The global demand for sustainable protein sources has accelerated the need for intelligent tools that can rapidly process and synthesise domain-specific scientific knowledge. In this study, we present a proof-of-concept multi-agent Artificial Intelligence (AI) framework designed to support sustainable protein production research, with an initial focus on microbial protein sources. Our Retrieval-Augmented Generation (RAG)-oriented system consists of two GPT-based LLM agents: (1) a literature search agent that retrieves relevant scientific literature on microbial protein production for a specified microbial strain, and (2) an information extraction agent that processes the retrieved content to extract relevant biological and chemical information. Two parallel methodologies, fine-tuning and prompt engineering, were explored for agent optimisation. Both methods demonstrated effectiveness at improving the performance of the information extraction agent in terms of transformer-based cosine similarity scores between obtained and ideal outputs. Mean cosine similarity scores were increased by up to 25%, while universally reaching mean scores of $\geq 0.89$ against ideal output text. Fine-tuning overall improved the mean scores to a greater extent (consistently of $\geq 0.94$) compared to prompt engineering, although lower statistical uncertainties were observed with the latter approach. A user interface was developed and published for enabling the use of the multi-agent AI system, alongside preliminary exploration of additional chemical safety-based search capabilities
Clinical communication skills are critical in medical education, and practicing and assessing clinical communication skills on a scale is challenging. Although LLM-powered clinical scenario simulations have shown promise in enhancing medical students' clinical practice, providing automated and scalable clinical evaluation that follows nuanced physician judgment is difficult. This paper combines fuzzy logic and Large Language Model (LLM) and proposes LLM-as-a-Fuzzy-Judge to address the challenge of aligning the automated evaluation of medical students' clinical skills with subjective physicians' preferences. LLM-as-a-Fuzzy-Judge is an approach that LLM is fine-tuned to evaluate medical students' utterances within student-AI patient conversation scripts based on human annotations from four fuzzy sets, including Professionalism, Medical Relevance, Ethical Behavior, and Contextual Distraction. The methodology of this paper started from data collection from the LLM-powered medical education system, data annotation based on multidimensional fuzzy sets, followed by prompt engineering and the supervised fine-tuning (SFT) of the pre-trained LLMs using these human annotations. The results show that the LLM-as-a-Fuzzy-Judge achieves over 80\% accuracy, with major criteria items over 90\%, effectively leveraging fuzzy logic and LLM as a solution to deliver interpretable, human-aligned assessment. This work suggests the viability of leveraging fuzzy logic and LLM to align with human preferences, advances automated evaluation in medical education, and supports more robust assessment and judgment practices. The GitHub repository of this work is available at https://github.com/2sigmaEdTech/LLMAsAJudge
Vision-and-Language Navigation (VLN) presents a complex challenge in embodied AI, requiring agents to interpret natural language instructions and navigate through visually rich, unfamiliar environments. Recent advances in large vision-language models (LVLMs), such as CLIP and Flamingo, have significantly improved multimodal understanding but introduced new challenges related to computational cost and real-time deployment. In this project, we propose a modular, plug-and-play navigation framework that decouples vision-language understanding from action planning. By integrating a frozen vision-language model, Qwen2.5-VL-7B-Instruct, with lightweight planning logic, we aim to achieve flexible, fast, and adaptable navigation without extensive model fine-tuning. Our framework leverages prompt engineering, structured history management, and a two-frame visual input strategy to enhance decision-making continuity across navigation steps. We evaluate our system on the Room-to-Room benchmark within the VLN-CE setting using the Matterport3D dataset and Habitat-Lab simulation environment. Although our initial results reveal challenges in generalizing to unseen environments under strict evaluation settings, our modular approach lays a foundation for scalable and efficient navigation systems, highlighting promising directions for future improvement through enhanced environmental priors and expanded multimodal input integration.
To advance time series forecasting (TSF), various methods have been proposed to improve prediction accuracy, evolving from statistical techniques to data-driven deep learning architectures. Despite their effectiveness, most existing methods still adhere to a fast thinking paradigm-relying on extracting historical patterns and mapping them to future values as their core modeling philosophy, lacking an explicit thinking process that incorporates intermediate time series reasoning. Meanwhile, emerging slow-thinking LLMs (e.g., OpenAI-o1) have shown remarkable multi-step reasoning capabilities, offering an alternative way to overcome these issues. However, prompt engineering alone presents several limitations - including high computational cost, privacy risks, and limited capacity for in-depth domain-specific time series reasoning. To address these limitations, a more promising approach is to train LLMs to develop slow thinking capabilities and acquire strong time series reasoning skills. For this purpose, we propose Time-R1, a two-stage reinforcement fine-tuning framework designed to enhance multi-step reasoning ability of LLMs for time series forecasting. Specifically, the first stage conducts supervised fine-tuning for warmup adaptation, while the second stage employs reinforcement learning to improve the model's generalization ability. Particularly, we design a fine-grained multi-objective reward specifically for time series forecasting, and then introduce GRIP (group-based relative importance for policy optimization), which leverages non-uniform sampling to further encourage and optimize the model's exploration of effective reasoning paths. Experiments demonstrate that Time-R1 significantly improves forecast performance across diverse datasets.
