In this work we examine the classification accuracy and robustness of a state-of-the-art semi-supervised learning (SSL) algorithm applied to the morphological classification of radio galaxies. We test if SSL with fewer labels can achieve test accuracies comparable to the supervised state-of-the-art and whether this holds when incorporating previously unseen data. We find that for the radio galaxy classification problem considered, SSL provides additional regularisation and outperforms the baseline test accuracy. However, in contrast to model performance metrics reported on computer science benchmarking data-sets, we find that improvement is limited to a narrow range of label volumes, with performance falling off rapidly at low label volumes. Additionally, we show that SSL does not improve model calibration, regardless of whether classification is improved. Moreover, we find that when different underlying catalogues drawn from the same radio survey are used to provide the labelled and unlabelled data-sets required for SSL, a significant drop in classification performance is observered, highlighting the difficulty of applying SSL techniques under dataset shift. We show that a class-imbalanced unlabelled data pool negatively affects performance through prior probability shift, which we suggest may explain this performance drop, and that using the Frechet Distance between labelled and unlabelled data-sets as a measure of data-set shift can provide a prediction of model performance, but that for typical radio galaxy data-sets with labelled sample volumes of O(1000), the sample variance associated with this technique is high and the technique is in general not sufficiently robust to replace a train-test cycle.
This paper studies node classification in the inductive setting, i.e., aiming to learn a model on labeled training graphs and generalize it to infer node labels on unlabeled test graphs. This problem has been extensively studied with graph neural networks (GNNs) by learning effective node representations, as well as traditional structured prediction methods for modeling the structured output of node labels, e.g., conditional random fields (CRFs). In this paper, we present a new approach called the Structured Proxy Network (SPN), which combines the advantages of both worlds. SPN defines flexible potential functions of CRFs with GNNs. However, learning such a model is nontrivial as it involves optimizing a maximin game with high-cost inference. Inspired by the underlying connection between joint and marginal distributions defined by Markov networks, we propose to solve an approximate version of the optimization problem as a proxy, which yields a near-optimal solution, making learning more efficient. Extensive experiments on two settings show that our approach outperforms many competitive baselines.
In text classification tasks, useful information is encoded in the label names. Label semantic aware systems have leveraged this information for improved text classification performance during fine-tuning and prediction. However, use of label-semantics during pre-training has not been extensively explored. We therefore propose Label Semantic Aware Pre-training (LSAP) to improve the generalization and data efficiency of text classification systems. LSAP incorporates label semantics into pre-trained generative models (T5 in our case) by performing secondary pre-training on labeled sentences from a variety of domains. As domain-general pre-training requires large amounts of data, we develop a filtering and labeling pipeline to automatically create sentence-label pairs from unlabeled text. We perform experiments on intent (ATIS, Snips, TOPv2) and topic classification (AG News, Yahoo! Answers). LSAP obtains significant accuracy improvements over state-of-the-art models for few-shot text classification while maintaining performance comparable to state of the art in high-resource settings.
The recent literature in text classification is biased towards short text sequences (e.g., sentences or paragraphs). In real-world applications, multi-page multi-paragraph documents are common and they cannot be efficiently encoded by vanilla Transformer-based models. We compare different Transformer-based Long Document Classification (TrLDC) approaches that aim to mitigate the computational overhead of vanilla transformers to encode much longer text, namely sparse attention and hierarchical encoding methods. We examine several aspects of sparse attention (e.g., size of local attention window, use of global attention) and hierarchical (e.g., document splitting strategy) transformers on four document classification datasets covering different domains. We observe a clear benefit from being able to process longer text, and, based on our results, we derive practical advice of applying Transformer-based models on long document classification tasks.
Text-based communication is highly favoured as a communication method, especially in business environments. As a result, it is often abused by sending malicious messages, e.g., spam emails, to deceive users into relaying personal information, including online accounts credentials or banking details. For this reason, many machine learning methods for text classification have been proposed and incorporated into the services of most email providers. However, optimising text classification algorithms and finding the right tradeoff on their aggressiveness is still a major research problem. We present an updated survey of 12 machine learning text classifiers applied to a public spam corpus. A new pipeline is proposed to optimise hyperparameter selection and improve the models' performance by applying specific methods (based on natural language processing) in the preprocessing stage. Our study aims to provide a new methodology to investigate and optimise the effect of different feature sizes and hyperparameters in machine learning classifiers that are widely used in text classification problems. The classifiers are tested and evaluated on different metrics including F-score (accuracy), precision, recall, and run time. By analysing all these aspects, we show how the proposed pipeline can be used to achieve a good accuracy towards spam filtering on the Enron dataset, a widely used public email corpus. Statistical tests and explainability techniques are applied to provide a robust analysis of the proposed pipeline and interpret the classification outcomes of the 12 machine learning models, also identifying words that drive the classification results. Our analysis shows that it is possible to identify an effective machine learning model to classify the Enron dataset with an F-score of 94%.
