Objective: Electroencephalography signals are recorded as a multidimensional dataset. We propose a new framework based on the augmented covariance extracted from an autoregressive model to improve motor imagery classification. Methods: From the autoregressive model can be derived the Yule-Walker equations, which show the emergence of a symmetric positive definite matrix: the augmented covariance matrix. The state-of the art for classifying covariance matrices is based on Riemannian Geometry. A fairly natural idea is therefore to extend the standard approach using these augmented covariance matrices. The methodology for creating the augmented covariance matrix shows a natural connection with the delay embedding theorem proposed by Takens for dynamical systems. Such an embedding method is based on the knowledge of two parameters: the delay and the embedding dimension, respectively related to the lag and the order of the autoregressive model. This approach provides new methods to compute the hyper-parameters in addition to standard grid search. Results: The augmented covariance matrix performed noticeably better than any state-of-the-art methods. We will test our approach on several datasets and several subjects using the MOABB framework, using both within-session and cross-session evaluation. Conclusion: The improvement in results is due to the fact that the augmented covariance matrix incorporates not only spatial but also temporal information, incorporating nonlinear components of the signal through an embedding procedure, which allows the leveraging of dynamical systems algorithms. Significance: These results extend the concepts and the results of the Riemannian distance based classification algorithm.
Context: Requirements engineering researchers have been experimenting with machine learning and deep learning approaches for a range of RE tasks, such as requirements classification, requirements tracing, ambiguity detection, and modelling. However, most of today's ML/DL approaches are based on supervised learning techniques, meaning that they need to be trained using a large amount of task-specific labelled training data. This constraint poses an enormous challenge to RE researchers, as the lack of labelled data makes it difficult for them to fully exploit the benefit of advanced ML/DL technologies. Objective: This paper addresses this problem by showing how a zero-shot learning approach can be used for requirements classification without using any labelled training data. We focus on the classification task because many RE tasks can be framed as classification problems. Method: The ZSL approach used in our study employs contextual word-embeddings and transformer-based language models. We demonstrate this approach through a series of experiments to perform three classification tasks: (1)FR/NFR: classification functional requirements vs non-functional requirements; (2)NFR: identification of NFR classes; (3)Security: classification of security vs non-security requirements. Results: The study shows that the ZSL approach achieves an F1 score of 0.66 for the FR/NFR task. For the NFR task, the approach yields F1~0.72-0.80, considering the most frequent classes. For the Security task, F1~0.66. All of the aforementioned F1 scores are achieved with zero-training efforts. Conclusion: This study demonstrates the potential of ZSL for requirements classification. An important implication is that it is possible to have very little or no training data to perform classification tasks. The proposed approach thus contributes to the solution of the long-standing problem of data shortage in RE.
Few-shot learning has been used to tackle the problem of label scarcity in text classification, of which meta-learning based methods have shown to be effective, such as the prototypical networks (PROTO). Despite the success of PROTO, there still exist three main problems: (1) ignore the randomness of the sampled support sets when computing prototype vectors; (2) disregard the importance of labeled samples; (3) construct meta-tasks in a purely random manner. In this paper, we propose a Meta-Learning Siamese Network, namely, Meta-SN, to address these issues. Specifically, instead of computing prototype vectors from the sampled support sets, Meta-SN utilizes external knowledge (e.g. class names and descriptive texts) for class labels, which is encoded as the low-dimensional embeddings of prototype vectors. In addition, Meta-SN presents a novel sampling strategy for constructing meta-tasks, which gives higher sampling probabilities to hard-to-classify samples. Extensive experiments are conducted on six benchmark datasets to show the clear superiority of Meta-SN over other state-of-the-art models. For reproducibility, all the datasets and codes are provided at https://github.com/hccngu/Meta-SN.
In this work, we investigate the problem of Model-Agnostic Zero-Shot Classification (MA-ZSC), which refers to training non-specific classification architectures (downstream models) to classify real images without using any real images during training. Recent research has demonstrated that generating synthetic training images using diffusion models provides a potential solution to address MA-ZSC. However, the performance of this approach currently falls short of that achieved by large-scale vision-language models. One possible explanation is a potential significant domain gap between synthetic and real images. Our work offers a fresh perspective on the problem by providing initial insights that MA-ZSC performance can be improved by improving the diversity of images in the generated dataset. We propose a set of modifications to the text-to-image generation process using a pre-trained diffusion model to enhance diversity, which we refer to as our $\textbf{bag of tricks}$. Our approach shows notable improvements in various classification architectures, with results comparable to state-of-the-art models such as CLIP. To validate our approach, we conduct experiments on CIFAR10, CIFAR100, and EuroSAT, which is particularly difficult for zero-shot classification due to its satellite image domain. We evaluate our approach with five classification architectures, including ResNet and ViT. Our findings provide initial insights into the problem of MA-ZSC using diffusion models. All code will be available on GitHub.
Previous research has demonstrated the advantages of integrating data from multiple sources over traditional unimodal data, leading to the emergence of numerous novel multimodal applications. We propose a multimodal classification benchmark MuG with eight datasets that allows researchers to evaluate and improve their models. These datasets are collected from four various genres of games that cover tabular, textual, and visual modalities. We conduct multi-aspect data analysis to provide insights into the benchmark, including label balance ratios, percentages of missing features, distributions of data within each modality, and the correlations between labels and input modalities. We further present experimental results obtained by several state-of-the-art unimodal classifiers and multimodal classifiers, which demonstrate the challenging and multimodal-dependent properties of the benchmark. MuG is released at https://github.com/lujiaying/MUG-Bench with the data, tutorials, and implemented baselines.