A significant portion of the energy consumed by Large Language Models (LLMs) arises from their inference processes; hence developing energy-efficient methods for inference is crucial. While several techniques exist for inference optimization, output compression remains relatively unexplored, with only a few preliminary efforts addressing this aspect. In this work, we first benchmark 12 decoder-only LLMs across 5 datasets, revealing that these models often produce responses that are substantially longer than necessary. We then conduct a comprehensive quality assessment of LLM responses, formally defining six information categories present in LLM responses. We show that LLMs often tend to include redundant or additional information besides the minimal answer. To address this issue of long responses by LLMs, we explore several simple and intuitive prompt-engineering strategies. Empirical evaluation shows that appropriate prompts targeting length reduction and controlling information content can achieve significant energy optimization between 25-60\% by reducing the response length while preserving the quality of LLM responses.
Segment Anything Model 2 (SAM2) exhibits strong generalisation for promptable segmentation in video clips; however, its integration with the audio modality remains underexplored. Existing approaches mainly follow two directions: (1) injecting adapters into the image encoder to receive audio signals, which incurs efficiency costs during prompt engineering, and (2) leveraging additional foundation models to generate visual prompts for the sounding objects, which are often imprecisely localised, leading to misguidance in SAM2. Moreover, these methods overlook the rich semantic interplay between hierarchical visual features and other modalities, resulting in suboptimal cross-modal fusion. In this work, we propose AuralSAM2, comprising the novel AuralFuser module, which externally attaches to SAM2 to integrate features from different modalities and generate feature-level prompts, guiding SAM2's decoder in segmenting sounding targets. Such integration is facilitated by a feature pyramid, further refining semantic understanding and enhancing object awareness in multimodal scenarios. Additionally, the audio-guided contrastive learning is introduced to explicitly align audio and visual representations and to also mitigate biases caused by dominant visual patterns. Results on public benchmarks show that our approach achieves remarkable improvements over the previous methods in the field. Code is available at https://github.com/yyliu01/AuralSAM2.
The development of AI-Generated Video (AIGV) technology has been remarkable in recent years, significantly transforming the paradigm of video content production. However, AIGVs still suffer from noticeable visual quality defects, such as noise, blurriness, frame jitter and low dynamic degree, which severely impact the user's viewing experience. Therefore, an effective automatic visual quality assessment is of great importance for AIGV content regulation and generative model improvement. In this work, we decompose the visual quality of AIGVs into three dimensions: technical quality, motion quality, and video semantics. For each dimension, we design corresponding encoder to achieve effective feature representation. Moreover, considering the outstanding performance of large language models (LLMs) in various vision and language tasks, we introduce a LLM as the quality regression module. To better enable the LLM to establish reasoning associations between multi-dimensional features and visual quality, we propose a specially designed multi-modal prompt engineering framework. Additionally, we incorporate LoRA fine-tuning technology during the training phase, allowing the LLM to better adapt to specific tasks. Our proposed method achieved \textbf{second place} in the NTIRE 2025 Quality Assessment of AI-Generated Content Challenge: Track 2 AI Generated video, demonstrating its effectiveness. Codes can be obtained at https://github.com/QiZelu/AIGVEval.
Automating the enrichment of UML class diagrams with behavioral methods from natural language use cases is a significant challenge. This study evaluates nine large language models (LLMs) in augmenting a methodless UML diagram (21 classes, 17 relationships) using 21 structured waste-management use cases. A total of 90 diagrams (3,373 methods) were assessed across six metrics: method quantity, signature richness (visibility, names, parameters, return types), annotation completeness (linking to use cases/actions), structural fidelity, syntactic correctness (PlantUML compilation), and naming convergence (across models). All LLMs produced valid PlantUML diagrams adhering to UML conventions. Some models excelled in method coverage and annotation accuracy, while others showed richer parameterization but weaker traceability. These results demonstrate that LLMs can generate well-structured methods with consistent naming, advancing automated behavioral modeling. However, inconsistencies in annotations and signatures highlight the need for improved prompt engineering and model selection. The rapid generation of these methods supports Agile practices by enabling faster design iterations. Despite their capabilities, human oversight is essential to ensure accuracy, appropriateness, and semantic alignment. This positions LLMs as collaborative partners in software design. All experimental artifacts (\texttt{.puml}, \texttt{.png}, \texttt{.csv}) are publicly available for reproducibility.
