Retrieved contexts are often long, noisy, and redundant, motivating query-aware compression before answer generation. Native attention provides signals for context selection, but heterogeneous head behaviors complicate their direct aggregation into sentence-utility scores. We introduce Sentinel, a sentence-level compressor that learns to combine these signals through a signed linear readout across layers and heads. Only the readout is trained using existing QA evidence annotations, while the backbone remains frozen and sentence scoring requires no autoregressive generation. Across twelve LongBench tasks, Sentinel with a 0.5B backbone outperforms Full Context on multiple tasks under a 2,000-token budget with each of three readers: Qwen2.5-7B-Instruct, Llama-3.1-8B-Instruct, and DeepSeek V4.1 Flash. Despite English-only QA supervision, the same readout transfers to Chinese tasks without task-specific retraining. Length-stratified profiling further shows lower compression latency and GPU memory usage than LLMLingua-2 and CPC.
Traditional similarity-based schema matching methods fail to resolve semantic ambiguities and conflicts in complex, domain-specific mappings due to a lack of commonsense and domain-specific knowledge. In parallel, large language models (LLMs) without sufficient background knowledge tend to hallucinate, further complicating schema matching. To overcome these limitations, we introduce KG-RAG4SM, a Knowledge Graph-based Retrieval-Augmented Generation for Schema Matching. This method integrates novel retrieval mechanisms, including LLM-based, vector-based, graph traversal-based, and hybrid techniques with advanced reranking schemes to extract the most relevant subgraphs from large external KGs. Our approach achieves superior results without requiring re-training, as evidenced by improvements of 39.79% in precision and 30.56% in F1 score over LLM-based state-of-the-art (SOTA) methods (e.g., Jellyfish-8B) on the MIMIC dataset, and enhancements of 69.20% in precision and 21.99% in F1 score over pre-trained language model (PLM)-based SOTA methods (e.g., SMAT) on the Synthea dataset. Additionally, KG-RAG4SM scales effectively across KGs from commonsense KGs to domain-specific ones, while its instruction-tuning knowledge exclusion component ensures truthful performance in end-to-end schema matching tasks despite the suboptimal relevance of KG context. Our empirical analysis and case studies from real-world scenarios show that the hallucination problem in LLMs for schema matching is well mitigated by our solution.
Modern Artificial Intelligence (AI) increasingly relies on multi-agent architectures that blend visual and language understanding. Yet, a pressing challenge remains: How can we trust these agents especially in zero-shot settings with no fine-tuning? We introduce a novel modular Agentic AI visual classification framework that integrates generalist multimodal agents with a non-visual reasoning orchestrator and a Retrieval-Augmented Generation (RAG) module. Applied to apple leaf disease diagnosis, we benchmark three configurations: (I) zero-shot with confidence-based orchestration, (II) fine-tuned agents with improved performance, and (III) trust-calibrated orchestration enhanced by CLIP-based image retrieval and re-evaluation loops. Using confidence calibration metrics (ECE, OCR, CCC), the orchestrator modulates trust across agents. Our results demonstrate a 77.94\% accuracy improvement in the zero-shot setting using trust-aware orchestration and RAG, achieving 85.63\% overall. GPT-4o showed better calibration, while Qwen-2.5-VL displayed overconfidence. Furthermore, image-RAG grounded predictions with visually similar cases, enabling correction of agent overconfidence via iterative re-evaluation. The proposed system separates perception (vision agents) from meta-reasoning (orchestrator), enabling scalable and interpretable multi-agent AI. This blueprint is extensible to diagnostics, biology, and other trust-critical domains. All models, prompts, results, and system components including the complete software source code are openly released to support reproducibility, transparency, and community benchmarking at Github: https://github.com/Applied-AI-Research-Lab/Orchestrator-Agent-Trust
World models (WMs) demonstrate strong capabilities in prediction, generation, and planning tasks. Existing WMs primarily focus on unstructured data and cannot leverage the ubiquitous structured data, often represented as graphs, in the digital world. While multiple graph foundation models have been proposed, they focus on graph learning tasks and cannot extend to diverse multi-modal data and interdisciplinary tasks. To address these challenges, we propose the Graph World Model (GWM), a world model that supports both unstructured and graph-structured states with multi-modal information and represents diverse tasks as actions. The core of a GWM is a generic message-passing algorithm to aggregate structured information, either over a unified multi-modal token space by converting multi-modal data into text (GWM-T) or a unified multi-modal embedding space by modality-specific encoders (GWM-E). Notably, GWM introduces action nodes to support diverse tasks, where action nodes are linked to other nodes via direct reference or similarity computation. Extensive experiments on six tasks from diverse domains, including multi-modal generation and matching, recommendation, graph prediction, multi-agent, retrieval-augmented generation, and planning and optimization, show that the same GWM outperforms or matches domain-specific baselines' performance, benefits from multi-hop structures, and demonstrates strong zero-shot/few-shot capabilities on unseen new tasks. Our code for GWM is released at https://github.com/ulab-uiuc/GWM.
