Electroencephalography (EEG) allows monitoring of brain activity, providing insights into the functional dynamics of various brain regions and their roles in cognitive processes. EEG is a cornerstone in sleep research, serving as the primary modality of polysomnography, the gold standard in the field. However, EEG signals are prone to artifacts caused by both internal (device-specific) factors and external (environmental) interferences. As sleep studies are becoming larger, most rely on automatic sleep staging, a process highly susceptible to artifacts, leading to erroneous sleep scores. This paper addresses this challenge by introducing eegFloss, an open-source Python package to utilize eegUsability, a novel machine learning (ML) model designed to detect segments with artifacts in sleep EEG recordings. eegUsability has been trained and evaluated on manually artifact-labeled EEG data collected from 15 participants over 127 nights using the Zmax headband. It demonstrates solid overall classification performance (F1-score is approximately 0.85, Cohens kappa is 0.78), achieving a high recall rate of approximately 94% in identifying channel-wise usable EEG data, and extends beyond Zmax. Additionally, eegFloss offers features such as automatic time-in-bed detection using another ML model named eegMobility, filtering out certain artifacts, and generating hypnograms and sleep statistics. By addressing a fundamental challenge faced by most sleep studies, eegFloss can enhance the precision and rigor of their analysis as well as the accuracy and reliability of their outcomes.
Reconstructing the attractors of complex nonlinear dynamical systems from available measurements is key to analyse and predict their time evolution. Existing attractor reconstruction methods typically rely on topological embedding and may produce poor reconstructions, which differ significantly from the actual attractor, because measurements are corrupted by noise and often available only for some of the state variables and/or their combinations, and the time series are often relatively short. Here, we propose the use of Homogeneous Differentiators (HD) to effectively de-noise measurements and more faithfully reconstruct attractors of nonlinear systems. Homogeneous Differentiators are supported by rigorous theoretical guarantees about their de-noising capabilities, and their results can be fruitfully combined with time-delay embedding, differential embedding and functional observability. We apply our proposed HD-based methodology to simulated dynamical models of increasing complexity, from the Lorenz system to the Hindmarsh-Rose model and the Epileptor model for neural dynamics, as well as to empirical data of EEG recordings. In the presence of corrupting noise of various types, we obtain drastically improved quality and resolution of the reconstructed attractors, as well as significantly reduced computational time, which can be orders of magnitude lower than that of alternative methods. Our tests show the flexibility and effectiveness of Homogeneous Differentiators and suggest that they can become the tool of choice for preprocessing noisy signals and reconstructing attractors of highly nonlinear dynamical systems from both theoretical models and real data.
Imagine unlocking the power of the mind to communicate, create, and even interact with the world around us. Recent breakthroughs in Artificial Intelligence (AI), especially in how machines "see" and "understand" language, are now fueling exciting progress in decoding brain signals from scalp electroencephalography (EEG). Prima facie, this opens the door to revolutionary brain-computer interfaces (BCIs) designed for real life, moving beyond traditional uses to envision Brain-to-Speech, Brain-to-Image, and even a Brain-to-Internet of Things (BCIoT). However, the journey is not as straightforward as it was for Computer Vision (CV) and Natural Language Processing (NLP). Applying AI to real-world EEG-based BCIs, particularly in building powerful foundational models, presents unique and intricate hurdles that could affect their reliability. Here, we unfold a guided exploration of this dynamic and rapidly evolving research area. Rather than barely outlining a map of current endeavors and results, the goal is to provide a principled navigation of this hot and cutting-edge research landscape. We consider the basic paradigms that emerge from a causal perspective and the attendant challenges presented to AI-based models. Looking ahead, we then discuss promising research avenues that could overcome today's technological, methodological, and ethical limitations. Our aim is to lay out a clear roadmap for creating truly practical and effective EEG-based BCI solutions that can thrive in everyday environments.
