Recently, various deep learning methods have shown significant successes in medical image analysis, especially in the detection of cancer metastases in hematoxylin and eosin (H&E) stained whole-slide images (WSIs). However, in order to obtain good performance, these research achievements rely on hundreds of well-annotated WSIs. In this study, we tackle the tumor localization and detection problem under the setting of few labeled whole slide images and introduce a patch-based analysis pipeline based on the latest reverse knowledge distillation architecture. To address the extremely unbalanced normal and tumorous samples in training sample collection, we applied the focal loss formula to the representation similarity metric for model optimization. Compared with prior arts, our method achieves similar performance by less than ten percent of training samples on the public Camelyon16 dataset. In addition, this is the first work that show the great potential of the knowledge distillation models in computational histopathology.
The Victoria Amazonica plant, often known as the Giant Water Lily, has the largest floating spherical leaf in the world, with a maximum leaf diameter of 3 meters. It spreads its leaves by the force of its spines and creates a large shadow underneath, killing any plants that require sunlight. These water tyrants use their formidable spines to compel each other to the surface and increase their strength to grab more space from the surface. As they spread throughout the pond or basin, with the earliest-growing leaves having more room to grow, each leaf gains a unique size. Its flowers are transsexual and when they bloom, Cyclocephala beetles are responsible for the pollination process, being attracted to the scent of the female flower. After entering the flower, the beetle becomes covered with pollen and transfers it to another flower for fertilization. After the beetle leaves, the flower turns into a male and changes color from white to pink. The male flower dies and sinks into the water, releasing its seed to help create a new generation. In this paper, the mathematical life cycle of this magnificent plant is introduced, and each leaf and blossom are treated as a single entity. The proposed bio-inspired algorithm is tested with 24 benchmark optimization test functions, such as Ackley, and compared to ten other famous algorithms, including the Genetic Algorithm. The proposed algorithm is tested on 10 optimization problems: Minimum Spanning Tree, Hub Location Allocation, Quadratic Assignment, Clustering, Feature Selection, Regression, Economic Dispatching, Parallel Machine Scheduling, Color Quantization, and Image Segmentation and compared to traditional and bio-inspired algorithms. Overall, the performance of the algorithm in all tasks is satisfactory.
There is no convincing evidence that backpropagation is a biologically plausible mechanism, and further studies of alternative learning methods are needed. A novel online clustering algorithm is presented that can produce arbitrary shaped clusters from inputs in an unsupervised manner, and requires no prior knowledge of the number of clusters in the input data. This is achieved by finding correlated outputs from functions that capture commonly occurring input patterns. The algorithm can be deemed more biologically plausible than model optimization through backpropagation, although practical applicability may require additional research. However, the method yields satisfactory results on several toy datasets on a noteworthy range of hyperparameters.
The recommender system (RS) has been an integral toolkit of online services. They are equipped with various deep learning techniques to model user preference based on identifier and attribute information. With the emergence of multimedia services, such as short videos, news and etc., understanding these contents while recommending becomes critical. Besides, multimodal features are also helpful in alleviating the problem of data sparsity in RS. Thus, Multimodal Recommender System (MRS) has attracted much attention from both academia and industry recently. In this paper, we will give a comprehensive survey of the MRS models, mainly from technical views. First, we conclude the general procedures and major challenges for MRS. Then, we introduce the existing MRS models according to four categories, i.e., Modality Encoder, Feature Interaction, Feature Enhancement and Model Optimization. Besides, to make it convenient for those who want to research this field, we also summarize the dataset and code resources. Finally, we discuss some promising future directions of MRS and conclude this paper. To access more details of the surveyed papers, such as implementation code, we open source a repository.