Efficiently ranking relevant items from large candidate pools is a cornerstone of modern information retrieval systems -- such as web search, recommendation, and retrieval-augmented generation. Listwise rerankers, which improve relevance by jointly considering multiple candidates, are often limited in practice: either by model input size constraints, or by degraded quality when processing large sets. We propose a model-agnostic method for fast reranking large sets that exceed a model input limits. The method first partitions candidate items into overlapping blocks, each of which is ranked independently in parallel. Implicit pairwise comparisons are then derived from these local rankings. Finally, these comparisons are aggregated to construct a global ranking using algorithms such as Winrate or PageRank. Experiments on TREC DL-2019 show that our method achieves an nDCG@10 of 70.88 compared to the 57.68 for full-context listwise approach using gpt-4.1-mini as long-context model, while reducing latency from 21 to 8 seconds. The implementation of the algorithm and the experiments is available in the repository: https://github.com/V3RGANz/jointrank
Graph-based Retrieval-Augmented Generation (Graph-RAG) enhances large language models (LLMs) by structuring retrieval over an external corpus. However, existing approaches typically assume a static corpus, requiring expensive full-graph reconstruction whenever new documents arrive, limiting their scalability in dynamic, evolving environments. To address these limitations, we introduce EraRAG, a novel multi-layered Graph-RAG framework that supports efficient and scalable dynamic updates. Our method leverages hyperplane-based Locality-Sensitive Hashing (LSH) to partition and organize the original corpus into hierarchical graph structures, enabling efficient and localized insertions of new data without disrupting the existing topology. The design eliminates the need for retraining or costly recomputation while preserving high retrieval accuracy and low latency. Experiments on large-scale benchmarks demonstrate that EraRag achieves up to an order of magnitude reduction in update time and token consumption compared to existing Graph-RAG systems, while providing superior accuracy performance. This work offers a practical path forward for RAG systems that must operate over continually growing corpora, bridging the gap between retrieval efficiency and adaptability. Our code and data are available at https://github.com/EverM0re/EraRAG-Official.
This paper addresses the challenge of developing multimodal recommender systems for the movie domain, where limited metadata (e.g., title, genre) often hinders the generation of robust recommendations. We introduce a resource that combines LLM-generated plot descriptions with trailer-derived visual embeddings in a unified pipeline supporting both Retrieval-Augmented Generation (RAG) and collaborative filtering. Central to our approach is a data augmentation step that transforms sparse metadata into richer textual signals, alongside fusion strategies (e.g., PCA, CCA) that integrate visual cues. Experimental evaluations demonstrate that CCA-based fusion significantly boosts recall compared to unimodal baselines, while an LLM-driven re-ranking step further improves NDCG, particularly in scenarios with limited textual data. By releasing this framework, we invite further exploration of multi-modal recommendation techniques tailored to cold-start, novelty-focused, and domain-specific settings. All code, data, and detailed documentation are publicly available at: https://github.com/RecSys-lab/RAG-VisualRec
Existing research on Retrieval-Augmented Generation (RAG) primarily focuses on improving overall question-answering accuracy, often overlooking the quality of sub-claims within generated responses. Recent methods that attempt to improve RAG trustworthiness, such as through auto-evaluation metrics, lack probabilistic guarantees or require ground truth answers. To address these limitations, we propose Conformal-RAG, a novel framework inspired by recent applications of conformal prediction (CP) on large language models (LLMs). Conformal-RAG leverages CP and internal information from the RAG mechanism to offer statistical guarantees on response quality. It ensures group-conditional coverage spanning multiple sub-domains without requiring manual labelling of conformal sets, making it suitable for complex RAG applications. Compared to existing RAG auto-evaluation methods, Conformal-RAG offers statistical guarantees on the quality of refined sub-claims, ensuring response reliability without the need for ground truth answers. Additionally, our experiments demonstrate that by leveraging information from the RAG system, Conformal-RAG retains up to 60\% more high-quality sub-claims from the response compared to direct applications of CP to LLMs, while maintaining the same reliability guarantee.
