This work proposes PatchNet, an automated tool based on hierarchical deep learning for classifying patches by extracting features from commit messages and code changes. PatchNet contains a deep hierarchical structure that mirrors the hierarchical and sequential structure of a code change, differentiating it from the existing deep learning models on source code. PatchNet provides several options allowing users to select parameters for the training process. The tool has been validated in the context of automatic identification of stable-relevant patches in the Linux kernel and is potentially applicable to automate other software engineering tasks that can be formulated as patch classification problems. A video demonstrating PatchNet is available at https://goo.gl/CZjG6X. The PatchNet implementation is available at https://github.com/hvdthong/PatchNetTool.
This work generalizes graph neural networks (GNNs) beyond those based on the Weisfeiler-Lehman (WL) algorithm, graph Laplacians, and diffusions. Our approach, denoted Relational Pooling (RP), draws from the theory of finite partial exchangeability to provide a framework with maximal representation power for graphs. RP can work with existing graph representation models and, somewhat counterintuitively, can make them even more powerful than the original WL isomorphism test. Additionally, RP allows architectures like Recurrent Neural Networks and Convolutional Neural Networks to be used in a theoretically sound approach for graph classification. We demonstrate improved performance of RP-based graph representations over state-of-the-art methods on a number of tasks.
We introduce a probabilistic robustness measure for Bayesian Neural Networks (BNNs), defined as the probability that, given a test point, there exists a point within a bounded set such that the BNN prediction differs between the two. Such a measure can be used, for instance, to quantify the probability of the existence of adversarial examples. Building on statistical verification techniques for probabilistic models, we develop a framework that allows us to estimate probabilistic robustness for a BNN with statistical guarantees, i.e., with a priori error and confidence bounds. We provide experimental comparison for several approximate BNN inference techniques on image classification tasks associated to MNIST and a two-class subset of the GTSRB dataset. Our results enable quantification of uncertainty of BNN predictions in adversarial settings.
Clustering, like covariate selection for classification, is an important step to compress and interpret the data. However, clustering of covariates is often performed independently of the classification step, which can lead to undesirable clustering results that harm interpretability and compression rate. Therefore, we propose a method that can cluster covariates while taking into account class label information of samples. We formulate the problem as a convex optimization problem which uses both, a-priori similarity information between covariates, and information from class-labeled samples. Like ordinary convex clustering [Chi and Lange, 2015], the proposed method offers a unique global minima making it insensitive to initialization. In order to solve the convex problem, we propose a specialized alternating direction method of multipliers (ADMM), which scales up to several thousands of variables. Furthermore, in order to circumvent computationally expensive cross-validation, we propose a model selection criterion based on approximating the marginal likelihood. Experiments on synthetic and real data confirm the usefulness of the proposed clustering method and the selection criterion.
In this paper, a novel architecture of Recurrent Neural Network (RNN) is designed and experimented. The proposed RNN adopts a computational memory based on the concept of stigmergy. The basic principle of a Stigmergic Memory (SM) is that the activity of deposit/removal of a quantity in the SM stimulates the next activities of deposit/removal. Accordingly, subsequent SM activities tend to reinforce/weaken each other, generating a coherent coordination between the SM activities and the input temporal stimulus. We show that, in a problem of supervised classification, the SM encodes the temporal input in an emergent representational model, by coordinating the deposit, removal and classification activities. This study lays down a basic framework for the derivation of a SM-RNN. A formal ontology of SM is discussed, and the SM-RNN architecture is detailed. To appreciate the computational power of an SM-RNN, comparative NNs have been selected and trained to solve the MNIST handwritten digits recognition benchmark in its two variants: spatial (sequences of bitmap rows) and temporal (sequences of pen strokes).
Classifiers label data as belonging to one of a set of groups based on input features. It is challenging to obtain accurate classification performance when the feature distributions in the different classes are complex, with nonlinear, overlapping and intersecting supports. This is particularly true when training data are limited. To address this problem, this article proposes a new type of classifier based on obtaining a local approximation to the support of the data within each class in a neighborhood of the feature to be classified, and assigning the feature to the class having the closest support. This general algorithm is referred to as LOcal Manifold Approximation (LOMA) classification. As a simple and theoretically supported special case having excellent performance in a broad variety of examples, we use spheres for local approximation, obtaining a SPherical Approximation (SPA) classifier. We illustrate substantial gains for SPA over competitors on a variety of challenging simulated and real data examples.
