Large Language Models (LLMs) have advanced code generation and software automation, but are fundamentally constrained by limited inference-time context and lack of explicit code structure reasoning. We introduce Kodezi Chronos, a next-generation architecture for autonomous code understanding, debugging, and maintenance, designed to operate across ultra-long contexts comprising entire codebases, histories, and documentation, all without fixed window limits. Kodezi Chronos leverages a multi-level embedding memory engine, combining vector and graph-based indexing with continuous code-aware retrieval. This enables efficient and accurate reasoning over millions of lines of code, supporting repository-scale comprehension, multi-file refactoring, and real-time self-healing actions. Our evaluation introduces a novel Multi Random Retrieval benchmark, specifically tailored to the software engineering domain. Unlike classical retrieval benchmarks, this method requires the model to resolve arbitrarily distant and obfuscated associations across code artifacts, simulating realistic tasks such as variable tracing, dependency migration, and semantic bug localization. Chronos outperforms prior LLMs and code models, demonstrating a 23% improvement in real-world bug detection and reducing debugging cycles by up to 40% compared to traditional sequence-based approaches. By natively interfacing with IDEs and CI/CD workflows, Chronos enables seamless, autonomous software maintenance, elevating code reliability and productivity while reducing manual effort. These results mark a critical advance toward self-sustaining, continuously optimized software ecosystems.
Diffusion-based large language models (dLLMs) have recently emerged as a powerful alternative to autoregressive LLMs, offering faster inference and greater interactivity via parallel decoding and bidirectional modeling. However, despite strong performance in code generation and text infilling, we identify a fundamental safety concern: existing alignment mechanisms fail to safeguard dLLMs against context-aware, masked-input adversarial prompts, exposing novel vulnerabilities. To this end, we present DIJA, the first systematic study and jailbreak attack framework that exploits unique safety weaknesses of dLLMs. Specifically, our proposed DIJA constructs adversarial interleaved mask-text prompts that exploit the text generation mechanisms of dLLMs, i.e., bidirectional modeling and parallel decoding. Bidirectional modeling drives the model to produce contextually consistent outputs for masked spans, even when harmful, while parallel decoding limits model dynamic filtering and rejection sampling of unsafe content. This causes standard alignment mechanisms to fail, enabling harmful completions in alignment-tuned dLLMs, even when harmful behaviors or unsafe instructions are directly exposed in the prompt. Through comprehensive experiments, we demonstrate that DIJA significantly outperforms existing jailbreak methods, exposing a previously overlooked threat surface in dLLM architectures. Notably, our method achieves up to 100% keyword-based ASR on Dream-Instruct, surpassing the strongest prior baseline, ReNeLLM, by up to 78.5% in evaluator-based ASR on JailbreakBench and by 37.7 points in StrongREJECT score, while requiring no rewriting or hiding of harmful content in the jailbreak prompt. Our findings underscore the urgent need for rethinking safety alignment in this emerging class of language models. Code is available at https://github.com/ZichenWen1/DIJA.
Large language models (LLMs) have recently achieved notable success in code-generation benchmarks such as HumanEval and LiveCodeBench. However, a detailed examination reveals that these evaluation suites often comprise only a limited number of homogeneous test cases, resulting in subtle faults going undetected. This not only artificially inflates measured performance but also compromises accurate reward estimation in reinforcement learning frameworks utilizing verifiable rewards (RLVR). To address these critical shortcomings, we systematically investigate the test-case generation (TCG) task by proposing multi-dimensional metrics designed to rigorously quantify test-suite thoroughness. Furthermore, we introduce a human-LLM collaborative method (SAGA), leveraging human programming expertise with LLM reasoning capability, aimed at significantly enhancing both the coverage and the quality of generated test cases. In addition, we develop a TCGBench to facilitate the study of the TCG task. Experiments show that SAGA achieves a detection rate of 90.62% and a verifier accuracy of 32.58% on TCGBench. The Verifier Accuracy (Verifier Acc) of the code generation evaluation benchmark synthesized by SAGA is 10.78% higher than that of LiveCodeBench-v6. These results demonstrate the effectiveness of our proposed method. We hope this work contributes to building a scalable foundation for reliable LLM code evaluation, further advancing RLVR in code generation, and paving the way for automated adversarial test synthesis and adaptive benchmark integration.
