In this work, we present a novel approach to multi-label chest X-ray (CXR) image classification that enhances clinical interpretability while maintaining a streamlined, single-model, single-run training pipeline. Leveraging the CheXpert dataset and VisualCheXbert-derived labels, we incorporate hierarchical label groupings to capture clinically meaningful relationships between diagnoses. To achieve this, we designed a custom hierarchical binary cross-entropy (HBCE) loss function that enforces label dependencies using either fixed or data-driven penalty types. Our model achieved a mean area under the receiver operating characteristic curve (AUROC) of 0.903 on the test set. Additionally, we provide visual explanations and uncertainty estimations to further enhance model interpretability. All code, model configurations, and experiment details are made available.
In this work, we apply state-of-the-art self-supervised learning techniques on a large dataset of seafloor imagery, \textit{BenthicNet}, and study their performance for a complex hierarchical multi-label (HML) classification downstream task. In particular, we demonstrate the capacity to conduct HML training in scenarios where there exist multiple levels of missing annotation information, an important scenario for handling heterogeneous real-world data collected by multiple research groups with differing data collection protocols. We find that, when using smaller one-hot image label datasets typical of local or regional scale benthic science projects, models pre-trained with self-supervision on a larger collection of in-domain benthic data outperform models pre-trained on ImageNet. In the HML setting, we find the model can attain a deeper and more precise classification if it is pre-trained with self-supervision on in-domain data. We hope this work can establish a benchmark for future models in the field of automated underwater image annotation tasks and can guide work in other domains with hierarchical annotations of mixed resolution.
Recent advances in Hierarchical Multi-label Classification (HMC), particularly neurosymbolic-based approaches, have demonstrated improved consistency and accuracy by enforcing constraints on a neural model during training. However, such work assumes the existence of such constraints a-priori. In this paper, we relax this strong assumption and present an approach based on Error Detection Rules (EDR) that allow for learning explainable rules about the failure modes of machine learning models. We show that these rules are not only effective in detecting when a machine learning classifier has made an error but also can be leveraged as constraints for HMC, thereby allowing the recovery of explainable constraints even if they are not provided. We show that our approach is effective in detecting machine learning errors and recovering constraints, is noise tolerant, and can function as a source of knowledge for neurosymbolic models on multiple datasets, including a newly introduced military vehicle recognition dataset.
Memes are one of the most popular types of content used in an online disinformation campaign. They are primarily effective on social media platforms since they can easily reach many users. Memes in a disinformation campaign achieve their goal of influencing the users through several rhetorical and psychological techniques, such as causal oversimplification, name-calling, and smear. The SemEval 2024 Task 4 \textit{Multilingual Detection of Persuasion Technique in Memes} on identifying such techniques in the memes is divided across three sub-tasks: ($\mathbf{1}$) Hierarchical multi-label classification using only textual content of the meme, ($\mathbf{2}$) Hierarchical multi-label classification using both, textual and visual content of the meme and ($\mathbf{3}$) Binary classification of whether the meme contains a persuasion technique or not using it's textual and visual content. This paper proposes an ensemble of Class Definition Prediction (CDP) and hyperbolic embeddings-based approaches for this task. We enhance meme classification accuracy and comprehensiveness by integrating HypEmo's hierarchical label embeddings (Chen et al., 2023) and a multi-task learning framework for emotion prediction. We achieve a hierarchical F1-score of 0.60, 0.67, and 0.48 on the respective sub-tasks.
Memes, combining text and images, frequently use metaphors to convey persuasive messages, shaping public opinion. Motivated by this, our team engaged in SemEval-2024 Task 4, a hierarchical multi-label classification task designed to identify rhetorical and psychological persuasion techniques embedded within memes. To tackle this problem, we introduced a caption generation step to assess the modality gap and the impact of additional semantic information from images, which improved our result. Our best model utilizes GPT-4 generated captions alongside meme text to fine-tune RoBERTa as the text encoder and CLIP as the image encoder. It outperforms the baseline by a large margin in all 12 subtasks. In particular, it ranked in top-3 across all languages in Subtask 2a, and top-4 in Subtask 2b, demonstrating quantitatively strong performance. The improvement achieved by the introduced intermediate step is likely attributable to the metaphorical essence of images that challenges visual encoders. This highlights the potential for improving abstract visual semantics encoding.
