Skin disease classification from images is crucial to dermatological diagnosis. However, identifying skin lesions involves a variety of aspects in terms of size, color, shape, and texture. To make matters worse, many categories only contain very few samples, posing great challenges to conventional machine learning algorithms and even human experts. Inspired by the recent success of Few-Shot Learning (FSL) in natural image classification, we propose to apply FSL to skin disease identification to address the extreme scarcity of training sample problem. However, directly applying FSL to this task does not work well in practice, and we find that the problem can be largely attributed to the incompatibility between Cross Entropy (CE) and episode training, which are both commonly used in FSL. Based on a detailed analysis, we propose the Query-Relative (QR) loss, which proves superior to CE under episode training and is closely related to recently proposed mutual information estimation. Moreover, we further strengthen the proposed QR loss with a novel adaptive hard margin strategy. Comprehensive experiments validate the effectiveness of the proposed FSL scheme and the possibility to diagnosis rare skin disease with a few labeled samples.
Autism spectrum disorder (ASD) is associated with behavioral and communication problems. Often, functional magnetic resonance imaging (fMRI) is used to detect and characterize brain changes related to the disorder. Recently, machine learning methods have been employed to reveal new patterns by trying to classify ASD from spatio-temporal fMRI images. Typically, these methods have either focused on temporal or spatial information processing. Instead, we propose a 4D spatio-temporal deep learning approach for ASD classification where we jointly learn from spatial and temporal data. We employ 4D convolutional neural networks and convolutional-recurrent models which outperform a previous approach with an F1-score of 0.71 compared to an F1-score of 0.65.
Classification of new class entities requires collecting and annotating hundreds or thousands of samples that is often prohibitively costly. Few-shot learning suggests learning to classify new classes using just a few examples. Only a small number of studies address the challenge of few-shot learning on spatio-temporal patterns such as videos. In this paper, we present the Temporal Aware Embedding Network (TAEN) for few-shot action recognition, that learns to represent actions, in a metric space as a trajectory, conveying both short term semantics and longer term connectivity between action parts. We demonstrate the effectiveness of TAEN on two few shot tasks, video classification and temporal action detection and evaluate our method on the Kinetics-400 and on ActivityNet 1.2 few-shot benchmarks. With training of just a few fully connected layers we reach comparable results to prior art on both few shot video classification and temporal detection tasks, while reaching state-of-the-art in certain scenarios.
Recent years, typhoon damages has become social problem owing to climate change. In 9 September 2019, Typhoon Faxai passed on the Chiba in Japan, whose damages included with electric provision stop because of strong wind recorded on the maximum 45 meter per second. A large amount of tree fell down, and the neighbor electric poles also fell down at the same time. These disaster features have caused that it took 18 days for recovery longer than past ones. Immediate responses are important for faster recovery. As long as we can, aerial survey for global screening of devastated region would be required for decision support to respond where to recover ahead. This paper proposes a practical method to visualize the damaged areas focused on the typhoon disaster features using aerial photography. This method can classify eight classes which contains land covers without damages and areas with disaster. Using target feature class probabilities, we can visualize disaster feature map to scale a color range. Furthermore, we can realize explainable map on each unit grid images to compute the convolutional activation map using Grad-CAM. We demonstrate case studies applied to aerial photographs recorded at the Chiba region after typhoon.
With the increasing adoption of machine learning tools like neural networks across several domains, interesting connections and comparisons to concepts from other domains are coming to light. In this work, we focus on the class of Tensor Networks, which has been a work horse for physicists in the last two decades to analyse quantum many-body systems. Building on the recent interest in tensor networks for machine learning, we extend the Matrix Product State tensor networks (which can be interpreted as linear classifiers operating in exponentially high dimensional spaces) to be useful in medical image analysis tasks. We focus on classification problems as a first step where we motivate the use of tensor networks and propose adaptions for 2D images using classical image domain concepts such as local orderlessness of images. With the proposed locally orderless tensor network model (LoTeNet), we show that tensor networks are capable of attaining performance that is comparable to state-of-the-art deep learning methods. We evaluate the model on two publicly available medical imaging datasets and show performance improvements with fewer model hyperparameters and lesser computational resources compared to relevant baseline methods.