As Large Language Models (LLMs) demonstrate increasingly sophisticated code processing capabilities, evaluating their performance on engineering-level code remains challenging. Existing repository-level benchmarks primarily focus on single scenarios, such as code generation or bug fixing, without adequately capturing the diversity and complexity of real-world software or project engineering workflows. Furthermore, these benchmarks suffer from limited controllability in question positioning and reliability issues in their generated test cases. To address these limitations, we present CorePipe, a fully automated pipeline that converts repositories into comprehensive test cases, and introduce CoreCodeBench, a configurable multi-scenario repository-level benchmark. To simulate real engineering scenarios, CorePipe generates three types of atomic questions (Development, BugFix, and Test-Driven Development) specifically targeting core code segments. These atomic questions are further combined into three types of composite questions, with difficulty levels flexibly adjusted through hyperparameter tuning. CoreCodeBench provides a comprehensive and extensive repository-level benchmark to investigate the applicability of LLMs in real-world engineering projects. Experiments with 16 LLMs across diverse scenarios reveal varying capabilities and offer multi-dimensional insights into LLM performance in engineering contexts. The code for CorePipe is available at https://github.com/AGI-Eval-Official/CoreCodeBench, and the data for CoreCodeBench can be accessed at https://huggingface.co/collections/tubehhh/corecodebench-68256d2faabf4b1610a08caa.
Generating code from natural language specifications is one of the most successful applications of Large Language Models (LLMs). Yet, they hallucinate: LLMs produce outputs that may be grammatically correct but are factually incorrect. Without an existing, correct implementation (i.e., an oracle), can we quantify how likely the generated program is correct? In this paper, we propose a measure of incorrectness, called incoherence, that can be estimated efficiently in the absence of an oracle and provides a lower bound on the error, i.e., the probability that the LLM-generated program for that specification is incorrect. Our experiments demonstrate an extraordinary effectiveness. For the average code generation task, our incoherence-based methodology can automatically identify about two-thirds of incorrect programs without reports of false positives. In fact, an oracle-based evaluation of LLMs can be reliably replaced by an incoherence-based evaluation. In particular, we find a very strong agreement between the ranking of LLMs by the number of programs deemed correct via an oracle (pass@1) and the ranking of LLMs by the number of programs deemed correct via our incoherence.
Multi-agent systems (MAS) have emerged as a powerful paradigm for orchestrating large language models (LLMs) and specialized tools to collaboratively address complex tasks. However, existing MAS frameworks often require manual workflow configuration and lack native support for dynamic evolution and performance optimization. In addition, many MAS optimization algorithms are not integrated into a unified framework. In this paper, we present EvoAgentX, an open-source platform that automates the generation, execution, and evolutionary optimization of multi-agent workflows. EvoAgentX employs a modular architecture consisting of five core layers: the basic components, agent, workflow, evolving, and evaluation layers. Specifically, within the evolving layer, EvoAgentX integrates three MAS optimization algorithms, TextGrad, AFlow, and MIPRO, to iteratively refine agent prompts, tool configurations, and workflow topologies. We evaluate EvoAgentX on HotPotQA, MBPP, and MATH for multi-hop reasoning, code generation, and mathematical problem solving, respectively, and further assess it on real-world tasks using GAIA. Experimental results show that EvoAgentX consistently achieves significant performance improvements, including a 7.44% increase in HotPotQA F1, a 10.00% improvement in MBPP pass@1, a 10.00% gain in MATH solve accuracy, and an overall accuracy improvement of up to 20.00% on GAIA. The source code is available at: https://github.com/EvoAgentX/EvoAgentX