Dialog systems must be capable of incorporating new skills via updates over time in order to reflect new use cases or deployment scenarios. Similarly, developers of such ML-driven systems need to be able to add new training data to an already-existing dataset to support these new skills. In intent classification systems, problems can arise if training data for a new skill's intent overlaps semantically with an already-existing intent. We call such cases collisions. This paper introduces the task of intent collision detection between multiple datasets for the purposes of growing a system's skillset. We introduce several methods for detecting collisions, and evaluate our methods on real datasets that exhibit collisions. To highlight the need for intent collision detection, we show that model performance suffers if new data is added in such a way that does not arbitrate colliding intents. Finally, we use collision detection to construct and benchmark a new dataset, Redwood, which is composed of 451 ntent categories from 13 original intent classification datasets, making it the largest publicly available intent classification benchmark.
Deep learning models have shown a great effectiveness in recognition of findings in medical images. However, they cannot handle the ever-changing clinical environment, bringing newly annotated medical data from different sources. To exploit the incoming streams of data, these models would benefit largely from sequentially learning from new samples, without forgetting the previously obtained knowledge. In this paper we introduce LifeLonger, a benchmark for continual disease classification on the MedMNIST collection, by applying existing state-of-the-art continual learning methods. In particular, we consider three continual learning scenarios, namely, task and class incremental learning and the newly defined cross-domain incremental learning. Task and class incremental learning of diseases address the issue of classifying new samples without re-training the models from scratch, while cross-domain incremental learning addresses the issue of dealing with datasets originating from different institutions while retaining the previously obtained knowledge. We perform a thorough analysis of the performance and examine how the well-known challenges of continual learning, such as the catastrophic forgetting exhibit themselves in this setting. The encouraging results demonstrate that continual learning has a major potential to advance disease classification and to produce a more robust and efficient learning framework for clinical settings. The code repository, data partitions and baseline results for the complete benchmark will be made publicly available.
Traditionally, deep learning methods for breast cancer classification perform a single-view analysis. However, radiologists simultaneously analyze all four views that compose a mammography exam, owing to the correlations contained in mammography views, which present crucial information for identifying tumors. In light of this, some studies have started to propose multi-view methods. Nevertheless, in such existing architectures, mammogram views are processed as independent images by separate convolutional branches, thus losing correlations among them. To overcome such limitations, in this paper, we propose a methodological approach for multi-view breast cancer classification based on parameterized hypercomplex neural networks. Thanks to hypercomplex algebra properties, our networks are able to model, and thus leverage, existing correlations between the different views that comprise a mammogram, thus mimicking the reading process performed by clinicians. This happens because hypercomplex networks capture both global properties, as standard neural models, as well as local relations, i.e., inter-view correlations, which real-valued networks fail at modeling. We define architectures designed to process two-view exams, namely PHResNets, and four-view exams, i.e., PHYSEnet and PHYBOnet. Through an extensive experimental evaluation conducted with publicly available datasets, we demonstrate that our proposed models clearly outperform real-valued counterparts and state-of-the-art methods, proving that breast cancer classification benefits from the proposed multi-view architectures. We also assess the method generalizability beyond mammogram analysis by considering different benchmarks, as well as a finer-scaled task such as segmentation. Full code and pretrained models for complete reproducibility of our experiments are freely available at https://github.com/ispamm/PHBreast.
While machine learning is currently transforming the field of histopathology, the domain lacks a comprehensive evaluation of state-of-the-art models based on essential but complementary quality requirements beyond a mere classification accuracy. In order to fill this gap, we developed a new methodology to extensively evaluate a wide range of classification models, including recent vision transformers, and convolutional neural networks such as: ConvNeXt, ResNet (BiT), Inception, ViT and Swin transformer, with and without supervised or self-supervised pretraining. We thoroughly tested the models on five widely used histopathology datasets containing whole slide images of breast, gastric, and colorectal cancer and developed a novel approach using an image-to-image translation model to assess the robustness of a cancer classification model against stain variations. Further, we extended existing interpretability methods to previously unstudied models and systematically reveal insights of the models' classifications strategies that can be transferred to future model architectures.