The inherent risk of generating harmful and unsafe content by Large Language Models (LLMs), has highlighted the need for their safety alignment. Various techniques like supervised fine-tuning, reinforcement learning from human feedback, and red-teaming were developed for ensuring the safety alignment of LLMs. However, the robustness of these aligned LLMs is always challenged by adversarial attacks that exploit unexplored and underlying vulnerabilities of the safety alignment. In this paper, we develop a novel black-box jailbreak attack, called BitBypass, that leverages hyphen-separated bitstream camouflage for jailbreaking aligned LLMs. This represents a new direction in jailbreaking by exploiting fundamental information representation of data as continuous bits, rather than leveraging prompt engineering or adversarial manipulations. Our evaluation of five state-of-the-art LLMs, namely GPT-4o, Gemini 1.5, Claude 3.5, Llama 3.1, and Mixtral, in adversarial perspective, revealed the capabilities of BitBypass in bypassing their safety alignment and tricking them into generating harmful and unsafe content. Further, we observed that BitBypass outperforms several state-of-the-art jailbreak attacks in terms of stealthiness and attack success. Overall, these results highlights the effectiveness and efficiency of BitBypass in jailbreaking these state-of-the-art LLMs.
Causality detection and mining are important tasks in information retrieval due to their enormous use in information extraction, and knowledge graph construction. To solve these tasks, in existing literature there exist several solutions -- both unsupervised and supervised. However, the unsupervised methods suffer from poor performance and they often require significant human intervention for causal rule selection, leading to poor generalization across different domains. On the other hand, supervised methods suffer from the lack of large training datasets. Recently, large language models (LLMs) with effective prompt engineering are found to be effective to overcome the issue of unavailability of large training dataset. Yet, in existing literature, there does not exist comprehensive works on causality detection and mining using LLM prompting. In this paper, we present several retrieval-augmented generation (RAG) based dynamic prompting schemes to enhance LLM performance in causality detection and extraction tasks. Extensive experiments over three datasets and five LLMs validate the superiority of our proposed RAG-based dynamic prompting over other static prompting schemes.
Despite advances in large language models (LLMs) on reasoning and instruction-following benchmarks, it remains unclear whether they can reliably produce outputs aligned with a broad variety of user goals, a concept we refer to as steerability. The abundance of methods proposed to modify LLM behavior makes it unclear whether current LLMs are already steerable, or require further intervention. In particular, LLMs may exhibit (i) poor coverage, where rare user goals are underrepresented; (ii) miscalibration, where models overshoot requests; and (iii) side effects, where changes to one dimension of text inadvertently affect others. To systematically evaluate these failures, we introduce a framework based on a multi-dimensional goal space that models user goals and LLM outputs as vectors with dimensions corresponding to text attributes (e.g., reading difficulty). Applied to a text-rewriting task, we find that current LLMs struggle with steerability, as side effects are persistent. Interventions to improve steerability, such as prompt engineering, best-of-$N$ sampling, and reinforcement learning fine-tuning, have varying effectiveness, yet side effects remain problematic. Our findings suggest that even strong LLMs struggle with steerability, and existing alignment strategies may be insufficient. We open-source our steerability evaluation framework at https://github.com/MLD3/steerability.
The emergence of large language model (LLM)-based agents has significantly advanced the development of autonomous machine learning (ML) engineering. However, most existing approaches rely heavily on manual prompt engineering, failing to adapt and optimize based on diverse experimental experiences. Focusing on this, for the first time, we explore the paradigm of learning-based agentic ML, where an LLM agent learns through interactive experimentation on ML tasks using online reinforcement learning (RL). To realize this, we propose a novel agentic ML training framework with three key components: (1) exploration-enriched fine-tuning, which enables LLM agents to generate diverse actions for enhanced RL exploration; (2) step-wise RL, which enables training on a single action step, accelerating experience collection and improving training efficiency; (3) an agentic ML-specific reward module, which unifies varied ML feedback signals into consistent rewards for RL optimization. Leveraging this framework, we train ML-Agent, driven by a 7B-sized Qwen-2.5 LLM for autonomous ML. Remarkably, despite being trained on merely 9 ML tasks, our 7B-sized ML-Agent outperforms the 671B-sized DeepSeek-R1 agent. Furthermore, it achieves continuous performance improvements and demonstrates exceptional cross-task generalization capabilities.