Large Language Models (LLMs) have achieved impressive results on static code-generation benchmarks, but real-world software development unfolds as a continuous stream of evolving issues, fixes, and feature requests. We introduce SWE-Bench-CL, a novel continual learning benchmark built on the human-verified SWE-Bench Verified dataset introduced by OpenAI and Princeton-NLP in 2024. By organizing GitHub issues into chronologically ordered sequences that reflect natural repository evolution, SWE-Bench-CL enables direct evaluation of an agent's ability to accumulate experience, transfer knowledge across tasks, and resist catastrophic forgetting. We complement the dataset with (i) a preliminary analysis of inter-task structural similarity and contextual sensitivity, (ii) an interactive LangGraph-based evaluation framework augmented with a FAISS-backed semantic memory module, and (iii) a suite of specialized continual learning metrics -- including average accuracy, forgetting, forward/backward transfer, tool-use efficiency, and a generalized Composite Continual Learning Score and CL-F-beta score -- to capture the stability-plasticity trade-off. We outline a rigorous experimental protocol comparing memory-enabled and memory-disabled agents across diverse Python repositories. All code and data are publicly available at https://github.com/thomasjoshi/agents-never-forget, providing the community with a reproducible platform for developing more adaptive and robust AI agents in software engineering.
Recent progress in autonomous code generation has fueled excitement around AI agents capable of accelerating scientific discovery by running experiments. However, there is currently no benchmark that evaluates whether such agents can implement scientific ideas when given varied amounts of code as a starting point, interpolating between reproduction (running code) and from-scratch replication (fully re-implementing and running code). We introduce AutoExperiment, a benchmark that evaluates AI agents' ability to implement and run machine learning experiments based on natural language descriptions in research papers. In each task, agents are given a research paper, a codebase with key functions masked out, and a command to run the experiment. The goal is to generate the missing code, execute the experiment in a sandboxed environment, and reproduce the results. AutoExperiment scales in difficulty by varying the number of missing functions $n$, ranging from partial reproduction to full replication. We evaluate state-of-the-art agents and find that performance degrades rapidly as $n$ increases. Agents that can dynamically interact with the environment (e.g. to debug their code) can outperform agents in fixed "agentless" harnesses, and there exists a significant gap between single-shot and multi-trial success rates (Pass@1 vs. Pass@5), motivating verifier approaches to our benchmark. Our findings highlight critical challenges in long-horizon code generation, context retrieval, and autonomous experiment execution, establishing AutoExperiment as a new benchmark for evaluating progress in AI-driven scientific experimentation. Our data and code are open-sourced at https://github.com/j1mk1m/AutoExperiment .
LaTeX's precision and flexibility in typesetting have made it the gold standard for the preparation of scientific documentation. Large Language Models (LLMs) present a promising opportunity for researchers to produce publication-ready material using LaTeX with natural language instructions, yet current benchmarks completely lack evaluation of this ability. By introducing TeXpert, our benchmark dataset with natural language prompts for generating LaTeX code focused on components of scientific documents across multiple difficulty levels, we conduct an in-depth analysis of LLM performance in this regard and identify frequent error types. Our evaluation across open and closed-source LLMs highlights multiple key findings: LLMs excelling on standard benchmarks perform poorly in LaTeX generation with a significant accuracy drop-off as the complexity of tasks increases; open-source models like DeepSeek v3 and DeepSeek Coder strongly rival closed-source counterparts in LaTeX tasks; and formatting and package errors are unexpectedly prevalent, suggesting a lack of diverse LaTeX examples in the training datasets of most LLMs. Our dataset, code, and model evaluations are available at https://github.com/knowledge-verse-ai/TeXpert.