Few-shot classification is a challenging problem as only very few training examples are given for each new task. One of the effective research lines to address this challenge focuses on learning deep representations driven by a similarity measure between a query image and few support images of some class. Statistically, this amounts to measure the dependency of image features, viewed as random vectors in a high-dimensional embedding space. Previous methods either only use marginal distributions without considering joint distributions, suffering from limited representation capability, or are computationally expensive though harnessing joint distributions. In this paper, we propose a deep Brownian Distance Covariance (DeepBDC) method for few-shot classification. The central idea of DeepBDC is to learn image representations by measuring the discrepancy between joint characteristic functions of embedded features and product of the marginals. As the BDC metric is decoupled, we formulate it as a highly modular and efficient layer. Furthermore, we instantiate DeepBDC in two different few-shot classification frameworks. We make experiments on six standard few-shot image benchmarks, covering general object recognition, fine-grained categorization and cross-domain classification. Extensive evaluations show our DeepBDC significantly outperforms the counterparts, while establishing new state-of-the-art results. The source code is available at http://www.peihuali.org/DeepBDC
State-of-the-art methods in generative representation learning yield semantic disentanglement, but typically do not consider physical scene parameters, such as geometry, albedo, lighting, or camera. We posit that inverse rendering, a way to reverse the rendering process to recover scene parameters from an image, can also be used to learn physically disentangled representations of scenes without supervision. In this paper, we show the utility of inverse rendering in learning representations that yield improved accuracy on downstream clustering, linear classification, and segmentation tasks with the help of our novel Leave-One-Out, Cycle Contrastive loss (LOOCC), which improves disentanglement of scene parameters and robustness to out-of-distribution lighting and viewpoints. We perform a comparison of our method with other generative representation learning methods across a variety of downstream tasks, including face attribute classification, emotion recognition, identification, face segmentation, and car classification. Our physically disentangled representations yield higher accuracy than semantically disentangled alternatives across all tasks and by as much as 18%. We hope that this work will motivate future research in applying advances in inverse rendering and 3D understanding to representation learning.
We analyze various methods for single-label and multi-label text classification across well-known datasets, categorizing them into bag-of-words, sequence-based, graph-based, and hierarchical approaches. Despite the surge in methods like graph-based models, encoder-only pre-trained language models, notably BERT, remain state-of-the-art. However, recent findings suggest simpler models like logistic regression and trigram-based SVMs outperform newer techniques. While decoder-only generative language models show promise in learning with limited data, they lag behind encoder-only models in performance. We emphasize the superiority of discriminative language models like BERT over generative models for supervised tasks. Additionally, we highlight the literature's lack of robustness in method comparisons, particularly concerning basic hyperparameter optimizations like learning rate in fine-tuning encoder-only language models. Data availability: The source code is available at https://github.com/drndr/multilabel-text-clf All datasets used for our experiments are publicly available except the NYT dataset.
Deep neural networks (DNNs) designed for computer vision and natural language processing tasks cannot be directly applied to the radio frequency (RF) datasets. To address this challenge, we propose to convert the raw RF data to data types that are suitable for off-the-shelf DNNs by introducing a convolutional transform technique. In addition, we propose a simple 5-layer convolutional neural network architecture (CONV-5) that can operate with raw RF I/Q data without any transformation. Further, we put forward an RF dataset, referred to as RF1024, to facilitate future RF research. RF1024 consists of 8 different RF modulation classes with each class having 1000/200 training/test samples. Each sample of the RF1024 dataset contains 1024 complex I/Q values. Lastly, the experiments are performed on the RadioML2016 and RF1024 datasets to demonstrate the improved classification performance.
Learning complex time series forecasting models usually requires a large amount of data, as each model is trained from scratch for each task/data set. Leveraging learning experience with similar datasets is a well-established technique for classification problems called few-shot classification. However, existing approaches cannot be applied to time-series forecasting because i) multivariate time-series datasets have different channels and ii) forecasting is principally different from classification. In this paper we formalize the problem of few-shot forecasting of time-series with heterogeneous channels for the first time. Extending recent work on heterogeneous attributes in vector data, we develop a model composed of permutation-invariant deep set-blocks which incorporate a temporal embedding. We assemble the first meta-dataset of 40 multivariate time-series datasets and show through experiments that our model provides a good generalization, outperforming baselines carried over from simpler scenarios that either fail to learn across tasks or miss temporal information.
