Crop yield estimation is a relevant problem in agriculture, because an accurate yield estimate can support farmers' decisions on harvesting or precision intervention. Robots can help to automate this process. To do so, they need to be able to perceive the surrounding environment to identify target objects such as trees and plants. In this paper, we introduce a novel approach to address the problem of hierarchical panoptic segmentation of apple orchards on 3D data from different sensors. Our approach is able to simultaneously provide semantic segmentation, instance segmentation of trunks and fruits, and instance segmentation of trees (a trunk with its fruits). This allows us to identify relevant information such as individual plants, fruits, and trunks, and capture the relationship among them, such as precisely estimate the number of fruits associated to each tree in an orchard. To efficiently evaluate our approach for hierarchical panoptic segmentation, we provide a dataset designed specifically for this task. Our dataset is recorded in Bonn, Germany, in a real apple orchard with a variety of sensors, spanning from a terrestrial laser scanner to a RGB-D camera mounted on different robots platforms. The experiments show that our approach surpasses state-of-the-art approaches in 3D panoptic segmentation in the agricultural domain, while also providing full hierarchical panoptic segmentation. Our dataset is publicly available at https://www.ipb.uni-bonn.de/data/hops/. The open-source implementation of our approach is available at https://github.com/PRBonn/hapt3D.
3D semantic segmentation plays a fundamental and crucial role to understand 3D scenes. While contemporary state-of-the-art techniques predominantly concentrate on elevating the overall performance of 3D semantic segmentation based on general metrics (e.g. mIoU, mAcc, and oAcc), they unfortunately leave the exploration of challenging regions for segmentation mostly neglected. In this paper, we revisit 3D semantic segmentation through a more granular lens, shedding light on subtle complexities that are typically overshadowed by broader performance metrics. Concretely, we have delineated 3D semantic segmentation errors into four comprehensive categories as well as corresponding evaluation metrics tailored to each. Building upon this categorical framework, we introduce an innovative 3D semantic segmentation network called BFANet that incorporates detailed analysis of semantic boundary features. First, we design the boundary-semantic module to decouple point cloud features into semantic and boundary features, and fuse their query queue to enhance semantic features with attention. Second, we introduce a more concise and accelerated boundary pseudo-label calculation algorithm, which is 3.9 times faster than the state-of-the-art, offering compatibility with data augmentation and enabling efficient computation in training. Extensive experiments on benchmark data indicate the superiority of our BFANet model, confirming the significance of emphasizing the four uniquely designed metrics. Code is available at https://github.com/weiguangzhao/BFANet.
Camouflaged object detection (COD) aims to generate a fine-grained segmentation map of camouflaged objects hidden in their background. Due to the hidden nature of camouflaged objects, it is essential for the decoder to be tailored to effectively extract proper features of camouflaged objects and extra-carefully generate their complex boundaries. In this paper, we propose a novel architecture that augments the prevalent decoding strategy in COD with Enrich Decoder and Retouch Decoder, which help to generate a fine-grained segmentation map. Specifically, the Enrich Decoder amplifies the channels of features that are important for COD using channel-wise attention. Retouch Decoder further refines the segmentation maps by spatially attending to important pixels, such as the boundary regions. With extensive experiments, we demonstrate that ENTO shows superior performance using various encoders, with the two novel components playing their unique roles that are mutually complementary.
Egocentric scenes exhibit frequent occlusions, varied viewpoints, and dynamic interactions compared to typical scene understanding tasks. Occlusions and varied viewpoints can lead to multi-view semantic inconsistencies, while dynamic objects may act as transient distractors, introducing artifacts into semantic feature modeling. To address these challenges, we propose EgoSplat, a language-embedded 3D Gaussian Splatting framework for open-vocabulary egocentric scene understanding. A multi-view consistent instance feature aggregation method is designed to leverage the segmentation and tracking capabilities of SAM2 to selectively aggregate complementary features across views for each instance, ensuring precise semantic representation of scenes. Additionally, an instance-aware spatial-temporal transient prediction module is constructed to improve spatial integrity and temporal continuity in predictions by incorporating spatial-temporal associations across multi-view instances, effectively reducing artifacts in the semantic reconstruction of egocentric scenes. EgoSplat achieves state-of-the-art performance in both localization and segmentation tasks on two datasets, outperforming existing methods with a 8.2% improvement in localization accuracy and a 3.7% improvement in segmentation mIoU on the ADT dataset, and setting a new benchmark in open-vocabulary egocentric scene understanding. The code will be made publicly available.
