To raise awareness of the huge impact Deep Learning (DL) has on the environment, several works have tried to estimate the energy consumption and carbon footprint of DL-based systems across their life cycle. However, the estimations for energy consumption in the training stage usually rely on assumptions that have not been thoroughly tested. This study aims to move past these assumptions by leveraging the relationship between energy consumption and two relevant design decisions in DL training; model architecture, and training environment. To investigate these relationships, we collect multiple metrics related to energy efficiency and model correctness during the models' training. Then, we outline the trade-offs between the measured energy consumption and the models' correctness regarding model architecture, and their relationship with the training environment. Finally, we study the training's power consumption behavior and propose four new energy estimation methods. Our results show that selecting the proper model architecture and training environment can reduce energy consumption dramatically (up to 80.72%) at the cost of negligible decreases in correctness. Also, we find evidence that GPUs should scale with the models' computational complexity for better energy efficiency. Furthermore, we prove that current energy estimation methods are unreliable and propose alternatives 2x more precise.
Automatic examination of thin-prep cytologic test (TCT) slides can assist pathologists in finding cervical abnormality for accurate and efficient cancer screening. Current solutions mostly need to localize suspicious cells and classify abnormality based on local patches, concerning the fact that whole slide images of TCT are extremely large. It thus requires many annotations of normal and abnormal cervical cells, to supervise the training of the patch-level classifier for promising performance. In this paper, we propose CellGAN to synthesize cytopathological images of various cervical cell types for augmenting patch-level cell classification. Built upon a lightweight backbone, CellGAN is equipped with a non-linear class mapping network to effectively incorporate cell type information into image generation. We also propose the Skip-layer Global Context module to model the complex spatial relationship of the cells, and attain high fidelity of the synthesized images through adversarial learning. Our experiments demonstrate that CellGAN can produce visually plausible TCT cytopathological images for different cell types. We also validate the effectiveness of using CellGAN to greatly augment patch-level cell classification performance.
Active learning (AL) is an effective approach to select the most informative samples to label so as to reduce the annotation cost. Existing AL methods typically work under the closed-set assumption, i.e., all classes existing in the unlabeled sample pool need to be classified by the target model. However, in some practical clinical tasks, the unlabeled pool may contain not only the target classes that need to be fine-grainedly classified, but also non-target classes that are irrelevant to the clinical tasks. Existing AL methods cannot work well in this scenario because they tend to select a large number of non-target samples. In this paper, we formulate this scenario as an open-set AL problem and propose an efficient framework, OpenAL, to address the challenge of querying samples from an unlabeled pool with both target class and non-target class samples. Experiments on fine-grained classification of pathology images show that OpenAL can significantly improve the query quality of target class samples and achieve higher performance than current state-of-the-art AL methods. Code is available at https://github.com/miccaiif/OpenAL.
Multilabel representation learning is recognized as a challenging problem that can be associated with either label dependencies between object categories or data-related issues such as the inherent imbalance of positive/negative samples. Recent advances address these challenges from model- and data-centric viewpoints. In model-centric, the label correlation is obtained by an external model designs (e.g., graph CNN) to incorporate an inductive bias for training. However, they fail to design an end-to-end training framework, leading to high computational complexity. On the contrary, in data-centric, the realistic nature of the dataset is considered for improving the classification while ignoring the label dependencies. In this paper, we propose a new end-to-end training framework -- dubbed KMCL (Kernel-based Mutlilabel Contrastive Learning) -- to address the shortcomings of both model- and data-centric designs. The KMCL first transforms the embedded features into a mixture of exponential kernels in Gaussian RKHS. It is then followed by encoding an objective loss that is comprised of (a) reconstruction loss to reconstruct kernel representation, (b) asymmetric classification loss to address the inherent imbalance problem, and (c) contrastive loss to capture label correlation. The KMCL models the uncertainty of the feature encoder while maintaining a low computational footprint. Extensive experiments are conducted on image classification tasks to showcase the consistent improvements of KMCL over the SOTA methods. PyTorch implementation is provided in \url{https://github.com/mahdihosseini/KMCL}.