Recently, state-of-the-art NLP models gained an increasing syntactic and semantic understanding of language, and explanation methods are crucial to understand their decisions. Occlusion is a well established method that provides explanations on discrete language data, e.g. by removing a language unit from an input and measuring the impact on a model's decision. We argue that current occlusion-based methods often produce invalid or syntactically incorrect language data, neglecting the improved abilities of recent NLP models. Furthermore, gradient-based explanation methods disregard the discrete distribution of data in NLP. Thus, we propose OLM: a novel explanation method that combines occlusion and language models to sample valid and syntactically correct replacements with high likelihood, given the context of the original input. We lay out a theoretical foundation that alleviates these weaknesses of other explanation methods in NLP and provide results that underline the importance of considering data likelihood in occlusion-based explanation.
In recent years, feature selection has become a challenging problem in several machine learning fields, such as classification problems. Support Vector Machine (SVM) is a well-known technique applied in classification tasks. Various methodologies have been proposed in the literature to select the most relevant features in SVM. Unfortunately, all of them either deal with the feature selection problem in the linear classification setting or propose ad-hoc approaches that are difficult to implement in practice. In contrast, we propose an embedded feature selection method based on a min-max optimization problem, where a trade-off between model complexity and classification accuracy is sought. By leveraging duality theory, we equivalently reformulate the min-max problem and solve it without further ado using off-the-shelf software for nonlinear optimization. The efficiency and usefulness of our approach are tested on several benchmark data sets in terms of accuracy, number of selected features and interpretability.
Deep-learning architectures for classification problems involve the cross-entropy loss sometimes assisted with auxiliary loss functions like center loss, contrastive loss and triplet loss. These auxiliary loss functions facilitate better discrimination between the different classes of interest. However, recent studies hint at the fact that these loss functions do not take into account the intrinsic angular distribution exhibited by the low-level and high-level feature representations. This results in less compactness between samples from the same class and unclear boundary separations between data clusters of different classes. In this paper, we address this issue by proposing the use of geometric constraints, rooted in Riemannian geometry. Specifically, we propose Angular Margin Contrastive Loss (AMC-Loss), a new loss function to be used along with the traditional cross-entropy loss. The AMC-Loss employs the discriminative angular distance metric that is equivalent to geodesic distance on a hypersphere manifold such that it can serve a clear geometric interpretation. We demonstrate the effectiveness of AMC-Loss by providing quantitative and qualitative results. We find that although the proposed geometrically constrained loss-function improves quantitative results modestly, it has a qualitatively surprisingly beneficial effect on increasing the interpretability of deep-net decisions as seen by the visual explanations generated by techniques such as the Grad-CAM. Our code is available at https://github.com/hchoi71/AMC-Loss.
In this paper we propose novel methodologies to construct Support Vector Machine -based classifiers that takes into account that label noises occur in the training sample. We propose different alternatives based on solving Mixed Integer Linear and Non Linear models by incorporating decisions on relabeling some of the observations in the training dataset. The first method incorporates relabeling directly in the SVM model while a second family of methods combines clustering with classification at the same time, giving rise to a model that applies simultaneously similarity measures and SVM. Extensive computational experiments are reported based on a battery of standard datasets taken from UCI Machine Learning repository, showing the effectiveness of the proposed approaches.
The severity of knee osteoarthritis is graded using the 5-point Kellgren-Lawrence (KL) scale where healthy knees are assigned grade 0, and the subsequent grades 1-4 represent increasing severity of the affliction. Although several methods have been proposed in recent years to develop models that can automatically predict the KL grade from a given radiograph, most models have been developed and evaluated on datasets not sourced from India. These models fail to perform well on the radiographs of Indian patients. In this paper, we propose a novel method using convolutional neural networks to automatically grade knee radiographs on the KL scale. Our method works in two connected stages: in the first stage, an object detection model segments individual knees from the rest of the image; in the second stage, a regression model automatically grades each knee separately on the KL scale. We train our model using the publicly available Osteoarthritis Initiative (OAI) dataset and demonstrate that fine-tuning the model before evaluating it on a dataset from a private hospital significantly improves the mean absolute error from 1.09 (95% CI: 1.03-1.15) to 0.28 (95% CI: 0.25-0.32). Additionally, we compare classification and regression models built for the same task and demonstrate that regression outperforms classification.