Retrieval-Augmented Generation (RAG) has become essential for large-scale code generation, grounding predictions in external code corpora to improve actuality. However, a critical yet underexplored aspect of RAG pipelines is chunking -- the process of dividing documents into retrievable units. Existing line-based chunking heuristics often break semantic structures, splitting functions or merging unrelated code, which can degrade generation quality. We propose chunking via Abstract Syntax Trees (\ourwork), a structure-aware method that recursively breaks large AST nodes into smaller chunks and merges sibling nodes while respecting size limits. This approach generates self-contained, semantically coherent units across programming languages and tasks, improving performance on diverse code generation tasks, e.g., boosting Recall@5 by 4.3 points on RepoEval retrieval and Pass@1 by 2.67 points on SWE-bench generation. Our work highlights the importance of structure-aware chunking for scaling retrieval-enhanced code intelligence.
Code generation is a core capability of large language models (LLMs), yet mainstream benchmarks (e.g., APPs and LiveCodeBench) contain questions with medium-level difficulty and pose no challenge to advanced LLMs. To better reflected the advanced reasoning and code generation ability, We introduce Humanity's Last Code Exam (HLCE), comprising 235 most challenging problems from the International Collegiate Programming Contest (ICPC World Finals) and the International Olympiad in Informatics (IOI) spanning 2010 - 2024. As part of HLCE, we design a harmonized online-offline sandbox that guarantees fully reproducible evaluation. Through our comprehensive evaluation, we observe that even the strongest reasoning LLMs: o4-mini(high) and Gemini-2.5 Pro, achieve pass@1 rates of only 15.9% and 11.4%, respectively. Meanwhile, we propose a novel "self-recognition" task to measure LLMs' awareness of their own capabilities. Results indicate that LLMs' self-recognition abilities are not proportionally correlated with their code generation performance. Finally, our empirical validation of test-time scaling laws reveals that current advanced LLMs have substantial room for improvement on complex programming tasks. We expect HLCE to become a milestone challenge for code generation and to catalyze advances in high-performance reasoning and human-AI collaborative programming. Our code and dataset are also public available(https://github.com/Humanity-s-Last-Code-Exam/HLCE).
Diffusion large language models (dLLMs) are compelling alternatives to autoregressive (AR) models because their denoising models operate over the entire sequence. The global planning and iterative refinement features of dLLMs are particularly useful for code generation. However, current training and inference mechanisms for dLLMs in coding are still under-explored. To demystify the decoding behavior of dLLMs and unlock their potential for coding, we systematically investigate their denoising processes and reinforcement learning (RL) methods. We train a 7B dLLM, \textbf{DiffuCoder}, on 130B tokens of code. Using this model as a testbed, we analyze its decoding behavior, revealing how it differs from that of AR models: (1) dLLMs can decide how causal their generation should be without relying on semi-AR decoding, and (2) increasing the sampling temperature diversifies not only token choices but also their generation order. This diversity creates a rich search space for RL rollouts. For RL training, to reduce the variance of token log-likelihood estimates and maintain training efficiency, we propose \textbf{coupled-GRPO}, a novel sampling scheme that constructs complementary mask noise for completions used in training. In our experiments, coupled-GRPO significantly improves DiffuCoder's performance on code generation benchmarks (+4.4\% on EvalPlus) and reduces reliance on AR causal during decoding. Our work provides deeper insight into the machinery of dLLM generation and offers an effective, diffusion-native RL training framework. https://github.com/apple/ml-diffucoder.
Large Language Models (LLMs) exhibit remarkable code generation capabilities but falter when adapting to frequent updates in external library APIs. This critical limitation, stemming from reliance on outdated API knowledge from their training data, even with access to current documentation, impedes reliable code generation in dynamic environments. To tackle this issue, we propose ReCode (rule-based Reinforcement learning for Code Update), a novel framework that mimics human programmer adaptation to API changes. Specifically, we construct a dataset of approximately 2,000 data entries to train the LLMs to perform version migration based on updated information. Then, we introduce a modified string similarity metric for code evaluation as the reward for reinforcement learning. Our experiments demonstrate that ReCode substantially boosts LLMs' code generation performance in dynamic API scenarios, especially on the unseen CodeUpdateArena task. Crucially, compared to supervised fine-tuning, ReCode has less impact on LLMs' general code generation abilities. We apply ReCode on various LLMs and reinforcement learning algorithms (GRPO and DAPO), all achieving consistent improvements. Notably, after training, Qwen2.5-Coder-7B outperforms that of the 32B parameter code instruction-tuned model and the reasoning model with the same architecture. Code is available at https://github.com/zjunlp/ReCode.