In recent years, numerous neural network architectures specifically designed for the instance segmentation of nuclei in microscopic images have been released. These models embed nuclei-specific priors to outperform generic architectures like U-Nets; however, they require large annotated datasets, which are often not available. Generative models (GANs, diffusion models) have been used to compensate for this by synthesizing training data. These two-stage approaches are computationally expensive, as first a generative model and then a segmentation model has to be trained. We propose CyclePose, a hybrid framework integrating synthetic data generation and segmentation training. CyclePose builds on a CycleGAN architecture, which allows unpaired translation between microscopy images and segmentation masks. We embed a segmentation model into CycleGAN and leverage a cycle consistency loss for self-supervision. Without annotated data, CyclePose outperforms other weakly or unsupervised methods on two public datasets. Code is available at https://github.com/jonasutz/CyclePose
Semantic segmentation is a key technique that enables mobile robots to understand and navigate surrounding environments autonomously. However, most existing works focus on segmenting known objects, overlooking the identification of unknown classes, which is common in real-world applications. In this paper, we propose a feature-oriented framework for open-set semantic segmentation on LiDAR data, capable of identifying unknown objects while retaining the ability to classify known ones. We design a decomposed dual-decoder network to simultaneously perform closed-set semantic segmentation and generate distinctive features for unknown objects. The network is trained with multi-objective loss functions to capture the characteristics of known and unknown objects. Using the extracted features, we introduce an anomaly detection mechanism to identify unknown objects. By integrating the results of close-set semantic segmentation and anomaly detection, we achieve effective feature-driven LiDAR open-set semantic segmentation. Evaluations on both SemanticKITTI and nuScenes datasets demonstrate that our proposed framework significantly outperforms state-of-the-art methods. The source code will be made publicly available at https://github.com/nubot-nudt/DOSS.
Large-scale vision-language models (VLMs), trained on extensive datasets of image-text pairs, exhibit strong multimodal understanding capabilities by implicitly learning associations between textual descriptions and image regions. This emergent ability enables zero-shot object detection and segmentation, using techniques that rely on text-image attention maps, without necessarily training on abundant labeled segmentation datasets. However, performance of such methods depends heavily on prompt engineering and manually selected layers or head choices for the attention layers. In this work, we demonstrate that, rather than relying solely on textual prompts, providing a single visual example for each category and fine-tuning the text-to-image attention layers and embeddings significantly improves the performance. Additionally, we propose learning an ensemble through few-shot fine-tuning across multiple layers and/or prompts. An entropy-based ranking and selection mechanism for text-to-image attention layers is proposed to identify the top-performing layers without the need for segmentation labels. This eliminates the need for hyper-parameter selection of text-to-image attention layers, providing a more flexible and scalable solution for open-vocabulary segmentation. We show that this approach yields strong zero-shot performance, further enhanced through fine-tuning with a single visual example. Moreover, we demonstrate that our method and findings are general and can be applied across various vision-language models (VLMs).
With the continuous advancement of human exploration into deep space, intelligent perception and high-precision segmentation technology for on-orbit multi-spacecraft targets have become critical factors for ensuring the success of modern space missions. However, the complex deep space environment, diverse imaging conditions, and high variability in spacecraft morphology pose significant challenges to traditional segmentation methods. This paper proposes SpaceSeg, an innovative vision foundation model-based segmentation framework with four core technical innovations: First, the Multi-Scale Hierarchical Attention Refinement Decoder (MSHARD) achieves high-precision feature decoding through cross-resolution feature fusion via hierarchical attention. Second, the Multi-spacecraft Connected Component Analysis (MS-CCA) effectively resolves topological structure confusion in dense targets. Third, the Spatial Domain Adaptation Transform framework (SDAT) eliminates cross-domain disparities and resist spatial sensor perturbations through composite enhancement strategies. Finally, a custom Multi-Spacecraft Segmentation Task Loss Function is created to significantly improve segmentation robustness in deep space scenarios. To support algorithm validation, we construct the first multi-scale on-orbit multi-spacecraft semantic segmentation dataset SpaceES, which covers four types of spatial backgrounds and 17 typical spacecraft targets. In testing, SpaceSeg achieves state-of-the-art performance with 89.87$\%$ mIoU and 99.98$\%$ mAcc, surpassing existing best methods by 5.71 percentage points. The dataset and code are open-sourced at https://github.com/Akibaru/SpaceSeg to provide critical technical support for next-generation space situational awareness systems.