Retrieval-Augmented Generation (RAG) systems typically rely on a single fixed retriever, despite growing evidence that no single retriever performs optimally across all query types. In this paper, we explore a query routing approach that dynamically selects from a pool of retrievers based on the query, using both train-free heuristics and learned routing models. We frame routing as a learning-to-rank (LTR) problem and introduce LTRR, a framework that learns to rank retrievers by their expected utility gain to downstream LLM performance. Our experiments, conducted on synthetic QA data with controlled query type variations, show that routing-based RAG systems can outperform the best single-retriever-based systems. Performance gains are especially pronounced in models trained with the Answer Correctness (AC) metric and with pairwise learning approaches, especially with XGBoost. We also observe improvements in generalization to out-of-distribution queries. As part of the SIGIR 2025 LiveRAG challenge, our submitted system demonstrated the practical viability of our approach, achieving competitive performance in both answer correctness and faithfulness. These findings highlight the importance of both training methodology and metric selection in query routing for RAG systems.
Traditional Retrieval-Augmented Generation (RAG) systems employ brute-force inner product search to retrieve the top-k most similar documents, then combined with the user query and passed to a language model. This allows the model to access external knowledge and reduce hallucinations. However, selecting an appropriate k value remains a significant challenge in practical applications: a small k may fail to retrieve sufficient information, while a large k can introduce excessive and irrelevant content. To address this, we propose a hierarchical clustering-based retrieval method that eliminates the need to predefine k. Our approach maintains the accuracy and relevance of system responses while adaptively selecting semantically relevant content. In the experiment stage, we applied our method to a Taiwanese legal dataset with expert-graded queries. The results show that our approach achieves superior performance in expert evaluations and maintains high precision while eliminating the need to predefine k, demonstrating improved accuracy and interpretability in legal text retrieval tasks. Our framework is simple to implement and easily integrates with existing RAG pipelines, making it a practical solution for real-world applications under limited resources.
Retrieval-Augmented Generation (RAG) has become essential for large-scale code generation, grounding predictions in external code corpora to improve actuality. However, a critical yet underexplored aspect of RAG pipelines is chunking -- the process of dividing documents into retrievable units. Existing line-based chunking heuristics often break semantic structures, splitting functions or merging unrelated code, which can degrade generation quality. We propose chunking via Abstract Syntax Trees (\ourwork), a structure-aware method that recursively breaks large AST nodes into smaller chunks and merges sibling nodes while respecting size limits. This approach generates self-contained, semantically coherent units across programming languages and tasks, improving performance on diverse code generation tasks, e.g., boosting Recall@5 by 4.3 points on RepoEval retrieval and Pass@1 by 2.67 points on SWE-bench generation. Our work highlights the importance of structure-aware chunking for scaling retrieval-enhanced code intelligence.
Retrieval-Augmented Generation (RAG) plays a pivotal role in modern large language model applications, with numerous existing frameworks offering a wide range of functionalities to facilitate the development of RAG systems. However, we have identified several persistent challenges in these frameworks, including difficulties in algorithm reproduction and sharing, lack of new techniques, and high system overhead. To address these limitations, we introduce \textbf{FlexRAG}, an open-source framework specifically designed for research and prototyping. FlexRAG supports text-based, multimodal, and network-based RAG, providing comprehensive lifecycle support alongside efficient asynchronous processing and persistent caching capabilities. By offering a robust and flexible solution, FlexRAG enables researchers to rapidly develop, deploy, and share advanced RAG systems. Our toolkit and resources are available at \href{https://github.com/ictnlp/FlexRAG}{https://github.com/ictnlp/FlexRAG}.