Can we leverage LLMs to model the process of discovering novel language model (LM) architectures? Inspired by real research, we propose a multi-agent LLM approach that simulates the conventional stages of research, from ideation and literature search (proposal stage) to design implementation (code generation), generative pre-training, and downstream evaluation (verification). Using ideas from scaling laws, our system, Genesys, employs a Ladder of Scales approach; new designs are proposed, adversarially reviewed, implemented, and selectively verified at increasingly larger model scales (14M$\sim$350M parameters) with a narrowing budget (the number of models we can train at each scale). To help make discovery efficient and factorizable, Genesys uses a novel genetic programming backbone, which we show has empirical advantages over commonly used direct prompt generation workflows (e.g., $\sim$86\% percentage point improvement in successful design generation, a key bottleneck). We report experiments involving 1,162 newly discovered designs (1,062 fully verified through pre-training) and find the best designs to be highly competitive with known architectures (e.g., outperform GPT2, Mamba2, etc., on 6/9 common benchmarks). We couple these results with comprehensive system-level ablations and formal results, which give broader insights into the design of effective autonomous discovery systems.
Recent advances in large language models (LLMs), particularly those enhanced through reinforced post-training, have demonstrated impressive reasoning capabilities, as exemplified by models such as OpenAI o1 and DeepSeek-R1. However, these capabilities are predominantly benchmarked on domains like mathematical problem solving and code generation -- leaving open the question of whether such reasoning skills generalize to complex, real-world scenarios. In this paper, we introduce LocationReasoner, a benchmark designed to evaluate LLMs' reasoning abilities in the context of real-world site selection, where models must identify feasible locations by reasoning over diverse and complicated spatial, environmental, and logistical constraints. The benchmark comprises over 300 carefully crafted queries of varying difficulty levels, supported by a sandbox environment with in-house tools for constraint-based location search. Extensive evaluations reveal that state-of-the-art reasoning models offer limited improvement over their non-reasoning predecessors in real-world contexts, with even the latest OpenAI o4 model failing on 30% of site selection tasks. Moreover, agentic strategies such as ReAct and Reflexion often suffer from over-reasoning, leading to worse outcomes than direct code-generation prompting. With key limitations of LLMs in holistic and non-linear reasoning highlighted, we release LocationReasoner to foster the development of LLMs and agents capable of robust, grounded reasoning in real-world decision-making tasks. Codes and data for our benchmark are available at https://github.com/miho-koda/LocationReasoner.
Tokenization is used almost universally by modern language models, enabling efficient text representation using multi-byte or multi-character tokens. However, prior work has shown that tokenization can introduce distortion into the model's generations. For example, users are often advised not to end their prompts with a space because it prevents the model from including the space as part of the next token. This Prompt Boundary Problem (PBP) also arises in languages such as Chinese and in code generation, where tokens often do not line up with syntactic boundaries. Additionally mismatching tokenizers often hinder model composition and interoperability. For example, it is not possible to directly ensemble models with different tokenizers due to their mismatching vocabularies. To address these issues, we present an inference-time method to convert any autoregressive LM with a BPE tokenizer into a character-level or byte-level LM, without changing its generative distribution at the text level. Our method efficient solves the PBP and is also able to unify the vocabularies of language models with different tokenizers, allowing one to ensemble LMs with different tokenizers at inference time as well as transfer the post-training from one model to another using proxy-tuning. We demonstrate in experiments that the ensemble and proxy-tuned models outperform their constituents on downstream evals.
