparable performance in predicting unobserved learner responses to existing methods, including item response theory (IRT) and SPARFA, and (ii) is computationally more efficient.
In this paper, we consider the problem of finding dense intrinsic correspondence between manifolds using the recently introduced functional framework. We pose the functional correspondence problem as matrix completion with manifold geometric structure and inducing functional localization with the $L_1$ norm. We discuss efficient numerical procedures for the solution of our problem. Our method compares favorably to the accuracy of state-of-the-art correspondence algorithms on non-rigid shape matching benchmarks, and is especially advantageous in settings when only scarce data is available.
Matrix completion and approximation are popular tools to capture a user's preferences for recommendation and to approximate missing data. Instead of using low-rank factorization we take a drastically different approach, based on the simple insight that an additive model of co-clusterings allows one to approximate matrices efficiently. This allows us to build a concise model that, per bit of model learned, significantly beats all factorization approaches to matrix approximation. Even more surprisingly, we find that summing over small co-clusterings is more effective in modeling matrices than classic co-clustering, which uses just one large partitioning of the matrix. Following Occam's razor principle suggests that the simple structure induced by our model better captures the latent preferences and decision making processes present in the real world than classic co-clustering or matrix factorization. We provide an iterative minimization algorithm, a collapsed Gibbs sampler, theoretical guarantees for matrix approximation, and excellent empirical evidence for the efficacy of our approach. We achieve state-of-the-art results on the Netflix problem with a fraction of the model complexity.
We develop latent variable models for Bayesian learning based low-rank matrix completion and reconstruction from linear measurements. For under-determined systems, the developed methods are shown to reconstruct low-rank matrices when neither the rank nor the noise power is known a-priori. We derive relations between the latent variable models and several low-rank promoting penalty functions. The relations justify the use of Kronecker structured covariance matrices in a Gaussian based prior. In the methods, we use evidence approximation and expectation-maximization to learn the model parameters. The performance of the methods is evaluated through extensive numerical simulations.
We introduce a Prony-like method to recover a continuous domain 2-D piecewise smooth image from few of its Fourier samples. Assuming the discontinuity set of the image is localized to the zero level-set of a trigonometric polynomial, we show the Fourier transform coefficients of partial derivatives of the signal satisfy an annihilation relation. We present necessary and sufficient conditions for unique recovery of piecewise constant images using the above annihilation relation. We pose the recovery of the Fourier coefficients of the signal from the measurements as a convex matrix completion algorithm, which relies on the lifting of the Fourier data to a structured low-rank matrix; this approach jointly estimates the signal and the annihilating filter. Finally, we demonstrate our algorithm on the recovery of MRI phantoms from few low-resolution Fourier samples.
We provide a new robust convergence analysis of the well-known power method for computing the dominant singular vectors of a matrix that we call the noisy power method. Our result characterizes the convergence behavior of the algorithm when a significant amount noise is introduced after each matrix-vector multiplication. The noisy power method can be seen as a meta-algorithm that has recently found a number of important applications in a broad range of machine learning problems including alternating minimization for matrix completion, streaming principal component analysis (PCA), and privacy-preserving spectral analysis. Our general analysis subsumes several existing ad-hoc convergence bounds and resolves a number of open problems in multiple applications including streaming PCA and privacy-preserving singular vector computation.
Multiple hypothesis testing is a significant problem in nearly all neuroimaging studies. In order to correct for this phenomena, we require a reliable estimate of the Family-Wise Error Rate (FWER). The well known Bonferroni correction method, while simple to implement, is quite conservative, and can substantially under-power a study because it ignores dependencies between test statistics. Permutation testing, on the other hand, is an exact, non-parametric method of estimating the FWER for a given $\alpha$-threshold, but for acceptably low thresholds the computational burden can be prohibitive. In this paper, we show that permutation testing in fact amounts to populating the columns of a very large matrix ${\bf P}$. By analyzing the spectrum of this matrix, under certain conditions, we see that ${\bf P}$ has a low-rank plus a low-variance residual decomposition which makes it suitable for highly sub--sampled --- on the order of $0.5\%$ --- matrix completion methods. Based on this observation, we propose a novel permutation testing methodology which offers a large speedup, without sacrificing the fidelity of the estimated FWER. Our evaluations on four different neuroimaging datasets show that a computational speedup factor of roughly $50\times$ can be achieved while recovering the FWER distribution up to very high accuracy. Further, we show that the estimated $\alpha$-threshold is also recovered faithfully, and is stable.