Brain-computer interface (BCI) technology utilizing electroencephalography (EEG) marks a transformative innovation, empowering motor-impaired individuals to engage with their environment on equal footing. Despite its promising potential, developing subject-invariant and session-invariant BCI systems remains a significant challenge due to the inherent complexity and variability of neural activity across individuals and over time, compounded by EEG hardware constraints. While prior studies have sought to develop robust BCI systems, existing approaches remain ineffective in capturing the intricate spatiotemporal dependencies within multichannel EEG signals. This study addresses this gap by introducing the attentive graph-temporal convolutional network (AGTCNet), a novel graph-temporal model for motor imagery EEG (MI-EEG) classification. Specifically, AGTCNet leverages the topographic configuration of EEG electrodes as an inductive bias and integrates graph convolutional attention network (GCAT) to jointly learn expressive spatiotemporal EEG representations. The proposed model significantly outperformed existing MI-EEG classifiers, achieving state-of-the-art performance while utilizing a compact architecture, underscoring its effectiveness and practicality for BCI deployment. With a 49.87% reduction in model size, 64.65% faster inference time, and shorter input EEG signal, AGTCNet achieved a moving average accuracy of 66.82% for subject-independent classification on the BCI Competition IV Dataset 2a, which further improved to 82.88% when fine-tuned for subject-specific classification. On the EEG Motor Movement/Imagery Dataset, AGTCNet achieved moving average accuracies of 64.14% and 85.22% for 4-class and 2-class subject-independent classifications, respectively, with further improvements to 72.13% and 90.54% for subject-specific classifications.
Scalp electroencephalography (EEG) and intracranial EEG (iEEG) are vital for epilepsy diagnosis and treatment. Their unified analysis offers the potential to harness the complementary strengths of each modality but is challenging due to variations in recording montages, amplitude and signal-to-noise ratio (SNR), and frequency components. To address the aforementioned challenges, this paper introduces EpiNT, a novel Transformer-based pre-trained model for unified EEG and iEEG analysis. EpiNT employs channel-independent modeling with masked autoencoders (MAE) and vector quantization (VQ), along with a frequency domain mapping quantizer to capture crucial frequency features. Pre-trained on over 2,700 hours of multi-modal clinical neurophysiological data from 1,199 patients, EpiNT outperformed both randomly initialized models and other pre-trained methods on six downstream classification tasks, demonstrating robust representation learning capabilities. This work presents a promising approach for unified epilepsy neurophysiology analysis.
Electroencephalography (EEG)-based brain-computer interfaces (BCIs) transform spontaneous/evoked neural activity into control commands for external communication. While convolutional neural networks (CNNs) remain the mainstream backbone for EEG decoding, their inherently short receptive field makes it difficult to capture long-range temporal dependencies and global inter-channel relationships. Recent CNN-Transformer (Conformers) hybrids partially address this issue, but most adopt a serial design, resulting in suboptimal integration of local and global features, and often overlook explicit channel-wise modeling. To address these limitations, we propose DBConformer, a dual-branch convolutional Transformer network tailored for EEG decoding. It integrates a temporal Conformer to model long-range temporal dependencies and a spatial Conformer to extract inter-channel interactions, capturing both temporal dynamics and spatial patterns in EEG signals. A lightweight channel attention module further refines spatial representations by assigning data-driven importance to EEG channels. Extensive experiments on five motor imagery (MI) datasets and two seizure detection datasets under three evaluation settings demonstrate that DBConformer consistently outperforms 10 competitive baseline models, with over eight times fewer parameters than the high-capacity EEG Conformer baseline. Further, the visualization results confirm that the features extracted by DBConformer are physiologically interpretable and aligned with sensorimotor priors in MI. The superior performance and interpretability of DBConformer make it reliable for robust and explainable EEG decoding. Code is publicized at https://github.com/wzwvv/DBConformer.
Micro-expressions (MEs) are subtle, fleeting nonverbal cues that reveal an individual's genuine emotional state. Their analysis has attracted considerable interest due to its promising applications in fields such as healthcare, criminal investigation, and human-computer interaction. However, existing ME research is limited to single visual modality, overlooking the rich emotional information conveyed by other physiological modalities, resulting in ME recognition and spotting performance far below practical application needs. Therefore, exploring the cross-modal association mechanism between ME visual features and physiological signals (PS), and developing a multimodal fusion framework, represents a pivotal step toward advancing ME analysis. This study introduces a novel ME dataset, MMME, which, for the first time, enables synchronized collection of facial action signals (MEs), central nervous system signals (EEG), and peripheral PS (PPG, RSP, SKT, EDA, and ECG). By overcoming the constraints of existing ME corpora, MMME comprises 634 MEs, 2,841 macro-expressions (MaEs), and 2,890 trials of synchronized multimodal PS, establishing a robust foundation for investigating ME neural mechanisms and conducting multimodal fusion-based analyses. Extensive experiments validate the dataset's reliability and provide benchmarks for ME analysis, demonstrating that integrating MEs with PS significantly enhances recognition and spotting performance. To the best of our knowledge, MMME is the most comprehensive ME dataset to date in terms of modality diversity. It provides critical data support for exploring the neural mechanisms of MEs and uncovering the visual-physiological synergistic effects, driving a paradigm shift in ME research from single-modality visual analysis to multimodal fusion. The dataset will be publicly available upon acceptance of this paper.