Semi-Supervised Semantic Segmentation reduces reliance on extensive annotations by using unlabeled data and state-of-the-art models to improve overall performance. Despite the success of deep co-training methods, their underlying mechanisms remain underexplored. This work revisits Cross Pseudo Supervision with dual heterogeneous backbones and introduces Knowledge Consultation (SegKC) to further enhance segmentation performance. The proposed SegKC achieves significant improvements on Pascal and Cityscapes benchmarks, with mIoU scores of 87.1%, 89.2%, and 89.8% on Pascal VOC with the 1/4, 1/2, and full split partition, respectively, while maintaining a compact model architecture.
Low-resolution image segmentation is crucial in real-world applications such as robotics, augmented reality, and large-scale scene understanding, where high-resolution data is often unavailable due to computational constraints. To address this challenge, we propose MaskAttn-UNet, a novel segmentation framework that enhances the traditional U-Net architecture via a mask attention mechanism. Our model selectively emphasizes important regions while suppressing irrelevant backgrounds, thereby improving segmentation accuracy in cluttered and complex scenes. Unlike conventional U-Net variants, MaskAttn-UNet effectively balances local feature extraction with broader contextual awareness, making it particularly well-suited for low-resolution inputs. We evaluate our approach on three benchmark datasets with input images rescaled to 128x128 and demonstrate competitive performance across semantic, instance, and panoptic segmentation tasks. Our results show that MaskAttn-UNet achieves accuracy comparable to state-of-the-art methods at significantly lower computational cost than transformer-based models, making it an efficient and scalable solution for low-resolution segmentation in resource-constrained scenarios.
As lunar exploration missions grow increasingly complex, ensuring safe and autonomous rover-based surface exploration has become one of the key challenges in lunar exploration tasks. In this work, we have developed a lunar surface simulation system called the Lunar Exploration Simulator System (LESS) and the LunarSeg dataset, which provides RGB-D data for lunar obstacle segmentation that includes both positive and negative obstacles. Additionally, we propose a novel two-stage segmentation network called LuSeg. Through contrastive learning, it enforces semantic consistency between the RGB encoder from Stage I and the depth encoder from Stage II. Experimental results on our proposed LunarSeg dataset and additional public real-world NPO road obstacle dataset demonstrate that LuSeg achieves state-of-the-art segmentation performance for both positive and negative obstacles while maintaining a high inference speed of approximately 57\,Hz. We have released the implementation of our LESS system, LunarSeg dataset, and the code of LuSeg at:https://github.com/nubot-nudt/LuSeg.
Referring remote sensing image segmentation (RRSIS) is a novel visual task in remote sensing images segmentation, which aims to segment objects based on a given text description, with great significance in practical application. Previous studies fuse visual and linguistic modalities by explicit feature interaction, which fail to effectively excavate useful multimodal information from dual-branch encoder. In this letter, we design a multimodal-aware fusion network (MAFN) to achieve fine-grained alignment and fusion between the two modalities. We propose a correlation fusion module (CFM) to enhance multi-scale visual features by introducing adaptively noise in transformer, and integrate cross-modal aware features. In addition, MAFN employs multi-scale refinement convolution (MSRC) to adapt to the various orientations of objects at different scales to boost their representation ability to enhances segmentation accuracy. Extensive experiments have shown that MAFN is significantly more effective than the state of the art on RRSIS-D datasets. The source code is available at https://github.com/Roaxy/MAFN.