Plant phenology studies rely on long-term monitoring of life cycles of plants. High-resolution unmanned aerial vehicles (UAVs) and near-surface technologies have been used for plant monitoring, demanding the creation of methods capable of locating and identifying plant species through time and space. However, this is a challenging task given the high volume of data, the constant data missing from temporal dataset, the heterogeneity of temporal profiles, the variety of plant visual patterns, and the unclear definition of individuals' boundaries in plant communities. In this letter, we propose a novel method, suitable for phenological monitoring, based on Convolutional Networks (ConvNets) to perform spatio-temporal vegetation pixel-classification on high resolution images. We conducted a systematic evaluation using high-resolution vegetation image datasets associated with the Brazilian Cerrado biome. Experimental results show that the proposed approach is effective, overcoming other spatio-temporal pixel-classification strategies.
Letting a deep network be aware of the quality of its own predictions is an interesting yet important problem. In the task of instance segmentation, the confidence of instance classification is used as mask quality score in most instance segmentation frameworks. However, the mask quality, quantified as the IoU between the instance mask and its ground truth, is usually not well correlated with classification score. In this paper, we study this problem and propose Mask Scoring R-CNN which contains a network block to learn the quality of the predicted instance masks. The proposed network block takes the instance feature and the corresponding predicted mask together to regress the mask IoU. The mask scoring strategy calibrates the misalignment between mask quality and mask score, and improves instance segmentation performance by prioritizing more accurate mask predictions during COCO AP evaluation. By extensive evaluations on the COCO dataset, Mask Scoring R-CNN brings consistent and noticeable gain with different models, and outperforms the state-of-the-art Mask R-CNN. We hope our simple and effective approach will provide a new direction for improving instance segmentation. The source code of our method is available at \url{https://github.com/zjhuang22/maskscoring_rcnn}.
In this paper, we propose a solution which uses state-of-the-art techniques in Deep Learning to tackle the problem of Bengali Handwritten Character Recognition ( HCR ). Our method uses lesser iterations to train than most other comparable methods. We employ Transfer Learning on ResNet 50, a state-of-the-art deep Convolutional Neural Network Model, pretrained on ImageNet dataset. We also use other techniques like a modified version of One Cycle Policy, varying the input image sizes etc. to ensure that our training occurs fast. We use the BanglaLekha-Isolated Dataset for evaluation of our technique which consists of 84 classes (50 Basic, 10 Numerals and 24 Compound Characters). We are able to achieve 96.12% accuracy in just 47 epochs on BanglaLekha-Isolated dataset. When comparing our method with that of other researchers, considering number of classes and without using Ensemble Learning, the proposed solution achieves state of the art result for Handwritten Bengali Character Recognition. Code and weight files are available at https://github.com/swagato-c/bangla-hwcr-present.
The computational demands of computer vision tasks based on state-of-the-art Convolutional Neural Network (CNN) image classification far exceed the energy budgets of mobile devices. This paper proposes FixyNN, which consists of a fixed-weight feature extractor that generates ubiquitous CNN features, and a conventional programmable CNN accelerator which processes a dataset-specific CNN. Image classification models for FixyNN are trained end-to-end via transfer learning, with the common feature extractor representing the transfered part, and the programmable part being learnt on the target dataset. Experimental results demonstrate FixyNN hardware can achieve very high energy efficiencies up to 26.6 TOPS/W ($4.81 \times$ better than iso-area programmable accelerator). Over a suite of six datasets we trained models via transfer learning with an accuracy loss of $<1\%$ resulting in up to 11.2 TOPS/W - nearly $2 \times$ more efficient than a conventional programmable CNN accelerator of the same area.