In Brain-Computer Interface (BCI) research, the detailed study of blinks is crucial. They can be considered as noise, affecting the efficiency and accuracy of decoding users' cognitive states and intentions, or as potential features, providing valuable insights into users' behavior and interaction patterns. We introduce a large dataset capturing electroencephalogram (EEG) signals, eye-tracking, high-speed camera recordings, as well as subjects' mental states and characteristics, to provide a multifactor analysis of eye-related movements. Four paradigms -- motor imagery, motor execution, steady-state visually evoked potentials, and P300 spellers -- are selected due to their capacity to evoke various sensory-motor responses and potential influence on ocular activity. This online-available dataset contains over 46 hours of data from 31 subjects across 63 sessions, totaling 2520 trials for each of the first three paradigms, and 5670 for P300. This multimodal and multi-paradigms dataset is expected to allow the development of algorithms capable of efficiently handling eye-induced artifacts and enhancing task-specific classification. Furthermore, it offers the opportunity to evaluate the cross-paradigm robustness involving the same participants.
Despite advances in deep learning for automatic sleep staging, clinical adoption remains limited due to challenges in fair model evaluation, generalization across diverse datasets, model bias, and variability in human annotations. We present SLEEPYLAND, an open-source sleep staging evaluation framework designed to address these barriers. It includes more than 220'000 hours in-domain (ID) sleep recordings, and more than 84'000 hours out-of-domain (OOD) sleep recordings, spanning a broad range of ages, sleep-wake disorders, and hardware setups. We release pre-trained models based on high-performing SoA architectures and evaluate them under standardized conditions across single- and multi-channel EEG/EOG configurations. We introduce SOMNUS, an ensemble combining models across architectures and channel setups via soft voting. SOMNUS achieves robust performance across twenty-four different datasets, with macro-F1 scores between 68.7% and 87.2%, outperforming individual models in 94.9% of cases. Notably, SOMNUS surpasses previous SoA methods, even including cases where compared models were trained ID while SOMNUS treated the same data as OOD. Using a subset of the BSWR (N=6'633), we quantify model biases linked to age, gender, AHI, and PLMI, showing that while ensemble improves robustness, no model architecture consistently minimizes bias in performance and clinical markers estimation. In evaluations on OOD multi-annotated datasets (DOD-H, DOD-O), SOMNUS exceeds the best human scorer, i.e., MF1 85.2% vs 80.8% on DOD-H, and 80.2% vs 75.9% on DOD-O, better reproducing the scorer consensus than any individual expert (k = 0.89/0.85 and ACS = 0.95/0.94 for healthy/OSA cohorts). Finally, we introduce ensemble disagreement metrics - entropy and inter-model divergence based - predicting regions of scorer disagreement with ROC AUCs up to 0.828, offering a data-driven proxy for human uncertainty.
Decoding continuous language from neural signals remains a significant challenge in the intersection of neuroscience and artificial intelligence. We introduce Neuro2Semantic, a novel framework that reconstructs the semantic content of perceived speech from intracranial EEG (iEEG) recordings. Our approach consists of two phases: first, an LSTM-based adapter aligns neural signals with pre-trained text embeddings; second, a corrector module generates continuous, natural text directly from these aligned embeddings. This flexible method overcomes the limitations of previous decoding approaches and enables unconstrained text generation. Neuro2Semantic achieves strong performance with as little as 30 minutes of neural data, outperforming a recent state-of-the-art method in low-data settings. These results highlight the potential for practical applications in brain-computer interfaces and neural decoding technologies.