Background: Automated analysis of CT scans for abdominal organ measurement is crucial for improving diagnostic efficiency and reducing inter-observer variability. Manual segmentation and measurement of organs such as the kidneys, liver, spleen, and prostate are time-consuming and subject to inconsistency, underscoring the need for automated approaches. Purpose: The purpose of this study is to develop and validate an automated workflow for the segmentation and measurement of abdominal organs in CT scans using advanced deep learning models, in order to improve accuracy, reliability, and efficiency in clinical evaluations. Methods: The proposed workflow combines nnU-Net, U-Net++ for organ segmentation, followed by a 3D RCNN model for measuring organ volumes and dimensions. The models were trained and evaluated on CT datasets with metrics such as precision, recall, and Mean Squared Error (MSE) to assess performance. Segmentation quality was verified for its adaptability to variations in patient anatomy and scanner settings. Results: The developed workflow achieved high precision and recall values, exceeding 95 for all targeted organs. The Mean Squared Error (MSE) values were low, indicating a high level of consistency between predicted and ground truth measurements. The segmentation and measurement pipeline demonstrated robust performance, providing accurate delineation and quantification of the kidneys, liver, spleen, and prostate. Conclusion: The proposed approach offers an automated, efficient, and reliable solution for abdominal organ measurement in CT scans. By significantly reducing manual intervention, this workflow enhances measurement accuracy and consistency, with potential for widespread clinical implementation. Future work will focus on expanding the approach to other organs and addressing complex pathological cases.
An important step in understanding how children acquire languages is studying how infants learn word segmentation. It has been established in previous research that infants may use statistical regularities in speech to learn word segmentation. The research of Goldwater et al., demonstrated that incorporating context in models improves their ability to learn word segmentation. We implemented two of their models, a unigram and bigram model, to examine how context can improve statistical word segmentation. The results are consistent with our hypothesis that the bigram model outperforms the unigram model at predicting word segmentation. Extending the work of Goldwater et al., we also explored basic ways to model how young children might use previously learned words to segment new utterances.
Nuclei segmentation and classification provide an essential basis for tumor immune microenvironment analysis. The previous nuclei segmentation and classification models require splitting large images into smaller patches for training, leading to two significant issues. First, nuclei at the borders of adjacent patches often misalign during inference. Second, this patch-based approach significantly increases the model's training and inference time. Recently, Mamba has garnered attention for its ability to model large-scale images with linear time complexity and low memory consumption. It offers a promising solution for training nuclei segmentation and classification models on full-sized images. However, the Mamba orientation-based scanning method lacks account for category-specific features, resulting in sub-optimal performance in scenarios with imbalanced class distributions. To address these challenges, this paper introduces a novel scanning strategy based on category probability sorting, which independently ranks and scans features for each category according to confidence from high to low. This approach enhances the feature representation of uncertain samples and mitigates the issues caused by imbalanced distributions. Extensive experiments conducted on four public datasets demonstrate that our method outperforms state-of-the-art approaches, delivering superior performance in nuclei segmentation and classification tasks.
Analyzing animal behavior from video recordings is crucial for scientific research, yet manual annotation remains labor-intensive and prone to subjectivity. Efficient segmentation methods are needed to automate this process while maintaining high accuracy. In this work, we propose a novel pipeline that utilizes eye-tracking data from Aria glasses to generate prompt points, which are then used to produce segmentation masks via a fast zero-shot segmentation model. Additionally, we apply post-processing to refine the prompts, leading to improved segmentation quality. Through our approach, we demonstrate that combining eye-tracking-based annotation with smart prompt refinement can enhance segmentation accuracy, achieving an improvement of 70.6% from 38.8 to 66.2 in the Jaccard Index for segmentation results in the rats dataset.