Robust deployment of large multimodal models (LMMs) in real-world scenarios requires access to external knowledge sources, given the complexity and dynamic nature of real-world information. Existing approaches such as retrieval-augmented generation (RAG) and prompt engineered search agents rely on rigid pipelines, often leading to inefficient or excessive search behaviors. We present MMSearch-R1, the first end-to-end reinforcement learning framework that enables LMMs to perform on-demand, multi-turn search in real-world Internet environments. Our framework integrates both image and text search tools, allowing the model to reason about when and how to invoke them guided by an outcome-based reward with a search penalty. To support training, We collect a multimodal search VQA dataset through a semi-automated pipeline that covers diverse visual and textual knowledge needs and curate a search-balanced subset with both search-required and search-free samples, which proves essential for shaping efficient and on-demand search behavior. Extensive experiments on knowledge-intensive and info-seeking VQA tasks show that our model not only outperforms RAG-based baselines of the same model size, but also matches the performance of a larger RAG-based model while reducing search calls by over 30%. We further analyze key empirical findings to offer actionable insights for advancing research in multimodal search.
The global demand for sustainable protein sources has accelerated the need for intelligent tools that can rapidly process and synthesise domain-specific scientific knowledge. In this study, we present a proof-of-concept multi-agent Artificial Intelligence (AI) framework designed to support sustainable protein production research, with an initial focus on microbial protein sources. Our Retrieval-Augmented Generation (RAG)-oriented system consists of two GPT-based LLM agents: (1) a literature search agent that retrieves relevant scientific literature on microbial protein production for a specified microbial strain, and (2) an information extraction agent that processes the retrieved content to extract relevant biological and chemical information. Two parallel methodologies, fine-tuning and prompt engineering, were explored for agent optimisation. Both methods demonstrated effectiveness at improving the performance of the information extraction agent in terms of transformer-based cosine similarity scores between obtained and ideal outputs. Mean cosine similarity scores were increased by up to 25%, while universally reaching mean scores of $\geq 0.89$ against ideal output text. Fine-tuning overall improved the mean scores to a greater extent (consistently of $\geq 0.94$) compared to prompt engineering, although lower statistical uncertainties were observed with the latter approach. A user interface was developed and published for enabling the use of the multi-agent AI system, alongside preliminary exploration of additional chemical safety-based search capabilities
Retrieval-Augmented Generation (RAG) addresses limitations of large language models (LLMs) by leveraging a vector database to provide more accurate and up-to-date information. When a user submits a query, RAG executes a vector search to find relevant documents, which are then used to generate a response. However, ensuring the relevance of retrieved documents with a query would be a big challenge. To address this, a secondary model, known as a relevant grader, can be served to verify its relevance. To reduce computational requirements of a relevant grader, a lightweight small language model is preferred. In this work, we finetuned llama-3.2-1b as a relevant grader and achieved a significant increase in precision from 0.1301 to 0.7750. Its precision is comparable to that of llama-3.1-70b. Our code is available at https://github.com/taeheej/Lightweight-Relevance-Grader-in-RAG.
Document Visual Question Answering (DocVQA) is a practical yet challenging task, which is to ask questions based on documents while referring to multiple pages and different modalities of information, e.g, images and tables. To handle multi-modality, recent methods follow a similar Retrieval Augmented Generation (RAG) pipeline, but utilize Visual Language Models (VLMs) based embedding model to embed and retrieve relevant pages as images, and generate answers with VLMs that can accept an image as input. In this paper, we introduce SimpleDoc, a lightweight yet powerful retrieval - augmented framework for DocVQA. It boosts evidence page gathering by first retrieving candidates through embedding similarity and then filtering and re-ranking these candidates based on page summaries. A single VLM-based reasoner agent repeatedly invokes this dual-cue retriever, iteratively pulling fresh pages into a working memory until the question is confidently answered. SimpleDoc outperforms previous baselines by 3.2% on average on 4 DocVQA datasets with much fewer pages retrieved. Our code is available at https://github.com/ag2ai/SimpleDoc.