The brain-assisted target speaker extraction (TSE) aims to extract the attended speech from mixed speech by utilizing the brain neural activities, for example Electroencephalography (EEG). However, existing models overlook the issue of temporal misalignment between speech and EEG modalities, which hampers TSE performance. In addition, the speech encoder in current models typically uses basic temporal operations (e.g., one-dimensional convolution), which are unable to effectively extract target speaker information. To address these issues, this paper proposes a multi-scale and multi-modal alignment network (M3ANet) for brain-assisted TSE. Specifically, to eliminate the temporal inconsistency between EEG and speech modalities, the modal alignment module that uses a contrastive learning strategy is applied to align the temporal features of both modalities. Additionally, to fully extract speech information, multi-scale convolutions with GroupMamba modules are used as the speech encoder, which scans speech features at each scale from different directions, enabling the model to capture deep sequence information. Experimental results on three publicly available datasets show that the proposed model outperforms current state-of-the-art methods across various evaluation metrics, highlighting the effectiveness of our proposed method. The source code is available at: https://github.com/fchest/M3ANet.
Reconstructing visual stimuli from EEG signals is a crucial step in realizing brain-computer interfaces. In this paper, we propose a transformer-based EEG signal encoder integrating the Discrete Wavelet Transform (DWT) and the gating mechanism. Guided by the feature alignment and category-aware fusion losses, this encoder is used to extract features related to visual stimuli from EEG signals. Subsequently, with the aid of a pre-trained diffusion model, these features are reconstructed into visual stimuli. To verify the effectiveness of the model, we conducted EEG-to-image generation and classification tasks using the THINGS-EEG dataset. To address the limitations of quantitative analysis at the semantic level, we combined WordNet-based classification and semantic similarity metrics to propose a novel semantic-based score, emphasizing the ability of our model to transfer neural activities into visual representations. Experimental results show that our model significantly improves semantic alignment and classification accuracy, which achieves a maximum single-subject accuracy of 43\%, outperforming other state-of-the-art methods. The source code and supplementary material is available at https://github.com/zes0v0inn/DWT_EEG_Reconstruction/tree/main.
Aperiodic neural activity has been the subject of intense research interest lately as it could reflect on the cortical excitation/inhibition ratio, which is suspected to be affected in numerous clinical conditions. This phenomenon is characterized via the aperiodic scaling exponent $\beta$, equal to the spectral slope following log-log transformation of power spectra. Despite recent progress, however, most current methods do not take into consideration the plausible multimodal nature in the power spectra of neurophysiological recordings - i.e., $\beta$ might be different in low- ($\beta_{lo}$) and high-frequency ($\beta_{hi}$) regimes -, especially in case of $|\beta_{lo}|>|\beta_{hi}|$. Here we propose an algorithm, the multi-modal spectral parametrization method (MMSPM) that aims to account for this issue. MMSPM estimates $\beta_{lo}$ and $\beta_{hi}$ separately using a constrained, piece-wise regression technique, and also assesses if they are significantly different or instead the spectrum is indeed unimodal and can be characterized simply with broadband $\beta$. Here we present the MMSPM algorithm and evaluate its performance in silico on simulated power spectra. Then, we use MMSPM on resting-state electroencephalography (EEG) data collected from 19 young, healthy volunteers, as well as on a separate dataset of EEG recordings from 30 schizophrenia patients and 31 healthy controls, and demonstrate that broadband (0.1-100 Hz and 0.5-45 Hz) EEG spectra can indeed present a bimodality pattern with significantly steeper low-range ($<\sim2$ Hz) and flatter high-range scaling regimes (i.e., $|\beta_{lo}|>|\beta_{hi}|$). Clinical relevance: The MMSPM method characterizes aperiodic neural activity in distinct scaling regimes, which can be relevant in numerous pathological conditions such as dementia or schizophrenia.