Existing self-supervised methods in natural language processing (NLP), especially hierarchical text classification (HTC), mainly focus on self-supervised contrastive learning, extremely relying on human-designed augmentation rules to generate contrastive samples, which can potentially corrupt or distort the original information. In this paper, we tend to investigate the feasibility of a contrastive learning scheme in which the semantic and syntactic information inherent in the input sample is adequately reserved in the contrastive samples and fused during the learning process. Specifically, we propose an information lossless contrastive learning strategy for HTC, namely \textbf{H}ierarchy-aware \textbf{I}nformation \textbf{L}ossless contrastive \textbf{L}earning (HILL), which consists of a text encoder representing the input document, and a structure encoder directly generating the positive sample. The structure encoder takes the document embedding as input, extracts the essential syntactic information inherent in the label hierarchy with the principle of structural entropy minimization, and injects the syntactic information into the text representation via hierarchical representation learning. Experiments on three common datasets are conducted to verify the superiority of HILL.
Hierarchical text classification (HTC) is a challenging subtask of multi-label classification as the labels form a complex hierarchical structure. Existing dual-encoder methods in HTC achieve weak performance gains with huge memory overheads and their structure encoders heavily rely on domain knowledge. Under such observation, we tend to investigate the feasibility of a memory-friendly model with strong generalization capability that could boost the performance of HTC without prior statistics or label semantics. In this paper, we propose Hierarchy-aware Tree Isomorphism Network (HiTIN) to enhance the text representations with only syntactic information of the label hierarchy. Specifically, we convert the label hierarchy into an unweighted tree structure, termed coding tree, with the guidance of structural entropy. Then we design a structure encoder to incorporate hierarchy-aware information in the coding tree into text representations. Besides the text encoder, HiTIN only contains a few multi-layer perceptions and linear transformations, which greatly saves memory. We conduct experiments on three commonly used datasets and the results demonstrate that HiTIN could achieve better test performance and less memory consumption than state-of-the-art (SOTA) methods.
Social media has become an important information source for crisis management and provides quick access to ongoing developments and critical information. However, classification models suffer from event-related biases and highly imbalanced label distributions which still poses a challenging task. To address these challenges, we propose a combination of entity-masked language modeling and hierarchical multi-label classification as a multi-task learning problem. We evaluate our method on tweets from the TREC-IS dataset and show an absolute performance gain w.r.t. F1-score of up to 10% for actionable information types. Moreover, we found that entity-masking reduces the effect of overfitting to in-domain events and enables improvements in cross-event generalization.
Automatic topic classification has been studied extensively to assist managing and indexing scientific documents in a digital collection. With the large number of topics being available in recent years, it has become necessary to arrange them in a hierarchy. Therefore, the automatic classification systems need to be able to classify the documents hierarchically. In addition, each paper is often assigned to more than one relevant topic. For example, a paper can be assigned to several topics in a hierarchy tree. In this paper, we introduce a new dataset for hierarchical multi-label text classification (HMLTC) of scientific papers called SciHTC, which contains 186,160 papers and 1,233 categories from the ACM CCS tree. We establish strong baselines for HMLTC and propose a multi-task learning approach for topic classification with keyword labeling as an auxiliary task. Our best model achieves a Macro-F1 score of 34.57% which shows that this dataset provides significant research opportunities on hierarchical scientific topic classification. We make our dataset and code available on Github.
We design a predictive layer for structured-output prediction (SOP) that can be plugged into any neural network guaranteeing its predictions are consistent with a set of predefined symbolic constraints. Our Semantic Probabilistic Layer (SPL) can model intricate correlations, and hard constraints, over a structured output space all while being amenable to end-to-end learning via maximum likelihood. SPLs combine exact probabilistic inference with logical reasoning in a clean and modular way, learning complex distributions and restricting their support to solutions of the constraint. As such, they can faithfully, and efficiently, model complex SOP tasks beyond the reach of alternative neuro-symbolic approaches. We empirically demonstrate that SPLs outperform these competitors in terms of accuracy on challenging SOP tasks including hierarchical multi-label classification, pathfinding and preference learning, while retaining perfect constraint satisfaction.
Gene annotation addresses the problem of predicting unknown associations between gene and functions (e.g., biological processes) of a specific organism. Despite recent advances, the cost and time demanded by annotation procedures that rely largely on in vivo biological experiments remain prohibitively high. This paper presents a novel in silico approach for to the annotation problem that combines cluster analysis and hierarchical multi-label classification (HMC). The approach uses spectral clustering to extract new features from the gene co-expression network (GCN) and enrich the prediction task. HMC is used to build multiple estimators that consider the hierarchical structure of gene functions. The proposed approach is applied to a case study on Zea mays, one of the most dominant and productive crops in the world. The results illustrate how in silico approaches are key to reduce the time and costs of gene annotation. More specifically, they highlight the importance of: (i) building new features that represent the structure of gene relationships in GCNs to annotate genes; and (ii) taking into account the structure of biological processes to obtain consistent predictions.