Measurements in Liquid Argon Time Projection Chamber (LArTPC) neutrino detectors, such as the MicroBooNE detector at Fermilab, feature large, high fidelity event images. Deep learning techniques have been extremely successful in classification tasks of photographs, but their application to LArTPC event images is challenging, due to the large size of the events. Events in these detectors are typically two orders of magnitude larger than images found in classical challenges, like recognition of handwritten digits contained in the MNIST database or object recognition in the ImageNet database. Ideally, training would occur on many instances of the entire event data, instead of many instances of cropped regions of interest from the event data. However, such efforts lead to extremely long training cycles, which slow down the exploration of new network architectures and hyperparameter scans to improve the classification performance. We present studies of scaling a LArTPC classification problem on multiple architectures, spanning multiple nodes. The studies are carried out on simulated events in the MicroBooNE detector. We emphasize that it is beyond the scope of this study to optimize networks or extract the physics from any results here. Institutional computing at Pacific Northwest National Laboratory and the SummitDev machine at Oak Ridge National Laboratory's Leadership Computing Facility have been used. To our knowledge, this is the first use of state-of-the-art Convolutional Neural Networks for particle physics and their attendant compute techniques onto the DOE Leadership Class Facilities. We expect benefits to accrue particularly to the Deep Underground Neutrino Experiment (DUNE) LArTPC program, the flagship US High Energy Physics (HEP) program for the coming decades.
We propose a series of metrics between pairs of signals, linear systems or rational spectra, based on optimal transport and linear-systems theory. The metrics operate on the locations of the poles of rational functions and admit very efficient computation of distances, barycenters, displacement interpolation and projections. We establish the connection to the Wasserstein distance between rational spectra, and demonstrate the use of the metrics in tasks such as signal classification, clustering, detection and approximation.
Airborne light detection and ranging (LiDAR) plays an increasingly significant role in urban planning, topographic mapping, environmental monitoring, power line detection and other fields thanks to its capability to quickly acquire large-scale and high-precision ground information. To achieve point cloud classification, previous studies proposed point cloud deep learning models that can directly process raw point clouds based on PointNet-like architectures. And some recent works proposed graph convolution neural network based on the inherent topology of point clouds. However, the above point cloud deep learning models only pay attention to exploring local geometric structures, yet ignore global contextual relationships among all points. In this paper, we present a graph attention convolution neural network (GACNN) that can be directly applied to the classification of unstructured 3D point clouds obtained by airborne LiDAR. Specifically, we first introduce a graph attention convolution module that incorporates global contextual information and local structural features. Based on the proposed graph attention convolution module, we further design an end-to-end encoder-decoder network, named GACNN, to capture multiscale features of the point clouds and therefore enable more accurate airborne point cloud classification. Experiments on the ISPRS 3D labeling dataset show that the proposed model achieves a new state-of-the-art performance in terms of average F1 score (71.5\%) and a satisfying overall accuracy (83.2\%). Additionally, experiments further conducted on the 2019 Data Fusion Contest Dataset by comparing with other prevalent point cloud deep learning models demonstrate the favorable generalization capability of the proposed model.
A deep neural network of multiple nonlinear layers forms a large function space, which can easily lead to overfitting when it encounters small-sample data. To mitigate overfitting in small-sample classification, learning more discriminative features from small-sample data is becoming a new trend. To this end, this paper aims to find a subspace of neural networks that can facilitate a large decision margin. Specifically, we propose the Orthogonal Softmax Layer (OSL), which makes the weight vectors in the classification layer remain orthogonal during both the training and test processes. The Rademacher complexity of a network using the OSL is only $\frac{1}{K}$, where $K$ is the number of classes, of that of a network using the fully connected classification layer, leading to a tighter generalization error bound. Experimental results demonstrate that the proposed OSL has better performance than the methods used for comparison on four small-sample benchmark datasets, as well as its applicability to large-sample datasets. Codes are available at: https://github.com/dongliangchang/OSLNet.
Recurrent Neural Networks (RNN) are widely used for learning sequences in applications such as EEG classification. Complex RNNs could be hardly deployed on wearable devices due to their computation and memory-intensive processing patterns. Generally, reduction in precision leads much more efficiency and binarized RNNs are introduced as energy-efficient solutions. However, naive binarization methods lead to significant accuracy loss in EEG classification. In this paper, we propose a multi-level binarized LSTM, which significantly reduces computations whereas ensuring an accuracy pretty close to the full precision LSTM. Our method reduces the delay of the 3-bit LSTM cell operation 47* with less than 0.01% accuracy loss.