In recent years, work has gone into developing deep interpretable methods for image classification that clearly attributes a model's output to specific features of the data. One such of these methods is the Prototypical Part Network (ProtoPNet), which attempts to classify images based on meaningful parts of the input. While this architecture is able to produce visually interpretable classifications, it often learns to classify based on parts of the image that are not semantically meaningful. To address this problem, we propose the Reward Reweighing, Reselecting, and Retraining (R3) post-processing framework, which performs three additional corrective updates to a pretrained ProtoPNet in an offline and efficient manner. The first two steps involve learning a reward model based on collected human feedback and then aligning the prototypes with human preferences. The final step is retraining, which realigns the base features and the classifier layer of the original model with the updated prototypes. We find that our R3 framework consistently improves both the interpretability and the predictive accuracy of ProtoPNet and its variants.
Test-time adaptation (TTA) is a technique aimed at enhancing the generalization performance of models by leveraging unlabeled samples solely during prediction. Given the need for robustness in neural network systems when faced with distribution shifts, numerous TTA methods have recently been proposed. However, evaluating these methods is often done under different settings, such as varying distribution shifts, backbones, and designing scenarios, leading to a lack of consistent and fair benchmarks to validate their effectiveness. To address this issue, we present a benchmark that systematically evaluates 13 prominent TTA methods and their variants on five widely used image classification datasets: CIFAR-10-C, CIFAR-100-C, ImageNet-C, DomainNet, and Office-Home. These methods encompass a wide range of adaptation scenarios (e.g. online adaptation v.s. offline adaptation, instance adaptation v.s. batch adaptation v.s. domain adaptation). Furthermore, we explore the compatibility of different TTA methods with diverse network backbones. To implement this benchmark, we have developed a unified framework in PyTorch, which allows for consistent evaluation and comparison of the TTA methods across the different datasets and network architectures. By establishing this benchmark, we aim to provide researchers and practitioners with a reliable means of assessing and comparing the effectiveness of TTA methods in improving model robustness and generalization performance. Our code is available at https://github.com/yuyongcan/Benchmark-TTA.
Information systems increasingly leverage artificial intelligence (AI) and machine learning (ML) to generate value from vast amounts of data. However, ML models are imperfect and can generate incorrect classifications. Hence, human-in-the-loop (HITL) extensions to ML models add a human review for instances that are difficult to classify. This study argues that continuously relying on human experts to handle difficult model classifications leads to a strong increase in human effort, which strains limited resources. To address this issue, we propose a hybrid system that creates artificial experts that learn to classify data instances from unknown classes previously reviewed by human experts. Our hybrid system assesses which artificial expert is suitable for classifying an instance from an unknown class and automatically assigns it. Over time, this reduces human effort and increases the efficiency of the system. Our experiments demonstrate that our approach outperforms traditional HITL systems for several benchmarks on image classification.
Tuberculosis (TB) is a major global health threat, causing millions of deaths annually. Although early diagnosis and treatment can greatly improve the chances of survival, it remains a major challenge, especially in developing countries. Recently, computer-aided tuberculosis diagnosis (CTD) using deep learning has shown promise, but progress is hindered by limited training data. To address this, we establish a large-scale dataset, namely the Tuberculosis X-ray (TBX11K) dataset, which contains 11,200 chest X-ray (CXR) images with corresponding bounding box annotations for TB areas. This dataset enables the training of sophisticated detectors for high-quality CTD. Furthermore, we propose a strong baseline, SymFormer, for simultaneous CXR image classification and TB infection area detection. SymFormer incorporates Symmetric Search Attention (SymAttention) to tackle the bilateral symmetry property of CXR images for learning discriminative features. Since CXR images may not strictly adhere to the bilateral symmetry property, we also propose Symmetric Positional Encoding (SPE) to facilitate SymAttention through feature recalibration. To promote future research on CTD, we build a benchmark by introducing evaluation metrics, evaluating baseline models reformed from existing detectors, and running an online challenge. Experiments show that SymFormer achieves state-of-the-art performance on the TBX11K dataset. The data, code, and models will be released at https://github.com/yun-liu/Tuberculosis.