Precise control over language model generation is vital for ensuring both safety and reliability. Although prompt engineering and steering are commonly used to intervene in model behaviors, the vast number of parameters in models often results in highly intertwined internal representations. This interdependency can limit control precision and sometimes lead to unintended side effects. Recent research has explored the use of sparse autoencoders (SAE) to disentangle knowledge in high-dimensional spaces for steering. However, these applications have been limited to toy tasks owing to the nontrivial issue of locating atomic knowledge components. In this paper, we propose Steering Target Atoms (STA), a novel method that isolates and manipulates disentangled knowledge components to enhance safety. Comprehensive experiments demonstrate the effectiveness of our approach. Further analysis reveals that steering exhibits superior robustness and flexibility, particularly in adversarial scenarios. We also apply the steering strategy to the large reasoning model, confirming its effectiveness in precise reasoning control.
Large Language Models (LLMs), despite advanced general capabilities, still suffer from numerous safety risks, especially jailbreak attacks that bypass safety protocols. Understanding these vulnerabilities through black-box jailbreak attacks, which better reflect real-world scenarios, offers critical insights into model robustness. While existing methods have shown improvements through various prompt engineering techniques, their success remains limited against safety-aligned models, overlooking a more fundamental problem: the effectiveness is inherently bounded by the predefined strategy spaces. However, expanding this space presents significant challenges in both systematically capturing essential attack patterns and efficiently navigating the increased complexity. To better explore the potential of expanding the strategy space, we address these challenges through a novel framework that decomposes jailbreak strategies into essential components based on the Elaboration Likelihood Model (ELM) theory and develops genetic-based optimization with intention evaluation mechanisms. To be striking, our experiments reveal unprecedented jailbreak capabilities by expanding the strategy space: we achieve over 90% success rate on Claude-3.5 where prior methods completely fail, while demonstrating strong cross-model transferability and surpassing specialized safeguard models in evaluation accuracy. The code is open-sourced at: https://github.com/Aries-iai/CL-GSO.
As large language models grow in capability and agency, identifying vulnerabilities through red-teaming becomes vital for safe deployment. However, traditional prompt-engineering approaches may prove ineffective once red-teaming turns into a weak-to-strong problem, where target models surpass red-teamers in capabilities. To study this shift, we frame red-teaming through the lens of the capability gap between attacker and target. We evaluate more than 500 attacker-target pairs using LLM-based jailbreak attacks that mimic human red-teamers across diverse families, sizes, and capability levels. Three strong trends emerge: (i) more capable models are better attackers, (ii) attack success drops sharply once the target's capability exceeds the attacker's, and (iii) attack success rates correlate with high performance on social science splits of the MMLU-Pro benchmark. From these trends, we derive a jailbreaking scaling law that predicts attack success for a fixed target based on attacker-target capability gap. These findings suggest that fixed-capability attackers (e.g., humans) may become ineffective against future models, increasingly capable open-source models amplify risks for existing systems, and model providers must accurately measure and control models' persuasive and manipulative abilities to limit their effectiveness as attackers.