The utilization of programming language (PL) models, pre-trained on large-scale code corpora, as a means of automating software engineering processes has demonstrated considerable potential in streamlining various code generation tasks such as code completion, code translation, and program synthesis. However, current approaches mainly rely on supervised fine-tuning objectives borrowed from text generation, neglecting unique sequence-level characteristics of code, including but not limited to compilability as well as syntactic and functional correctness. To address this limitation, we propose PPOCoder, a new framework for code generation that synergistically combines pre-trained PL models with Proximal Policy Optimization (PPO) which is a widely used deep reinforcement learning technique. By utilizing non-differentiable feedback from code execution and structure alignment, PPOCoder seamlessly integrates external code-specific knowledge into the model optimization process. It's important to note that PPOCoder is a task-agnostic and model-agnostic framework that can be used across different code generation tasks and PLs. Extensive experiments on three code generation tasks demonstrate the effectiveness of our proposed approach compared to SOTA methods, achieving significant improvements in compilation success rates and functional correctness across different PLs.
In this research work, we have proposed a thermal tiny-YOLO multi-class object detection (TTYMOD) system as a smart forward sensing system that should remain effective in all weather and harsh environmental conditions using an end-to-end YOLO deep learning framework. It provides enhanced safety and improved awareness features for driver assistance. The system is trained on large-scale thermal public datasets as well as newly gathered novel open-sourced dataset comprising of more than 35,000 distinct thermal frames. For optimal training and convergence of YOLO-v5 tiny network variant on thermal data, we have employed different optimizers which include stochastic decent gradient (SGD), Adam, and its variant AdamW which has an improved implementation of weight decay. The performance of thermally tuned tiny architecture is further evaluated on the public as well as locally gathered test data in diversified and challenging weather and environmental conditions. The efficacy of a thermally tuned nano network is quantified using various qualitative metrics which include mean average precision, frames per second rate, and average inference time. Experimental outcomes show that the network achieved the best mAP of 56.4% with an average inference time/ frame of 4 milliseconds. The study further incorporates optimization of tiny network variant using the TensorFlow Lite quantization tool this is beneficial for the deployment of deep learning architectures on the edge and mobile devices. For this study, we have used a raspberry pi 4 computing board for evaluating the real-time feasibility performance of an optimized version of the thermal object detection network for the automotive sensor suite. The source code, trained and optimized models and complete validation/ testing results are publicly available at https://github.com/MAli-Farooq/Thermal-YOLO-And-Model-Optimization-Using-TensorFlowLite.
Compared to query-based black-box attacks, transfer-based black-box attacks do not require any information of the attacked models, which ensures their secrecy. However, most existing transfer-based approaches rely on ensembling multiple models to boost the attack transferability, which is time- and resource-intensive, not to mention the difficulty of obtaining diverse models on the same task. To address this limitation, in this work, we focus on the single-model transfer-based black-box attack on object detection, utilizing only one model to achieve a high-transferability adversarial attack on multiple black-box detectors. Specifically, we first make observations on the patch optimization process of the existing method and propose an enhanced attack framework by slightly adjusting its training strategies. Then, we analogize patch optimization with regular model optimization, proposing a series of self-ensemble approaches on the input data, the attacked model, and the adversarial patch to efficiently make use of the limited information and prevent the patch from overfitting. The experimental results show that the proposed framework can be applied with multiple classical base attack methods (e.g., PGD and MIM) to greatly improve the black-box transferability of the well-optimized patch on multiple mainstream detectors, meanwhile boosting white-box performance. Our code is available at https://github.com/VDIGPKU/T-SEA.
Deep Neural Networks are vulnerable to adversarial attacks. Among many defense strategies, adversarial training with untargeted attacks is one of the most effective methods. Theoretically, adversarial perturbation in untargeted attacks can be added along arbitrary directions and the predicted labels of untargeted attacks should be unpredictable. However, we find that the naturally imbalanced inter-class semantic similarity makes those hard-class pairs become virtual targets of each other. This study investigates the impact of such closely-coupled classes on adversarial attacks and develops a self-paced reweighting strategy in adversarial training accordingly. Specifically, we propose to upweight hard-class pair losses in model optimization, which prompts learning discriminative features from hard classes. We further incorporate a term to quantify hard-class pair consistency in adversarial training, which greatly boosts model robustness. Extensive experiments show that the proposed adversarial training method achieves superior robustness performance over state-of-the-art defenses against a wide range of adversarial attacks.