Large vision-language models have achieved outstanding performance, but their size and computational requirements make their deployment on resource-constrained devices and time-sensitive tasks impractical. Model distillation, the process of creating smaller, faster models that maintain the performance of larger models, is a promising direction towards the solution. This paper investigates the distillation of visual representations in large teacher vision-language models into lightweight student models using a small- or mid-scale dataset. Notably, this study focuses on open-vocabulary out-of-distribution (OOD) generalization, a challenging problem that has been overlooked in previous model distillation literature. We propose two principles from vision and language modality perspectives to enhance student's OOD generalization: (1) by better imitating teacher's visual representation space, and carefully promoting better coherence in vision-language alignment with the teacher; (2) by enriching the teacher's language representations with informative and finegrained semantic attributes to effectively distinguish between different labels. We propose several metrics and conduct extensive experiments to investigate their techniques. The results demonstrate significant improvements in zero-shot and few-shot student performance on open-vocabulary out-of-distribution classification, highlighting the effectiveness of our proposed approaches. Poster: https://xuanlinli17.github.io/pdfs/iccv23_large_vlm_distillation_poster.pdf Code: https://github.com/xuanlinli17/large_vlm_distillation_ood
We investigate performance disparities in deep classifiers. We find that the ability of classifiers to separate individuals into subgroups varies substantially across medical imaging modalities and protected characteristics; crucially, we show that this property is predictive of algorithmic bias. Through theoretical analysis and extensive empirical evaluation, we find a relationship between subgroup separability, subgroup disparities, and performance degradation when models are trained on data with systematic bias such as underdiagnosis. Our findings shed new light on the question of how models become biased, providing important insights for the development of fair medical imaging AI.
We introduce a method for flexible and efficient continual learning in open-vocabulary image classification, drawing inspiration from the complementary learning systems observed in human cognition. Specifically, we propose to combine predictions from a CLIP zero-shot model and the exemplar-based model, using the zero-shot estimated probability that a sample's class is within the exemplar classes. We also propose a "tree probe" method, an adaption of lazy learning principles, which enables fast learning from new examples with competitive accuracy to batch-trained linear models. We test in data incremental, class incremental, and task incremental settings, as well as ability to perform flexible inference on varying subsets of zero-shot and learned categories. Our proposed method achieves a good balance of learning speed, target task effectiveness, and zero-shot effectiveness. Code will be available at https://github.com/jessemelpolio/TreeProbe.
Weakly supervised whole slide image classification is usually formulated as a multiple instance learning (MIL) problem, where each slide is treated as a bag, and the patches cut out of it are treated as instances. Existing methods either train an instance classifier through pseudo-labeling or aggregate instance features into a bag feature through attention mechanisms and then train a bag classifier, where the attention scores can be used for instance-level classification. However, the pseudo instance labels constructed by the former usually contain a lot of noise, and the attention scores constructed by the latter are not accurate enough, both of which affect their performance. In this paper, we propose an instance-level MIL framework based on contrastive learning and prototype learning to effectively accomplish both instance classification and bag classification tasks. To this end, we propose an instance-level weakly supervised contrastive learning algorithm for the first time under the MIL setting to effectively learn instance feature representation. We also propose an accurate pseudo label generation method through prototype learning. We then develop a joint training strategy for weakly supervised contrastive learning, prototype learning, and instance classifier training. Extensive experiments and visualizations on four datasets demonstrate the powerful performance of our method. Codes are available at https://github.com/miccaiif/INS.
Motivated by classical work on the numerical integration of ordinary differential equations we present a ResNet-styled neural network architecture that encodes non-expansive (1-Lipschitz) operators, as long as the spectral norms of the weights are appropriately constrained. This is to be contrasted with the ordinary ResNet architecture which, even if the spectral norms of the weights are constrained, has a Lipschitz constant that, in the worst case, grows exponentially with the depth of the network. Further analysis of the proposed architecture shows that the spectral norms of the weights can be further constrained to ensure that the network is an averaged operator, making it a natural candidate for a learned denoiser in Plug-and-Play algorithms. Using a novel adaptive way of enforcing the spectral norm constraints, we show that, even with these constraints, it is possible to train performant networks. The proposed architecture is applied to the problem of adversarially robust image classification, to image denoising, and finally to the inverse problem of deblurring.