Spectral-spatial based deep learning models have recently proven to be effective in hyperspectral image (HSI) classification for various earth monitoring applications such as land cover classification and agricultural monitoring. However, due to the nature of "black-box" model representation, how to explain and interpret the learning process and the model decision, especially for vegetation classification, remains an open challenge. This study proposes a novel interpretable deep learning model -- a biologically interpretable two-stage deep neural network (BIT-DNN), by incorporating the prior-knowledge (i.e. biophysical and biochemical attributes and their hierarchical structures of target entities) based spectral-spatial feature transformation into the proposed framework, capable of achieving both high accuracy and interpretability on HSI based classification tasks. The proposed model introduces a two-stage feature learning process: in the first stage, an enhanced interpretable feature block extracts the low-level spectral features associated with the biophysical and biochemical attributes of target entities; and in the second stage, an interpretable capsule block extracts and encapsulates the high-level joint spectral-spatial features representing the hierarchical structure of biophysical and biochemical attributes of these target entities, which provides the model an improved performance on classification and intrinsic interpretability with reduced computational complexity. We have tested and evaluated the model using four real HSI datasets for four separate tasks (i.e. plant species classification, land cover classification, urban scene recognition, and crop disease recognition tasks). The proposed model has been compared with five state-of-the-art deep learning models.
Causal modeling has been recognized as a potential solution to many challenging problems in machine learning (ML). Here, we describe how a recently proposed counterfactual approach developed to deconfound linear structural causal models can still be used to deconfound the feature representations learned by deep neural network (DNN) models. The key insight is that by training an accurate DNN using softmax activation at the classification layer, and then adopting the representation learned by the last layer prior to the output layer as our features, we have that, by construction, the learned features will fit well a (multi-class) logistic regression model, and will be linearly associated with the labels. As a consequence, deconfounding approaches based on simple linear models can be used to deconfound the feature representations learned by DNNs. We validate the proposed methodology using colored versions of the MNIST dataset. Our results illustrate how the approach can effectively combat confounding and improve model stability in the context of dataset shifts generated by selection biases.
We present a convolutional neural network for the classification of correlation responses obtained by correlation filters. The proposed approach can improve the accuracy of classification, as well as achieve invariance to the image classes and parameters.
Most existing unsupervised domain adaptation methods mainly focused on aligning the marginal distributions of samples between the source and target domains. This setting does not sufficiently consider the class distribution information between the two domains, which could adversely affect the reduction of domain gap. To address this issue, we propose a novel approach called Conditional ADversarial Image Translation (CADIT) to explicitly align the class distributions given samples between the two domains. It integrates a discriminative structure-preserving loss and a joint adversarial generation loss. The former effectively prevents undesired label-flipping during the whole process of image translation, while the latter maintains the joint distribution alignment of images and labels. Furthermore, our approach enforces the classification consistence of target domain images before and after adaptation to aid the classifier training in both domains. Extensive experiments were conducted on multiple benchmark datasets including Digits, Faces, Scenes and Office31, showing that our approach achieved superior classification in the target domain when compared to the state-of-the-art methods. Also, both qualitative and quantitative results well supported our motivation that aligning the class distributions can indeed improve domain adaptation.
Several learning algorithms have been proposed for offline multi-label classification. However, applications in areas such as traffic monitoring, social networks, and sensors produce data continuously, the so called data streams, posing challenges to batch multi-label learning. With the lack of stationarity in the distribution of data streams, new algorithms are needed to online adapt to such changes (concept drift). Also, in realistic applications, changes occur in scenarios of infinitely delayed labels, where the true classes of the arrival instances are never available. We propose an online unsupervised incremental method based on self-organizing maps for multi-label stream classification with infinitely delayed labels. In the classification phase, we use a k-nearest neighbors strategy to compute the winning neurons in the maps, adapting to concept drift by online adjusting neuron weight vectors and dataset label cardinality. We predict labels for each instance using the Bayes rule and the outputs of each neuron, adapting the probabilities and conditional probabilities of the classes in the stream. Experiments using synthetic and real datasets show that our method is highly competitive with several ones from the literature, in both stationary and concept drift scenarios.