Amodal segmentation aims to infer the complete shape of occluded objects, even when the occluded region's appearance is unavailable. However, current amodal segmentation methods lack the capability to interact with users through text input and struggle to understand or reason about implicit and complex purposes. While methods like LISA integrate multi-modal large language models (LLMs) with segmentation for reasoning tasks, they are limited to predicting only visible object regions and face challenges in handling complex occlusion scenarios. To address these limitations, we propose a novel task named amodal reasoning segmentation, aiming to predict the complete amodal shape of occluded objects while providing answers with elaborations based on user text input. We develop a generalizable dataset generation pipeline and introduce a new dataset focusing on daily life scenarios, encompassing diverse real-world occlusions. Furthermore, we present AURA (Amodal Understanding and Reasoning Assistant), a novel model with advanced global and spatial-level designs specifically tailored to handle complex occlusions. Extensive experiments validate AURA's effectiveness on the proposed dataset. The code, model, and dataset will be publicly released.
Estimation of a single leaf area can be a measure of crop growth and a phenotypic trait to breed new varieties. It has also been used to measure leaf area index and total leaf area. Some studies have used hand-held cameras, image processing 3D reconstruction and unsupervised learning-based methods to estimate the leaf area in plant images. Deep learning works well for object detection and segmentation tasks; however, direct area estimation of objects has not been explored. This work investigates deep learning-based leaf area estimation, for RGBD images taken using a mobile camera setup in real-world scenarios. A dataset for attached leaves captured with a top angle view and a dataset for detached single leaves were collected for model development and testing. First, image processing-based area estimation was tested on manually segmented leaves. Then a Mask R-CNN-based model was investigated, and modified to accept RGBD images and to estimate the leaf area. The detached-leaf data set was then mixed with the attached-leaf plant data set to estimate the single leaf area for plant images, and another network design with two backbones was proposed: one for segmentation and the other for area estimation. Instead of trying all possibilities or random values, an agile approach was used in hyperparameter tuning. The final model was cross-validated with 5-folds and tested with two unseen datasets: detached and attached leaves. The F1 score with 90% IoA for segmentation result on unseen detached-leaf data was 1.0, while R-squared of area estimation was 0.81. For unseen plant data segmentation, the F1 score with 90% IoA was 0.59, while the R-squared score was 0.57. The research suggests using attached leaves with ground truth area to improve the results.
Developing robust and versatile deep-learning models is essential for enhancing diagnostic accuracy and guiding clinical interventions in medical imaging, but it requires a large amount of annotated data. The advancement of deep learning has facilitated the creation of numerous medical datasets with diverse expert-level annotations. Aggregating these datasets can maximize data utilization and address the inadequacy of labeled data. However, the heterogeneity of expert-level annotations across tasks such as classification, localization, and segmentation presents a significant challenge for learning from these datasets. To this end, we introduce nFoundation X, an end-to-end framework that utilizes diverse expert-level annotations from numerous public datasets to train a foundation model capable of multiple tasks including classification, localization, and segmentation. To address the challenges of annotation and task heterogeneity, we propose a Lock-Release pretraining strategy to enhance the cyclic learning from multiple datasets, combined with the student-teacher learning paradigm, ensuring the model retains general knowledge for all tasks while preventing overfitting to any single task. To demonstrate the effectiveness of Foundation X, we trained a model using 11 chest X-ray datasets, covering annotations for classification, localization, and segmentation tasks. Our experimental results show that Foundation X achieves notable performance gains through extensive annotation utilization, excels in cross-dataset and cross-task learning, and further enhances performance in organ localization and segmentation tasks. All code and pretrained models are publicly accessible at https://github.com/jlianglab/Foundation_X.
Accurate and reliable tumor segmentation is essential in medical imaging analysis for improving diagnosis, treatment planning, and monitoring. However, existing segmentation models often lack robust mechanisms for quantifying the uncertainty associated with their predictions, which is essential for informed clinical decision-making. This study presents a novel approach for uncertainty quantification in kidney tumor segmentation using deep learning, specifically leveraging multiple local minima during training. Our method generates uncertainty maps without modifying the original model architecture or requiring extensive computational resources. We evaluated our approach on the KiTS23 dataset, where our approach effectively identified ambiguous regions faster and with lower uncertainty scores in contrast to previous approaches. The generated uncertainty maps provide critical insights into model confidence, ultimately enhancing the reliability of the segmentation with the potential to support more accurate medical diagnoses. The computational efficiency and model-agnostic design of the proposed approach allows adaptation without architectural changes, enabling use across various segmentation models.