Traditionally, convolutional neural networks (CNN) and vision transformers (ViT) have dominated computer vision. However, recently proposed vision graph neural networks (ViG) provide a new avenue for exploration. Unfortunately, for mobile applications, ViGs are computationally expensive due to the overhead of representing images as graph structures. In this work, we propose a new graph-based sparse attention mechanism, Sparse Vision Graph Attention (SVGA), that is designed for ViGs running on mobile devices. Additionally, we propose the first hybrid CNN-GNN architecture for vision tasks on mobile devices, MobileViG, which uses SVGA. Extensive experiments show that MobileViG beats existing ViG models and existing mobile CNN and ViT architectures in terms of accuracy and/or speed on image classification, object detection, and instance segmentation tasks. Our fastest model, MobileViG-Ti, achieves 75.7% top-1 accuracy on ImageNet-1K with 0.78 ms inference latency on iPhone 13 Mini NPU (compiled with CoreML), which is faster than MobileNetV2x1.4 (1.02 ms, 74.7% top-1) and MobileNetV2x1.0 (0.81 ms, 71.8% top-1). Our largest model, MobileViG-B obtains 82.6% top-1 accuracy with only 2.30 ms latency, which is faster and more accurate than the similarly sized EfficientFormer-L3 model (2.77 ms, 82.4%). Our work proves that well designed hybrid CNN-GNN architectures can be a new avenue of exploration for designing models that are extremely fast and accurate on mobile devices. Our code is publicly available at https://github.com/SLDGroup/MobileViG.
Filter pruning simultaneously accelerates the computation and reduces the memory overhead of CNNs, which can be effectively applied to edge devices and cloud services. In this paper, we propose a novel Knowledge-driven Differential Filter Sampler~(KDFS) with Masked Filter Modeling~(MFM) framework for filter pruning, which globally prunes the redundant filters based on the prior knowledge of a pre-trained model in a differential and non-alternative optimization. Specifically, we design a differential sampler with learnable sampling parameters to build a binary mask vector for each layer, determining whether the corresponding filters are redundant. To learn the mask, we introduce masked filter modeling to construct PCA-like knowledge by aligning the intermediate features from the pre-trained teacher model and the outputs of the student decoder taking sampling features as the input. The mask and sampler are directly optimized by the Gumbel-Softmax Straight-Through Gradient Estimator in an end-to-end manner in combination with global pruning constraint, MFM reconstruction error, and dark knowledge. Extensive experiments demonstrate the proposed KDFS's effectiveness in compressing the base models on various datasets. For instance, the pruned ResNet-50 on ImageNet achieves $55.36\%$ computation reduction, and $42.86\%$ parameter reduction, while only dropping $0.35\%$ Top-1 accuracy, significantly outperforming the state-of-the-art methods. The code is available at \url{https://github.com/Osilly/KDFS}.
In recent years, deep learning has become a breakthrough technique in assisting medical image diagnosis. Supervised learning using convolutional neural networks (CNN) provides state-of-the-art performance and has served as a benchmark for various medical image segmentation and classification. However, supervised learning deeply relies on large-scale annotated data, which is expensive, time-consuming, and even impractical to acquire in medical imaging applications. Active Learning (AL) methods have been widely applied in natural image classification tasks to reduce annotation costs by selecting more valuable examples from the unlabeled data pool. However, their application in medical image segmentation tasks is limited, and there is currently no effective and universal AL-based method specifically designed for 3D medical image segmentation. To address this limitation, we propose an AL-based method that can be simultaneously applied to 2D medical image classification, segmentation, and 3D medical image segmentation tasks. We extensively validated our proposed active learning method on three publicly available and challenging medical image datasets, Kvasir Dataset, COVID-19 Infection Segmentation Dataset, and BraTS2019 Dataset. The experimental results demonstrate that our PCDAL can achieve significantly improved performance with fewer annotations in 2D classification and segmentation and 3D segmentation tasks. The codes of this study are available at https://github.com/ortonwang/PCDAL.
With the increasing popularity and the increasing size of vision transformers (ViTs), there has been an increasing interest in making them more efficient and less computationally costly for deployment on edge devices with limited computing resources. Binarization can be used to help reduce the size of ViT models and their computational cost significantly, using popcount operations when the weights and the activations are in binary. However, ViTs suffer a larger performance drop when directly applying convolutional neural network (CNN) binarization methods or existing binarization methods to binarize ViTs compared to CNNs on datasets with a large number of classes such as ImageNet-1k. With extensive analysis, we find that binary vanilla ViTs such as DeiT miss out on a lot of key architectural properties that CNNs have that allow binary CNNs to have much higher representational capability than binary vanilla ViT. Therefore, we propose BinaryViT, in which inspired by the CNN architecture, we include operations from the CNN architecture into a pure ViT architecture to enrich the representational capability of a binary ViT without introducing convolutions. These include an average pooling layer instead of a token pooling layer, a block that contains multiple average pooling branches, an affine transformation right before the addition of each main residual connection, and a pyramid structure. Experimental results on the ImageNet-1k dataset show the effectiveness of these operations that allow a binary pure ViT model to be competitive with previous state-of-the-art (SOTA) binary CNN models.