Electroencephalography-based Emotion Recognition (EEG-ER) has become a growing research area in recent years. Analyzing 216 papers published between 2018 and 2023, we uncover that the field lacks a unified evaluation protocol, which is essential to fairly define the state of the art, compare new approaches and to track the field's progress. We report the main inconsistencies between the used evaluation protocols, which are related to ground truth definition, evaluation metric selection, data splitting types (e.g., subject-dependent or subject-independent) and the use of different datasets. Capitalizing on this state-of-the-art research, we propose a unified evaluation protocol, EEGain (https://github.com/EmotionLab/EEGain), which enables an easy and efficient evaluation of new methods and datasets. EEGain is a novel open source software framework, offering the capability to compare - and thus define - state-of-the-art results. EEGain includes standardized methods for data pre-processing, data splitting, evaluation metrics, and the ability to load the six most relevant datasets (i.e., AMIGOS, DEAP, DREAMER, MAHNOB-HCI, SEED, SEED-IV) in EEG-ER with only a single line of code. In addition, we have assessed and validated EEGain using these six datasets on the four most common publicly available methods (EEGNet, DeepConvNet, ShallowConvNet, TSception). This is a significant step to make research on EEG-ER more reproducible and comparable, thereby accelerating the overall progress of the field.
With the rapid advancement of large language models like Gemini, GPT, and others, bridging the gap between the human brain and language processing has become an important area of focus. To address this challenge, researchers have developed various models to decode EEG signals into text. However, these models still face significant performance limitations. To overcome these shortcomings, we propose a new model, R1 Translator, which aims to improve the performance of EEG-to-text decoding. The R1 Translator model combines a bidirectional LSTM encoder with a pretrained transformer-based decoder, utilizing EEG features to produce high-quality text outputs. The model processes EEG embeddings through the LSTM to capture sequential dependencies, which are then fed into the transformer decoder for effective text generation. The R1 Translator excels in ROUGE metrics, outperforming both T5 (previous research) and Brain Translator. Specifically, R1 achieves a ROUGE-1 score of 38.00% (P), which is up to 9% higher than T5 (34.89%) and 3% better than Brain (35.69%). It also leads in ROUGE-L, with a F1 score of 32.51%, outperforming T5 by 3% (29.67%) and Brain by 2% (30.38%). In terms of CER, R1 achieves a CER of 0.5795, which is 2% lower than T5 (0.5917) and 4% lower than Brain (0.6001). Additionally, R1 performs better in WER with a score of 0.7280, outperforming T5 by 4.3% (0.7610) and Brain by 3.6% (0.7553). Code is available at https://github.com/Mmurrad/EEG-To-text.
Deep learning is significantly advancing the analysis of electroencephalography (EEG) data by effectively discovering highly nonlinear patterns within the signals. Data partitioning and cross-validation are crucial for assessing model performance and ensuring study comparability, as they can produce varied results and data leakage due to specific signal properties (e.g., biometric). Such variability leads to incomparable studies and, increasingly, overestimated performance claims, which are detrimental to the field. Nevertheless, no comprehensive guidelines for proper data partitioning and cross-validation exist in the domain, nor is there a quantitative evaluation of their impact on model accuracy, reliability, and generalizability. To assist researchers in identifying optimal experimental strategies, this paper thoroughly investigates the role of data partitioning and cross-validation in evaluating EEG deep learning models. Five cross-validation settings are compared across three supervised cross-subject classification tasks (BCI, Parkinson's, and Alzheimer's disease detection) and four established architectures of increasing complexity (ShallowConvNet, EEGNet, DeepConvNet, and Temporal-based ResNet). The comparison of over 100,000 trained models underscores, first, the importance of using subject-based cross-validation strategies for evaluating EEG deep learning models, except when within-subject analyses are acceptable (e.g., BCI). Second, it highlights the greater reliability of nested approaches (N-LNSO) compared to non-nested counterparts, which are prone to data leakage and favor larger models overfitting to validation data. In conclusion, this work provides EEG deep learning researchers with an analysis of data partitioning and cross-validation and offers guidelines to avoid data leakage, currently undermining the domain with potentially overestimated performance claims.