We present an explicit-grid based method for efficiently reconstructing streaming radiance fields for novel view synthesis of real world dynamic scenes. Instead of training a single model that combines all the frames, we formulate the dynamic modeling problem with an incremental learning paradigm in which per-frame model difference is trained to complement the adaption of a base model on the current frame. By exploiting the simple yet effective tuning strategy with narrow bands, the proposed method realizes a feasible framework for handling video sequences on-the-fly with high training efficiency. The storage overhead induced by using explicit grid representations can be significantly reduced through the use of model difference based compression. We also introduce an efficient strategy to further accelerate model optimization for each frame. Experiments on challenging video sequences demonstrate that our approach is capable of achieving a training speed of 15 seconds per-frame with competitive rendering quality, which attains $1000 \times$ speedup over the state-of-the-art implicit methods. Code is available at https://github.com/AlgoHunt/StreamRF.
We propose a controllable style transfer framework based on Implicit Neural Representation that pixel-wisely controls the stylized output via test-time training. Unlike traditional image optimization methods that often suffer from unstable convergence and learning-based methods that require intensive training and have limited generalization ability, we present a model optimization framework that optimizes the neural networks during test-time with explicit loss functions for style transfer. After being test-time trained once, thanks to the flexibility of the INR-based model, our framework can precisely control the stylized images in a pixel-wise manner and freely adjust image resolution without further optimization or training. We demonstrate several applications.
Inverse protein folding, the process of designing sequences that fold into a specific 3D structure, is crucial in bio-engineering and drug discovery. Traditional methods rely on experimentally resolved structures, but these cover only a small fraction of protein sequences. Forward folding models like AlphaFold offer a potential solution by accurately predicting structures from sequences. However, these models are too slow for integration into the optimization loop of inverse folding models during training. To address this, we propose using knowledge distillation on folding model confidence metrics, such as pTM or pLDDT scores, to create a faster and end-to-end differentiable distilled model. This model can then be used as a structure consistency regularizer in training the inverse folding model. Our technique is versatile and can be applied to other design tasks, such as sequence-based protein infilling. Experimental results show that our method outperforms non-regularized baselines, yielding up to 3% improvement in sequence recovery and up to 45% improvement in protein diversity while maintaining structural consistency in generated sequences. Code is available at https://github.com/IBM/AFDistill
Sensitive datasets are often underutilized in research and industry due to privacy concerns, limiting the potential of valuable data-driven insights. Synthetic data generation presents a promising solution to address this challenge by balancing privacy protection with data utility. This paper introduces a new approach to mitigate privacy risks associated with outlier observations in synthetic datasets: the Local Resampler (LR). The LR leverages the $k$-nearest neighbors algorithm to generate synthetic data while minimizing disclosure risks by underrepresenting outliers, even when they are not detectable in marginal distributions. Theoretical and empirical analyses demonstrate that the LR effectively mitigates outlier-driven disclosure risks, and accurately replicates multimodal, skewed, and non-convex support distributions. The semiparametric nature of the LR ensures a low computational burden and works efficiently even with small samples. By parameterizing the balance between privacy risks and data utility, this approach promotes broader access to sensitive datasets for research.
This work presents a deep learning-based plant disease diagnostic system using images of fruits and leaves. Five state-of-the-art convolutional neural networks (CNN) have been employed for implementing the system. Hitherto model accuracy has been the focus for such applications and model optimization has not been accounted for the model to be applicable to end-user devices. Two model quantization techniques such as float16 and dynamic range quantization have been applied to the five state-of-the-art CNN architectures. The study shows that the quantized GoogleNet model achieved the size of 0.143 MB with an accuracy of 97%, which is the best candidate model considering the size criterion. The EfficientNet model achieved the size of 4.2MB with an accuracy of 99%, which is the best model considering the performance criterion. The source codes are available at https://github.com/CompostieAI/Guava-disease-detection.