Low-rank matrix completion is an important problem with extensive real-world applications. When observations are uniformly sampled from the underlying matrix entries, existing methods all require the matrix to be incoherent. This paper provides the first working method for coherent matrix completion under the standard uniform sampling model. Our approach is based on the weighted nuclear norm minimization idea proposed in several recent work, and our key contribution is a practical method to compute the weighting matrices so that the leverage scores become more uniform after weighting. Under suitable conditions, we are able to derive theoretical results, showing the effectiveness of our approach. Experiments on synthetic data show that our approach recovers highly coherent matrices with high precision, whereas the standard unweighted method fails even on noise-free data.
Stochastic gradient descent (SGD) on a low-rank factorization is commonly employed to speed up matrix problems including matrix completion, subspace tracking, and SDP relaxation. In this paper, we exhibit a step size scheme for SGD on a low-rank least-squares problem, and we prove that, under broad sampling conditions, our method converges globally from a random starting point within $O(\epsilon^{-1} n \log n)$ steps with constant probability for constant-rank problems. Our modification of SGD relates it to stochastic power iteration. We also show experiments to illustrate the runtime and convergence of the algorithm.
This paper considers the matrix completion problem. We show that it is not necessary to assume joint incoherence, which is a standard but unintuitive and restrictive condition that is imposed by previous studies. This leads to a sample complexity bound that is order-wise optimal with respect to the incoherence parameter (as well as to the rank $r$ and the matrix dimension $n$ up to a log factor). As a consequence, we improve the sample complexity of recovering a semidefinite matrix from $O(nr^{2}\log^{2}n)$ to $O(nr\log^{2}n)$, and the highest allowable rank from $\Theta(\sqrt{n}/\log n)$ to $\Theta(n/\log^{2}n)$. The key step in proof is to obtain new bounds on the $\ell_{\infty,2}$-norm, defined as the maximum of the row and column norms of a matrix. To illustrate the applicability of our techniques, we discuss extensions to SVD projection, structured matrix completion and semi-supervised clustering, for which we provide order-wise improvements over existing results. Finally, we turn to the closely-related problem of low-rank-plus-sparse matrix decomposition. We show that the joint incoherence condition is unavoidable here for polynomial-time algorithms conditioned on the Planted Clique conjecture. This means it is intractable in general to separate a rank-$\omega(\sqrt{n})$ positive semidefinite matrix and a sparse matrix. Interestingly, our results show that the standard and joint incoherence conditions are associated respectively with the information (statistical) and computational aspects of the matrix decomposition problem.
We consider the problem of noisy 1-bit matrix completion under an exact rank constraint on the true underlying matrix $M^*$. Instead of observing a subset of the noisy continuous-valued entries of a matrix $M^*$, we observe a subset of noisy 1-bit (or binary) measurements generated according to a probabilistic model. We consider constrained maximum likelihood estimation of $M^*$, under a constraint on the entry-wise infinity-norm of $M^*$ and an exact rank constraint. This is in contrast to previous work which has used convex relaxations for the rank. We provide an upper bound on the matrix estimation error under this model. Compared to the existing results, our bound has faster convergence rate with matrix dimensions when the fraction of revealed 1-bit observations is fixed, independent of the matrix dimensions. We also propose an iterative algorithm for solving our nonconvex optimization with a certificate of global optimality of the limiting point. This algorithm is based on low rank factorization of $M^*$. We validate the method on synthetic and real data with improved performance over existing methods.