We build new test sets for the CIFAR-10 and ImageNet datasets. Both benchmarks have been the focus of intense research for almost a decade, raising the danger of overfitting to excessively re-used test sets. By closely following the original dataset creation processes, we test to what extent current classification models generalize to new data. We evaluate a broad range of models and find accuracy drops of 3% - 15% on CIFAR-10 and 11% - 14% on ImageNet. However, accuracy gains on the original test sets translate to larger gains on the new test sets. Our results suggest that the accuracy drops are not caused by adaptivity, but by the models' inability to generalize to slightly "harder" images than those found in the original test sets.
This paper proposes a new classification model called logistic circuits. On MNIST and Fashion datasets, our learning algorithm outperforms neural networks that have an order of magnitude more parameters. Yet, logistic circuits have a distinct origin in symbolic AI, forming a discriminative counterpart to probabilistic-logical circuits such as ACs, SPNs, and PSDDs. We show that parameter learning for logistic circuits is convex optimization, and that a simple local search algorithm can induce strong model structures from data.
Long Short Term Memory Fully Convolutional Neural Networks (LSTM-FCN) and Attention LSTM-FCN (ALSTM-FCN) have shown to achieve state-of-the-art performance on the task of classifying time series signals on the old University of California-Riverside (UCR) time series repository. However, there has been no study on why LSTM-FCN and ALSTM-FCN perform well. In this paper, we perform a series of ablation tests (3627 experiments) on LSTM-FCN and ALSTM-FCN to provide a better understanding of the model and each of its sub-module. Results from the ablation tests on ALSTM-FCN and LSTM-FCN show that the LSTM and the FCN blocks perform better when applied in a conjoined manner. Two z-normalizing techniques, z-normalizing each sample independently and z-normalizing the whole dataset, are compared using a Wilcoxson signed-rank test to show a statistical difference in performance. In addition, we provide an understanding of the impact dimension shuffle has on LSTM-FCN by comparing its performance with LSTM-FCN when no dimension shuffle is applied. Finally, we demonstrate the performance of the LSTM-FCN when the LSTM block is replaced by a GRU, basic RNN, and Dense Block.
Time series classification models have been garnering significant importance in the research community. However, not much research has been done on generating adversarial samples for these models. These adversarial samples can become a security concern. In this paper, we propose utilizing an adversarial transformation network (ATN) on a distilled model to attack various time series classification models. The proposed attack on the classification model utilizes a distilled model as a surrogate that mimics the behavior of the attacked classical time series classification models. Our proposed methodology is applied onto 1-Nearest Neighbor Dynamic Time Warping (1-NN ) DTW, a Fully Connected Network and a Fully Convolutional Network (FCN), all of which are trained on 42 University of California Riverside (UCR) datasets. In this paper, we show both models were susceptible to attacks on all 42 datasets. To the best of our knowledge, such an attack on time series classification models has never been done before. Finally, we recommend future researchers that develop time series classification models to incorporating adversarial data samples into their training data sets to improve resilience on adversarial samples and to consider model robustness as an evaluative metric.
Graph representation learning resurges as a trending research subject owing to the widespread use of deep learning for Euclidean data, which inspire various creative designs of neural networks in the non-Euclidean domain, particularly graphs. With the success of these graph neural networks (GNN) in the static setting, we approach further practical scenarios where the graph dynamically evolves. Existing approaches typically resort to node embeddings and use a recurrent neural network (RNN, broadly speaking) to regulate the embeddings and learn the temporal dynamics. These methods require the knowledge of a node in the full time span (including both training and testing) and are less applicable to the frequent change of the node set. In some extreme scenarios, the node sets at different time steps may completely differ. To resolve this challenge, we propose EvolveGCN, which adapts the graph convolutional network (GCN) model along the temporal dimension without resorting to node embeddings. The proposed approach captures the dynamism of the graph sequence through using an RNN to evolve the GCN parameters. Two architectures are considered for the parameter evolution. We evaluate the proposed approach on tasks including link prediction, edge classification, and node classification. The experimental results indicate a generally higher performance of EvolveGCN compared with related approaches. The code is available at \url{https://github.com/IBM/EvolveGCN}.