Graph-based Retrieval-Augmented Generation (RAG) has shown great capability in enhancing Large Language Model (LLM)'s answer with an external knowledge base. Compared to traditional RAG, it introduces a graph as an intermediate representation to capture better structured relational knowledge in the corpus, elevating the precision and comprehensiveness of generation results. However, developers usually face challenges in analyzing the effectiveness of GraphRAG on their dataset due to GraphRAG's complex information processing pipeline and the overwhelming amount of LLM invocations involved during graph construction and query, which limits GraphRAG interpretability and accessibility. This research proposes a visual analysis framework that helps RAG developers identify critical recalls of GraphRAG and trace these recalls through the GraphRAG pipeline. Based on this framework, we develop XGraphRAG, a prototype system incorporating a set of interactive visualizations to facilitate users' analysis process, boosting failure cases collection and improvement opportunities identification. Our evaluation demonstrates the effectiveness and usability of our approach. Our work is open-sourced and available at https://github.com/Gk0Wk/XGraphRAG.
Security vulnerabilities are rapidly increasing in frequency and complexity, creating a shifting threat landscape that challenges cybersecurity defenses. Large Language Models (LLMs) have been widely adopted for cybersecurity threat analysis. When querying LLMs, dealing with new, unseen vulnerabilities is particularly challenging as it lies outside LLMs' pre-trained distribution. Retrieval-Augmented Generation (RAG) pipelines mitigate the problem by injecting up-to-date authoritative sources into the model context, thus reducing hallucinations and increasing the accuracy in responses. Meanwhile, the deployment of LLMs in security-sensitive environments introduces challenges around trust and safety. This raises a critical open question: How to quantify or attribute the generated response to the retrieved context versus the model's pre-trained knowledge? This work proposes LLM Embedding-based Attribution (LEA) -- a novel, explainable metric to paint a clear picture on the 'percentage of influence' the pre-trained knowledge vs. retrieved content has for each generated response. We apply LEA to assess responses to 100 critical CVEs from the past decade, verifying its effectiveness to quantify the insightfulness for vulnerability analysis. Our development of LEA reveals a progression of independency in hidden states of LLMs: heavy reliance on context in early layers, which enables the derivation of LEA; increased independency in later layers, which sheds light on why scale is essential for LLM's effectiveness. This work provides security analysts a means to audit LLM-assisted workflows, laying the groundwork for transparent, high-assurance deployments of RAG-enhanced LLMs in cybersecurity operations.
This paper presents the RMIT--ADM+S participation in the SIGIR 2025 LiveRAG Challenge. Our Generation-Retrieval-Augmented Generation (GRAG) approach relies on generating a hypothetical answer that is used in the retrieval phase, alongside the original question. GRAG also incorporates a pointwise large language model (LLM)-based re-ranking step prior to final answer generation. We describe the system architecture and the rationale behind our design choices. In particular, a systematic evaluation using the Grid of Points (GoP) framework and N-way ANOVA enabled comparison across multiple configurations, including query variant generation, question decomposition, rank fusion strategies, and prompting techniques for answer generation. Our system achieved a Relevance score of 1.199 and a Faithfulness score of 0.477 on the private leaderboard, placing among the top four finalists in the LiveRAG 2025 Challenge.
Retrieval-Augmented Generation (RAG) systems enhance Large Language Models (LLMs) by retrieving relevant documents from external corpora before generating responses. This approach significantly expands LLM capabilities by leveraging vast, up-to-date external knowledge. However, this reliance on external knowledge makes RAG systems vulnerable to corpus poisoning attacks that manipulate generated outputs via poisoned document injection. Existing poisoning attack strategies typically treat the retrieval and generation stages as disjointed, limiting their effectiveness. We propose Joint-GCG, the first framework to unify gradient-based attacks across both retriever and generator models through three innovations: (1) Cross-Vocabulary Projection for aligning embedding spaces, (2) Gradient Tokenization Alignment for synchronizing token-level gradient signals, and (3) Adaptive Weighted Fusion for dynamically balancing attacking objectives. Evaluations demonstrate that Joint-GCG achieves at most 25% and an average of 5% higher attack success rate than previous methods across multiple retrievers and generators. While optimized under a white-box assumption, the generated poisons show unprecedented transferability to unseen models. Joint-GCG's innovative unification of gradient-based attacks across retrieval and generation stages fundamentally reshapes our understanding of vulnerabilities within RAG systems. Our code is available at https://github.com/NicerWang/Joint-GCG.