Emotion recognition is essential across numerous fields, including medical applications and brain-computer interface (BCI). Emotional responses include behavioral reactions, such as tone of voice and body movement, and changes in physiological signals, such as the electroencephalogram (EEG). The latter are involuntary, thus they provide a reliable input for identifying emotions, in contrast to the former which individuals can consciously control. These signals reveal true emotional states without intentional alteration, thus increasing the accuracy of emotion recognition models. However, multimodal deep learning methods from physiological signals have not been significantly investigated. In this paper, we introduce PHemoNet, a fully hypercomplex network for multimodal emotion recognition from physiological signals. In detail, the architecture comprises modality-specific encoders and a fusion module. Both encoders and fusion modules are defined in the hypercomplex domain through parameterized hypercomplex multiplications (PHMs) that can capture latent relations between the different dimensions of each modality and between the modalities themselves. The proposed method outperforms current state-of-the-art models on the MAHNOB-HCI dataset in classifying valence and arousal using electroencephalograms (EEGs) and peripheral physiological signals. The code for this work is available at https://github.com/ispamm/MHyEEG.
High-resolution functional magnetic resonance imaging (fMRI) is essential for mapping human brain activity; however, it remains costly and logistically challenging. If comparable volumes could be generated directly from widely available scalp electroencephalography (EEG), advanced neuroimaging would become significantly more accessible. Existing EEG-to-fMRI generators rely on plain CNNs that fail to capture cross-channel time-frequency cues or on heavy transformer/GAN decoders that strain memory and stability. We propose Spec2VolCAMU-Net, a lightweight spectrogram-to-volume generator that confronts these issues via a Multi-directional Time-Frequency Convolutional Attention Encoder, stacking temporal, spectral and joint convolutions with self-attention, and a Vision-Mamba U-Net decoder whose linear-time state-space blocks enable efficient long-range spatial modelling. Trained end-to-end with a hybrid SSI-MSE loss, Spec2VolCAMU-Net achieves state-of-the-art fidelity on three public benchmarks, recording SSIMs of 0.693 on NODDI, 0.725 on Oddball and 0.788 on CN-EPFL, representing improvements of 14.5%, 14.9%, and 16.9% respectively over previous best SSIM scores. Furthermore, it achieves competitive PSNR scores, particularly excelling on the CN-EPFL dataset with a 4.6% improvement over the previous best PSNR, thus striking a better balance in reconstruction quality. The proposed model is lightweight and efficient, making it suitable for real-time applications in clinical and research settings. The code is available at https://github.com/hdy6438/Spec2VolCAMU-Net.
Electroencephalogram (EEG) data is crucial for diagnosing mental health conditions but is costly and time-consuming to collect at scale. Synthetic data generation offers a promising solution to augment datasets for machine learning applications. However, generating high-quality synthetic EEG that preserves emotional and mental health signals remains challenging. This study proposes a method combining correlation analysis and random sampling to generate realistic synthetic EEG data. We first analyze interdependencies between EEG frequency bands using correlation analysis. Guided by this structure, we generate synthetic samples via random sampling. Samples with high correlation to real data are retained and evaluated through distribution analysis and classification tasks. A Random Forest model trained to distinguish synthetic from real EEG performs at chance level, indicating high fidelity. The generated synthetic data closely match the statistical and structural properties of the original EEG, with similar correlation coefficients and no significant differences in PERMANOVA tests. This method provides a scalable, privacy-preserving approach for augmenting EEG datasets, enabling more efficient model training in mental health research.
Electroencephalography (EEG) signals provide a promising and involuntary reflection of brain activity related to emotional states, offering significant advantages over behavioral cues like facial expressions. However, EEG signals are often noisy, affected by artifacts, and vary across individuals, complicating emotion recognition. While multimodal approaches have used Peripheral Physiological Signals (PPS) like GSR to complement EEG, they often overlook the dynamic synchronization and consistent semantics between the modalities. Additionally, the temporal dynamics of emotional fluctuations across different time resolutions in PPS remain underexplored. To address these challenges, we propose PhysioSync, a novel pre-training framework leveraging temporal and cross-modal contrastive learning, inspired by physiological synchronization phenomena. PhysioSync incorporates Cross-Modal Consistency Alignment (CM-CA) to model dynamic relationships between EEG and complementary PPS, enabling emotion-related synchronizations across modalities. Besides, it introduces Long- and Short-Term Temporal Contrastive Learning (LS-TCL) to capture emotional synchronization at different temporal resolutions within modalities. After pre-training, cross-resolution and cross-modal features are hierarchically fused and fine-tuned to enhance emotion recognition. Experiments on DEAP and DREAMER datasets demonstrate PhysioSync's advanced performance under uni-modal and cross-modal conditions, highlighting its effectiveness for EEG-centered emotion recognition.