We present the Comprehensive Verilog Design Problems (CVDP) benchmark, a new dataset and infrastructure to advance LLM and agent research in hardware design and verification. CVDP includes 783 problems across 13 task categories, covering RTL generation, verification, debugging, specification alignment, and technical Q&A authored by experienced hardware engineers. Problems are offered in both non-agentic and agentic formats. The benchmark introduces more realistic and challenging contexts than prior work, with state-of-the-art models achieving no more than 34% pass@1 on code generation. Agentic tasks$\unicode{x2013}$especially those involving RTL reuse and verification$\unicode{x2013}$are particularly difficult. Evaluation uses open-source tools and model scoring infrastructure, with comprehension tasks assessed via BLEU and LLM-based judging. CVDP reveals substantial gaps in current model capabilities, underscoring the need for continued research toward robust, real-world hardware design automation.
LLM-assisted hardware verification is gaining substantial attention due to its potential to significantly reduce the cost and effort of crafting effective testbenches. It also serves as a critical enabler for LLM-aided end-to-end hardware language design. However, existing current LLMs often struggle with Register Transfer Level (RTL) code generation, resulting in testbenches that exhibit functional errors in Hardware Description Languages (HDL) logic. Motivated by the strong performance of LLMs in Python code generation under inference-time sampling strategies, and their promising capabilities as judge agents, we propose PRO-V a fully program generation multi-agent system for robust RTL verification. Pro-V incorporates an efficient best-of-n iterative sampling strategy to enhance the correctness of generated testbenches. Moreover, it introduces an LLM-as-a-judge aid validation framework featuring an automated prompt generation pipeline. By converting rule-based static analysis from the compiler into natural language through in-context learning, this pipeline enables LLMs to assist the compiler in determining whether verification failures stem from errors in the RTL design or the testbench. PRO-V attains a verification accuracy of 87.17% on golden RTL implementations and 76.28% on RTL mutants. Our code is open-sourced at https://github.com/stable-lab/Pro-V.
Finetuning is a critical step for adapting large language models (LLMs) to domain-specific downstream tasks. To mitigate the substantial computational and memory costs of full-model fine-tuning, Parameter-Efficient Finetuning (PEFT) methods have been proposed to update only a small subset of model parameters. However, performance gaps between PEFT approaches and full-model fine-tuning still exist. In this work, we present DiaBlo, a simple yet effective PEFT approach that updates only the diagonal blocks of selected model weight matrices. Unlike Low Rank Adaptation (LoRA) and its variants, DiaBlo eliminates the need for low rank matrix products, thereby avoiding the reliance on auxiliary initialization schemes or customized optimization strategies to improve convergence. This design leads to stable and robust convergence while maintaining comparable memory efficiency and training speed to LoRA. We conduct extensive experiments across a range of tasks, including commonsense reasoning, arithmetic reasoning, code generation, and safety alignment, to evaluate the effectiveness and efficiency of DiaBlo. Across these benchmarks, DiaBlo demonstrates strong and consistent performance while maintaining high memory efficiency and fast finetuning speed. Codes are available at https://github.com/ziyangjoy/DiaBlo.
The advent of Large Language Models (LLMs) has spurred the development of coding agents for real-world code generation. As a widely used benchmark for evaluating the code generation capabilities of these agents, SWE-Bench uses real-world problems based on GitHub issues and their corresponding pull requests. However, the manually written test cases included in these pull requests are often insufficient, allowing generated patches to pass the tests without resolving the underlying issue. To address this challenge, we introduce UTGenerator, an LLM-driven test case generator that automatically analyzes codebases and dependencies to generate test cases for real-world Python projects. Building on UTGenerator, we propose UTBoost, a comprehensive framework for test case augmentation. In our evaluation, we identified 36 task instances with insufficient test cases and uncovered 345 erroneous patches incorrectly labeled as passed in the original SWE Bench. These corrections, impacting 40.9% of SWE-Bench Lite and 24.4% of SWE-Bench Verified leaderboard entries, yield 18 and 11 ranking changes, respectively.