Recent trends are emerging in the use of Large Language Models (LLMs) as autonomous agents that take actions based on the content of the user text prompts. We intend to apply these concepts to the field of Control in space, enabling LLMs to play a significant role in the decision-making process for autonomous satellite operations. As a first step towards this goal, we have developed a pure LLM-based solution for the Kerbal Space Program Differential Games (KSPDG) challenge, a public software design competition where participants create autonomous agents for maneuvering satellites involved in non-cooperative space operations, running on the KSP game engine. Our approach leverages prompt engineering, few-shot prompting, and fine-tuning techniques to create an effective LLM-based agent that ranked 2nd in the competition. To the best of our knowledge, this work pioneers the integration of LLM agents into space research. The project comprises several open repositories to facilitate replication and further research. The codebase is accessible on \href{https://github.com/ARCLab-MIT/kspdg}{GitHub}, while the trained models and datasets are available on \href{https://huggingface.co/OhhTuRnz}{Hugging Face}. Additionally, experiment tracking and detailed results can be reviewed on \href{https://wandb.ai/carrusk/huggingface}{Weights \& Biases
Exercise-based rehabilitation improves quality of life and reduces morbidity, mortality, and rehospitalization, though transportation constraints and staff shortages lead to high dropout rates from rehabilitation programs. Virtual platforms enable patients to complete prescribed exercises at home, while AI algorithms analyze performance, deliver feedback, and update clinicians. Although many studies have developed machine learning and deep learning models for exercise quality assessment, few have explored the use of large language models (LLMs) for feedback and are limited by the lack of rehabilitation datasets containing textual feedback. In this paper, we propose a new method in which exercise-specific features are extracted from the skeletal joints of patients performing rehabilitation exercises and fed into pre-trained LLMs. Using a range of prompting techniques, such as zero-shot, few-shot, chain-of-thought, and role-play prompting, LLMs are leveraged to evaluate exercise quality and provide feedback in natural language to help patients improve their movements. The method was evaluated through extensive experiments on two publicly available rehabilitation exercise assessment datasets (UI-PRMD and REHAB24-6) and showed promising results in exercise assessment, reasoning, and feedback generation. This approach can be integrated into virtual rehabilitation platforms to help patients perform exercises correctly, support recovery, and improve health outcomes.
Effective prompt engineering remains a central challenge in fully harnessing the capabilities of LLMs. While well-designed prompts can dramatically enhance performance, crafting them typically demands expert intuition and a nuanced understanding of the task. Moreover, the most impactful prompts often hinge on subtle semantic cues, ones that may elude human perception but are crucial for guiding LLM behavior. In this paper, we introduce PRL (Prompts from Reinforcement Learning), a novel RL-based approach for automatic prompt generation. Unlike previous methods, PRL can produce novel few-shot examples that were not seen during training. Our approach achieves state-of-the-art performance across a range of benchmarks, including text classification, simplification, and summarization. On the classification task, it surpasses prior methods by 2.58% over APE and 1.00% over EvoPrompt. Additionally, it improves the average ROUGE scores on the summarization task by 4.32 over APE and by 2.12 over EvoPrompt and the SARI score on simplification by 6.93 over APE and by 6.01 over EvoPrompt. Our code is available at https://github.com/Batorskq/prl .
Recent advancements in Multi-Agent Systems (MAS) powered by Large Language Models (LLMs) have demonstrated tremendous potential in diverse task scenarios. Nonetheless, existing agentic systems typically rely on predefined agent-role design spaces and static communication structures, limiting their adaptability as well as flexibility in complex interaction environments and leading to subpar performance on highly specialized and expert-level tasks. To address these issues, we introduce HALO, a multi-agent collaboration framework based on a hierarchical reasoning architecture. Specifically, we incorporate a high-level planning agent for task decomposition, mid-level role-design agents for subtask-specific agent instantiation, and low-level inference agents for subtask execution. Particularly, subtask execution is reformulated as a structured workflow search problem, where Monte Carlo Tree Search (MCTS) systematically explores the agentic action space to construct optimal reasoning trajectories. Additionally, as the majority of users lack expertise in prompt engineering, we leverage an Adaptive Prompt Refinement module to transform raw queries into task-specific prompts. Empirical evaluations on Code Generation (HumanEval), General Reasoning (MMLU), and Arithmetic Reasoning (MATH) benchmark datasets highlight the effectiveness of HALO, yielding a 14.4% average improvement over state-of-the-art baselines. Notably, HALO achieves up to 13.3% performance gain on the Moral Scenarios subject in the MMLU benchmark and up to 19.6% performance gain on the Algebra subarea in the MATH benchmark, indicating its advanced proficiency in tackling highly specialized and expert-level tasks. The code repository is available at https://github.com/23japhone/HALO.
Extracting sentence embeddings from large language models (LLMs) is a practical direction, as it requires neither additional data nor fine-tuning. Previous studies usually focus on prompt engineering to guide LLMs to encode the core semantic information of the sentence into the embedding of the last token. However, the last token in these methods still encodes an excess of non-essential information, such as stop words, limiting its encoding capacity. To this end, we propose a Contrastive Prompting (CP) method that introduces an extra auxiliary prompt to elicit better sentence embedding. By contrasting with the auxiliary prompt, CP can steer existing prompts to encode the core semantics of the sentence, rather than non-essential information. CP is a plug-and-play inference-time intervention method that can be combined with various prompt-based methods. Extensive experiments on Semantic Textual Similarity (STS) tasks and downstream classification tasks demonstrate that our method can improve the performance of existing prompt-based methods across different LLMs. Our code will be released at https://github.com/zifengcheng/CP.