Multi-label classification (MC) is a standard machine learning problem in which a data point can be associated with a set of classes. A more challenging scenario is given by hierarchical multi-label classification (HMC) problems, in which every prediction must satisfy a given set of hard constraints expressing subclass relationships between classes. In this paper, we propose C-HMCNN(h), a novel approach for solving HMC problems, which, given a network h for the underlying MC problem, exploits the hierarchy information in order to produce predictions coherent with the constraints and to improve performance. Furthermore, we extend the logic used to express HMC constraints in order to be able to specify more complex relations among the classes and propose a new model CCN(h), which extends C-HMCNN(h) and is again able to satisfy and exploit the constraints to improve performance. We conduct an extensive experimental analysis showing the superior performance of both C-HMCNN(h) and CCN(h) when compared to state-of-the-art models in both the HMC and the general MC setting with hard logical constraints.
We consider the problem of multi-label classification where the labels lie in a hierarchy. However, unlike most existing works in hierarchical multi-label classification, we do not assume that the label-hierarchy is known. Encouraged by the recent success of hyperbolic embeddings in capturing hierarchical relations, we propose to jointly learn the classifier parameters as well as the label embeddings. Such a joint learning is expected to provide a twofold advantage: i) the classifier generalizes better as it leverages the prior knowledge of existence of a hierarchy over the labels, and ii) in addition to the label co-occurrence information, the label-embedding may benefit from the manifold structure of the input datapoints, leading to embeddings that are more faithful to the label hierarchy. We propose a novel formulation for the joint learning and empirically evaluate its efficacy. The results show that the joint learning improves over the baseline that employs label co-occurrence based pre-trained hyperbolic embeddings. Moreover, the proposed classifiers achieve state-of-the-art generalization on standard benchmarks. We also present evaluation of the hyperbolic embeddings obtained by joint learning and show that they represent the hierarchy more accurately than the other alternatives.
Hierarchical multi-label classification (HMC) is a challenging classification task extending standard multi-label classification problems by imposing a hierarchy constraint on the classes. In this paper, we propose C-HMCNN(h), a novel approach for HMC problems, which, given a network h for the underlying multi-label classification problem, exploits the hierarchy information in order to produce predictions coherent with the constraint and improve performance. We conduct an extensive experimental analysis showing the superior performance of C-HMCNN(h) when compared to state-of-the-art models.
Predictive clustering trees (PCTs) are a well established generalization of standard decision trees, which can be used to solve a variety of predictive modeling tasks, including structured output prediction. Combining them into ensembles yields state-of-the-art performance. Furthermore, the ensembles of PCTs can be interpreted by calculating feature importance scores from the learned models. However, their learning time scales poorly with the dimensionality of the output space. This is often problematic, especially in (hierarchical) multi-label classification, where the output can consist of hundreds of potential labels. Also, learning of PCTs can not exploit the sparsity of data to improve the computational efficiency, which is common in both input (molecular fingerprints, bag of words representations) and output spaces (in multi-label classification, examples are often labeled with only a fraction of possible labels). In this paper, we propose oblique predictive clustering trees, capable of addressing these limitations. We design and implement two methods for learning oblique splits that contain linear combinations of features in the tests, hence a split corresponds to an arbitrary hyperplane in the input space. The methods are efficient for high dimensional data and capable of exploiting sparse data. We experimentally evaluate the proposed methods on 60 benchmark datasets for 6 predictive modeling tasks. The results of the experiments show that oblique predictive clustering trees achieve performance on-par with state-of-the-art methods and are orders of magnitude faster than standard PCTs. We also show that meaningful feature importance scores can be extracted from the models learned with the proposed methods.
Different from the traditional classification tasks which assume mutual exclusion of labels, hierarchical multi-label classification (HMLC) aims to assign multiple labels to every instance with the labels organized under hierarchical relations. Besides the labels, since linguistic ontologies are intrinsic hierarchies, the conceptual relations between words can also form hierarchical structures. Thus it can be a challenge to learn mappings from word hierarchies to label hierarchies. We propose to model the word and label hierarchies by embedding them jointly in the hyperbolic space. The main reason is that the tree-likeness of the hyperbolic space matches the complexity of symbolic data with hierarchical structures. A new Hyperbolic Interaction Model (HyperIM) is designed to learn the label-aware document representations and make predictions for HMLC. Extensive experiments are conducted on three benchmark datasets. The results have demonstrated that the new model can realistically capture the complex data structures and further improve the performance for HMLC comparing with the state-of-the-art methods. To facilitate future research, our code is publicly available.