Automatic pavement distress classification facilitates improving the efficiency of pavement maintenance and reducing the cost of labor and resources. A recently influential branch of this task divides the pavement image into patches and addresses these issues from the perspective of multi-instance learning. However, these methods neglect the correlation between patches and suffer from a low efficiency in the model optimization and inference. Meanwhile, Swin Transformer is able to address both of these issues with its unique strengths. Built upon Swin Transformer, we present a vision Transformer named \textbf{P}avement \textbf{I}mage \textbf{C}lassification \textbf{T}ransformer (\textbf{PicT}) for pavement distress classification. In order to better exploit the discriminative information of pavement images at the patch level, the \textit{Patch Labeling Teacher} is proposed to leverage a teacher model to dynamically generate pseudo labels of patches from image labels during each iteration, and guides the model to learn the discriminative features of patches. The broad classification head of Swin Transformer may dilute the discriminative features of distressed patches in the feature aggregation step due to the small distressed area ratio of the pavement image. To overcome this drawback, we present a \textit{Patch Refiner} to cluster patches into different groups and only select the highest distress-risk group to yield a slim head for the final image classification. We evaluate our method on CQU-BPDD. Extensive results show that \textbf{PicT} outperforms the second-best performed model by a large margin of $+2.4\%$ in P@R on detection task, $+3.9\%$ in $F1$ on recognition task, and 1.8x throughput, while enjoying 7x faster training speed using the same computing resources. Our codes and models have been released on \href{https://github.com/DearCaat/PicT}{https://github.com/DearCaat/PicT}.
Learning with noisy labels (LNL) aims at designing strategies to improve model performance and generalization by mitigating the effects of model overfitting to noisy labels. The key success of LNL lies in identifying as many clean samples as possible from massive noisy data, while rectifying the wrongly assigned noisy labels. Recent advances employ the predicted label distributions of individual samples to perform noise verification and noisy label correction, easily giving rise to confirmation bias. To mitigate this issue, we propose Neighborhood Collective Estimation, in which the predictive reliability of a candidate sample is re-estimated by contrasting it against its feature-space nearest neighbors. Specifically, our method is divided into two steps: 1) Neighborhood Collective Noise Verification to separate all training samples into a clean or noisy subset, 2) Neighborhood Collective Label Correction to relabel noisy samples, and then auxiliary techniques are used to assist further model optimization. Extensive experiments on four commonly used benchmark datasets, i.e., CIFAR-10, CIFAR-100, Clothing-1M and Webvision-1.0, demonstrate that our proposed method considerably outperforms state-of-the-art methods.
Few-shot bioacoustic event detection is a task that detects the occurrence time of a novel sound given a few examples. Previous methods employ metric learning to build a latent space with the labeled part of different sound classes, also known as positive events. In this study, we propose a segment-level few-shot learning framework that utilizes both the positive and negative events during model optimization. Training with negative events, which are larger in volume than positive events, can increase the generalization ability of the model. In addition, we use transductive inference on the validation set during training for better adaptation to novel classes. We conduct ablation studies on our proposed method with different setups on input features, training data, and hyper-parameters. Our final system achieves an F-measure of 62.73 on the DCASE 2022 challenge task 5 (DCASE2022-T5) validation set, outperforming the performance of the baseline prototypical network 34.02 by a large margin. Using the proposed method, our submitted system ranks 2nd in DCASE2022-T5. The code of this paper is fully open-sourced at https://github.com/haoheliu/DCASE_2022_Task_5.
Monocular 3D object detection is an essential perception task for autonomous driving. However, the high reliance on large-scale labeled data make it costly and time-consuming during model optimization. To reduce such over-reliance on human annotations, we propose Mix-Teaching, an effective semi-supervised learning framework applicable to employ both labeled and unlabeled images in training stage. Mix-Teaching first generates pseudo-labels for unlabeled images by self-training. The student model is then trained on the mixed images possessing much more intensive and precise labeling by merging instance-level image patches into empty backgrounds or labeled images. This is the first to break the image-level limitation and put high-quality pseudo labels from multi frames into one image for semi-supervised training. Besides, as a result of the misalignment between confidence score and localization quality, it's hard to discriminate high-quality pseudo-labels from noisy predictions using only confidence-based criterion. To that end, we further introduce an uncertainty-based filter to help select reliable pseudo boxes for the above mixing operation. To the best of our knowledge, this is the first unified SSL framework for monocular 3D object detection. Mix-Teaching consistently improves MonoFlex and GUPNet by significant margins under various labeling ratios on KITTI dataset. For example, our method achieves around +6.34% [email omitted] improvement against the GUPNet baseline on validation set when using only 10% labeled data. Besides, by leveraging full training set and the additional 48K raw images of KITTI, it can further improve the MonoFlex by +4.65% improvement on [email omitted] for car detection, reaching 18.54% [email omitted], which ranks the 1st place among all monocular based methods on KITTI test leaderboard. The code and pretrained models will be released at https://github.com/yanglei18/Mix-Teaching.