Recent state-of-the-art performances of Vision Transformers (ViT) in computer vision tasks demonstrate that a general-purpose architecture, which implements long-range self-attention, could replace the local feature learning operations of convolutional neural networks. In this paper, we extend ViTs to surfaces by reformulating the task of surface learning as a sequence-to-sequence learning problem, by proposing patching mechanisms for general surface meshes. Sequences of patches are then processed by a transformer encoder and used for classification or regression. We validate our method on a range of different biomedical surface domains and tasks: brain age prediction in the developing Human Connectome Project (dHCP), fluid intelligence prediction in the Human Connectome Project (HCP), and coronary artery calcium score classification using surfaces from the Scottish Computed Tomography of the Heart (SCOT-HEART) dataset, and investigate the impact of pretraining and data augmentation on model performance. Results suggest that Surface Vision Transformers (SiT) demonstrate consistent improvement over geometric deep learning methods for brain age and fluid intelligence prediction and achieve comparable performance on calcium score classification to standard metrics used in clinical practice. Furthermore, analysis of transformer attention maps offers clear and individualised predictions of the features driving each task. Code is available on Github: https://github.com/metrics-lab/surface-vision-transformers
Currently available benchmarks for few-shot learning (machine learning with few training examples) are limited in the domains they cover, primarily focusing on image classification. This work aims to alleviate this reliance on image-based benchmarks by offering the first comprehensive, public and fully reproducible audio based alternative, covering a variety of sound domains and experimental settings. We compare the few-shot classification performance of a variety of techniques on seven audio datasets (spanning environmental sounds to human-speech). Extending this, we carry out in-depth analyses of joint training (where all datasets are used during training) and cross-dataset adaptation protocols, establishing the possibility of a generalised audio few-shot classification algorithm. Our experimentation shows gradient-based meta-learning methods such as MAML and Meta-Curvature consistently outperform both metric and baseline methods. We also demonstrate that the joint training routine helps overall generalisation for the environmental sound databases included, as well as being a somewhat-effective method of tackling the cross-dataset/domain setting.
Most modern video recognition models are designed to operate on short video clips (e.g., 5-10s in length). Thus, it is challenging to apply such models to long movie understanding tasks, which typically require sophisticated long-range temporal reasoning. The recently introduced video transformers partially address this issue by using long-range temporal self-attention. However, due to the quadratic cost of self-attention, such models are often costly and impractical to use. Instead, we propose ViS4mer, an efficient long-range video model that combines the strengths of self-attention and the recently introduced structured state-space sequence (S4) layer. Our model uses a standard Transformer encoder for short-range spatiotemporal feature extraction, and a multi-scale temporal S4 decoder for subsequent long-range temporal reasoning. By progressively reducing the spatiotemporal feature resolution and channel dimension at each decoder layer, ViS4mer learns complex long-range spatiotemporal dependencies in a video. Furthermore, ViS4mer is $2.63\times$ faster and requires $8\times$ less GPU memory than the corresponding pure self-attention-based model. Additionally, ViS4mer achieves state-of-the-art results in $6$ out of $9$ long-form movie video classification tasks on the Long Video Understanding (LVU) benchmark. Furthermore, we show that our approach successfully generalizes to other domains, achieving competitive results on the Breakfast and the COIN procedural activity datasets. The code is publicly available at: https://github.com/md-mohaiminul/ViS4mer.
Simplicial Embeddings (SEM) are representations learned through self-supervised learning (SSL), wherein a representation is projected into $L$ simplices of $V$ dimensions each using a softmax operation. This procedure conditions the representation onto a constrained space during pretraining and imparts an inductive bias for group sparsity. For downstream classification, we formally prove that the SEM representation leads to better generalization than an unnormalized representation. Furthermore, we empirically demonstrate that SSL methods trained with SEMs have improved generalization on natural image datasets such as CIFAR-100 and ImageNet. Finally, when used in a downstream classification task, we show that SEM features exhibit emergent semantic coherence where small groups of learned features are distinctly predictive of semantically-relevant classes.
A common practice in transfer learning is to initialize the downstream model weights by pre-training on a data-abundant upstream task. In object detection specifically, the feature backbone is typically initialized with Imagenet classifier weights and fine-tuned on the object detection task. Recent works show this is not strictly necessary under longer training regimes and provide recipes for training the backbone from scratch. We investigate the opposite direction of this end-to-end training trend: we show that an extreme form of knowledge preservation -- freezing the classifier-initialized backbone -- consistently improves many different detection models, and leads to considerable resource savings. We hypothesize and corroborate experimentally that the remaining detector components capacity and structure is a crucial factor in leveraging the frozen backbone. Immediate applications of our findings include performance improvements on hard cases like detection of long-tail object classes and computational and memory resource savings that contribute to making the field more accessible to researchers with access to fewer computational resources.
In this paper, we explore the use of GAN-based few-shot data augmentation as a method to improve few-shot classification performance. We perform an exploration into how a GAN can be fine-tuned for such a task (one of which is in a class-incremental manner), as well as a rigorous empirical investigation into how well these models can perform to improve few-shot classification. We identify issues related to the difficulty of training such generative models under a purely supervised regime with very few examples, as well as issues regarding the evaluation protocols of existing works. We also find that in this regime, classification accuracy is highly sensitive to how the classes of the dataset are randomly split. Therefore, we propose a semi-supervised fine-tuning approach as a more pragmatic way forward to address these problems.