Implicit Neural Representation (INR) is an innovative approach for representing complex shapes or objects without explicitly defining their geometry or surface structure. Instead, INR represents objects as continuous functions. Previous research has demonstrated the effectiveness of using neural networks as INR for image compression, showcasing comparable performance to traditional methods such as JPEG. However, INR holds potential for various applications beyond image compression. This paper introduces Rapid-INR, a novel approach that utilizes INR for encoding and compressing images, thereby accelerating neural network training in computer vision tasks. Our methodology involves storing the whole dataset directly in INR format on a GPU, mitigating the significant data communication overhead between the CPU and GPU during training. Additionally, the decoding process from INR to RGB format is highly parallelized and executed on-the-fly. To further enhance compression, we propose iterative and dynamic pruning, as well as layer-wise quantization, building upon previous work. We evaluate our framework on the image classification task, utilizing the ResNet-18 backbone network and three commonly used datasets with varying image sizes. Rapid-INR reduces memory consumption to only about 5% of the original dataset size in RGB format and achieves a maximum 6$\times$ speedup over the PyTorch training pipeline, as well as a maximum 1.2x speedup over the DALI training pipeline, with only a marginal decrease in accuracy. Importantly, Rapid-INR can be readily applied to other computer vision tasks and backbone networks with reasonable engineering efforts. Our implementation code is publicly available at https://github.com/sharc-lab/Rapid-INR.
Given the special situation of modeling gigapixel images, multiple instance learning (MIL) has become one of the most important frameworks for Whole Slide Image (WSI) classification. In current practice, most MIL networks often face two unavoidable problems in training: i) insufficient WSI data and ii) the sample memorization inclination inherent in neural networks. These problems may hinder MIL models from adequate and efficient training, suppressing the continuous performance promotion of classification models on WSIs. Inspired by the basic idea of Mixup, this paper proposes a new Pseudo-bag Mixup (PseMix) data augmentation scheme to improve the training of MIL models. This scheme generalizes the Mixup strategy for general images to special WSIs via pseudo-bags so as to be applied in MIL-based WSI classification. Cooperated by pseudo-bags, our PseMix fulfills the critical size alignment and semantic alignment in Mixup strategy. Moreover, it is designed as an efficient and decoupled method, neither involving time-consuming operations nor relying on MIL model predictions. Comparative experiments and ablation studies are specially designed to evaluate the effectiveness and advantages of our PseMix. Experimental results show that PseMix could often assist state-of-the-art MIL networks to refresh their classification performance on WSIs. Besides, it could also boost the generalization performance of MIL models in special test scenarios, and promote their robustness to patch occlusion and label noise. Our source code is available at https://github.com/liupei101/PseMix.
Spiking Neural Networks (SNNs) are biologically plausible models that have been identified as potentially apt for deploying energy-efficient intelligence at the edge, particularly for sequential learning tasks. However, training of SNNs poses significant challenges due to the necessity for precise temporal and spatial credit assignment. Back-propagation through time (BPTT) algorithm, whilst the most widely used method for addressing these issues, incurs high computational cost due to its temporal dependency. In this work, we propose S-TLLR, a novel three-factor temporal local learning rule inspired by the Spike-Timing Dependent Plasticity (STDP) mechanism, aimed at training deep SNNs on event-based learning tasks. Furthermore, S-TLLR is designed to have low memory and time complexities, which are independent of the number of time steps, rendering it suitable for online learning on low-power edge devices. To demonstrate the scalability of our proposed method, we have conducted extensive evaluations on event-based datasets spanning a wide range of applications, such as image and gesture recognition, audio classification, and optical flow estimation. In all the experiments, S-TLLR achieved high accuracy, comparable to BPTT, with a reduction in memory between $5-50\times$ and multiply-accumulate (MAC) operations between $1.3-6.6\times$.