Prompt tuning is an emerging way of adapting pre-trained language models to downstream tasks. However, the existing studies are mainly to add prompts to the input sequence. This way would not work as expected due to the intermediate multi-head self-attention and feed-forward network computation, making model optimization not very smooth. Hence, we propose a novel tuning way called layer tuning, aiming to add learnable parameters in Transformer layers. Specifically, we focus on layer tuning for feed-forward network in the Transformer, namely FL-tuning. It introduces additional units into the hidden layer of each feed-forward network. We conduct extensive experiments on the public CLUE benchmark. The results show that: 1) Our FL-tuning outperforms prompt tuning methods under both full-data and few-shot settings in almost all cases. In particular, it improves accuracy by 17.93% (full-data setting) on WSC 1.0 and F1 by 16.142% (few-shot setting) on CLUENER over P-tuning v2. 2) Our FL-tuning is more stable and converges about 1.17 times faster than P-tuning v2. 3) With only about 3% of Transformer's parameters to be trained, FL-tuning is comparable with fine-tuning on most datasets, and significantly outperforms fine-tuning (e.g., accuracy improved by 12.9% on WSC 1.1) on several datasets. The source codes are available at https://github.com/genggui001/FL-Tuning.
Speech enhancement has seen great improvement in recent years using end-to-end neural networks. However, most models are agnostic to the spoken phonetic content. Recently, several studies suggested phonetic-aware speech enhancement, mostly using perceptual supervision. Yet, injecting phonetic features during model optimization can take additional forms (e.g., model conditioning). In this paper, we conduct a systematic comparison between different methods of incorporating phonetic information in a speech enhancement model. By conducting a series of controlled experiments, we observe the influence of different phonetic content models as well as various feature-injection techniques on enhancement performance, considering both causal and non-causal models. Specifically, we evaluate three settings for injecting phonetic information, namely: i) feature conditioning; ii) perceptual supervision; and iii) regularization. Phonetic features are obtained using an intermediate layer of either a supervised pre-trained Automatic Speech Recognition (ASR) model or by using a pre-trained Self-Supervised Learning (SSL) model. We further observe the effect of choosing different embedding layers on performance, considering both manual and learned configurations. Results suggest that using a SSL model as phonetic features outperforms the ASR one in most cases. Interestingly, the conditioning setting performs best among the evaluated configurations.
Imbalanced domain learning aims to produce accurate models in predicting instances that, though underrepresented, are of utmost importance for the domain. Research in this field has been mainly focused on classification tasks. Comparatively, the number of studies carried out in the context of regression tasks is negligible. One of the main reasons for this is the lack of loss functions capable of focusing on minimizing the errors of extreme (rare) values. Recently, an evaluation metric was introduced: Squared Error Relevance Area (SERA). This metric posits a bigger emphasis on the errors committed at extreme values while also accounting for the performance in the overall target variable domain, thus preventing severe bias. However, its effectiveness as an optimization metric is unknown. In this paper, our goal is to study the impacts of using SERA as an optimization criterion in imbalanced regression tasks. Using gradient boosting algorithms as proof of concept, we perform an experimental study with 36 data sets of different domains and sizes. Results show that models that used SERA as an objective function are practically better than the models produced by their respective standard boosting algorithms at the prediction of extreme values. This confirms that SERA can be embedded as a loss function into optimization-based learning algorithms for imbalanced regression scenarios.