This paper describes our system submitted to SemEval 2019 Task 7: RumourEval 2019: Determining Rumour Veracity and Support for Rumours, Subtask A (Gorrell et al., 2019). The challenge focused on classifying whether posts from Twitter and Reddit support, deny, query, or comment a hidden rumour, truthfulness of which is the topic of an underlying discussion thread. We formulate the problem as a stance classification, determining the rumour stance of a post with respect to the previous thread post and the source thread post. The recent BERT architecture was employed to build an end-to-end system which has reached the F1 score of 61.67% on the provided test data. It finished at the 2nd place in the competition, without any hand-crafted features, only 0.2% behind the winner.
A growing number of state-of-the-art transfer learning methods employ language models pretrained on large generic corpora. In this paper we present a conceptually simple and effective transfer learning approach that addresses the problem of catastrophic forgetting. Specifically, we combine the task-specific optimization function with an auxiliary language model objective, which is adjusted during the training process. This preserves language regularities captured by language models, while enabling sufficient adaptation for solving the target task. Our method does not require pretraining or finetuning separate components of the network and we train our models end-to-end in a single step. We present results on a variety of challenging affective and text classification tasks, surpassing well established transfer learning methods with greater level of complexity.
One of the founding paradigms of machine learning is that a small number of variables is often sufficient to describe high-dimensional data. The minimum number of variables required is called the intrinsic dimension (ID) of the data. Contrary to common intuition, there are cases where the ID varies within the same data set. This fact has been highlighted in technical discussions, but seldom exploited to analyze large data sets and obtain insight into their structure. Here we develop a robust approach to discriminate regions with different local IDs and segment the points accordingly. Our approach is computationally efficient and can be proficiently used even on large data sets. We find that many real-world data sets contain regions with widely heterogeneous dimensions. These regions host points differing in core properties: folded vs unfolded configurations in a protein molecular dynamics trajectory, active vs non-active regions in brain imaging data, and firms with different financial risk in company balance sheets. A simple topological feature, the local ID, is thus sufficient to achieve an unsupervised segmentation of high-dimensional data, complementary to the one given by clustering algorithms.
With the rapid development in deep learning, deep neural networks have been widely adopted in many real-life natural language applications. Under deep neural networks, a pre-defined vocabulary is required to vectorize text inputs. The canonical approach to select pre-defined vocabulary is based on the word frequency, where a threshold is selected to cut off the long tail distribution. However, we observed that such simple approach could easily lead to under-sized vocabulary or over-sized vocabulary issues. Therefore, we are interested in understanding how the end-task classification accuracy is related to the vocabulary size and what is the minimum required vocabulary size to achieve a specific performance. In this paper, we provide a more sophisticated variational vocabulary dropout (VVD) based on variational dropout to perform vocabulary selection, which can intelligently select the subset of the vocabulary to achieve the required performance. To evaluate different algorithms on the newly proposed vocabulary selection problem, we propose two new metrics: Area Under Accuracy-Vocab Curve and Vocab Size under X\% Accuracy Drop. Through extensive experiments on various NLP classification tasks, our variational framework is shown to significantly outperform the frequency-based and other selection baselines on these metrics.
Most deep learning classification studies assume clean data. However, when dealing with the real world data, we encounter three problems such as 1) missing data, 2) class imbalance, and 3) missing label problems. These problems undermine the performance of a classifier. Various preprocessing techniques have been proposed to mitigate one of these problems, but an algorithm that assumes and resolves all three problems together has not been proposed yet. In this paper, we propose HexaGAN, a generative adversarial network framework that shows promising classification performance for all three problems. We interpret the three problems from a single perspective to solve them jointly. To enable this, the framework consists of six components, which interact with each other. We also devise novel loss functions corresponding to the architecture. The designed loss functions allow us to achieve state-of-the-art imputation performance, with up to a 14% improvement, and to generate high-quality class-conditional data. We evaluate the classification performance (F1-score) of the proposed method with 20% missingness and confirm up to a 5% improvement in comparison with the performance of combinations of state-of-the-art methods.