Open vocabulary models (e.g. CLIP) have shown strong performance on zero-shot classification through their ability generate embeddings for each class based on their (natural language) names. Prior work has focused on improving the accuracy of these models through prompt engineering or by incorporating a small amount of labeled downstream data (via finetuning). However, there has been little focus on improving the richness of the class names themselves, which can pose issues when class labels are coarsely-defined and are uninformative. We propose Classification with Hierarchical Label Sets (or CHiLS), an alternative strategy for zero-shot classification specifically designed for datasets with implicit semantic hierarchies. CHiLS proceeds in three steps: (i) for each class, produce a set of subclasses, using either existing label hierarchies or by querying GPT-3; (ii) perform the standard zero-shot CLIP procedure as though these subclasses were the labels of interest; (iii) map the predicted subclass back to its parent to produce the final prediction. Across numerous datasets with underlying hierarchical structure, CHiLS leads to improved accuracy in situations both with and without ground-truth hierarchical information. CHiLS is simple to implement within existing zero-shot pipelines and requires no additional training cost. Code is available at: https://github.com/acmi-lab/CHILS.
The COVID-19 pandemic has resulted in hundreds of million cases and numerous deaths worldwide. Here, we develop a novel classification network CECT by controllable ensemble convolutional neural network and transformer to provide a timely and accurate COVID-19 diagnosis. The CECT is composed of a parallel convolutional encoder block, an aggregate transposed-convolutional decoder block, and a windowed attention classification block. Each block captures features at different scales from 28 $\times$ 28 to 224 $\times$ 224 from the input, composing enriched and comprehensive information. Different from existing methods, our CECT can capture features at both multi-local and global scales without any sophisticated module design. Moreover, the contribution of local features at different scales can be controlled with the proposed ensemble coefficients. We evaluate CECT on two public COVID-19 datasets and it reaches the highest accuracy of 98.1% in the intra-dataset evaluation, outperforming existing state-of-the-art methods. Moreover, the developed CECT achieves an accuracy of 90.9% on the unseen dataset in the inter-dataset evaluation, showing extraordinary generalization ability. With remarkable feature capture ability and generalization ability, we believe CECT can be extended to other medical scenarios as a powerful diagnosis tool. Code is available at https://github.com/NUS-Tim/CECT.
Time Series Classification and Extrinsic Regression are important and challenging machine learning tasks. Deep learning has revolutionized natural language processing and computer vision and holds great promise in other fields such as time series analysis where the relevant features must often be abstracted from the raw data but are not known a priori. This paper surveys the current state of the art in the fast-moving field of deep learning for time series classification and extrinsic regression. We review different network architectures and training methods used for these tasks and discuss the challenges and opportunities when applying deep learning to time series data. We also summarize two critical applications of time series classification and extrinsic regression, human activity recognition and satellite earth observation.
Recent research on robustness has revealed significant performance gaps between neural image classifiers trained on datasets that are similar to the test set, and those that are from a naturally shifted distribution, such as sketches, paintings, and animations of the object categories observed during training. Prior work focuses on reducing this gap by designing engineered augmentations of training data or through unsupervised pretraining of a single large model on massive in-the-wild training datasets scraped from the Internet. However, the notion of a dataset is also undergoing a paradigm shift in recent years. With drastic improvements in the quality, ease-of-use, and access to modern generative models, generated data is pervading the web. In this light, we study the question: How do these generated datasets influence the natural robustness of image classifiers? We find that Imagenet classifiers trained on real data augmented with generated data achieve higher accuracy and effective robustness than standard training and popular augmentation strategies in the presence of natural distribution shifts. We analyze various factors influencing these results, including the choice of conditioning strategies and the amount of generated data. Additionally, we find that the standard ImageNet classifiers suffer a performance degradation of upto 20\% on the generated data, indicating their fragility at accurately classifying the objects under novel variations. Lastly, we demonstrate that the image classifiers, which have been trained on real data augmented with generated data from the base generative model, exhibit greater resilience to natural distribution shifts compared to the classifiers trained on real data augmented with generated data from the finetuned generative model on the real data. The code, models, and datasets are available at https://github.com/Hritikbansal/generative-robustness.
Few-shot image generation aims to generate data of an unseen category based on only a few samples. Apart from basic content generation, a bunch of downstream applications hopefully benefit from this task, such as low-data detection and few-shot classification. To achieve this goal, the generated images should guarantee category retention for classification beyond the visual quality and diversity. In our preliminary work, we present an ``editing-based'' framework Attribute Group Editing (AGE) for reliable few-shot image generation, which largely improves the generation performance. Nevertheless, AGE's performance on downstream classification is not as satisfactory as expected. This paper investigates the class inconsistency problem and proposes Stable Attribute Group Editing (SAGE) for more stable class-relevant image generation. SAGE takes use of all given few-shot images and estimates a class center embedding based on the category-relevant attribute dictionary. Meanwhile, according to the projection weights on the category-relevant attribute dictionary, we can select category-irrelevant attributes from the similar seen categories. Consequently, SAGE injects the whole distribution of the novel class into StyleGAN's latent space, thus largely remains the category retention and stability of the generated images. Going one step further, we find that class inconsistency is a common problem in GAN-generated images for downstream classification. Even though the generated images look photo-realistic and requires no category-relevant editing, they are usually of limited help for downstream classification. We systematically discuss this issue from both the generative model and classification model perspectives, and propose to boost the downstream classification performance of SAGE by enhancing the pixel and frequency components.
We present a deep Graph Convolutional Kernel Machine (GCKM) for semi-supervised node classification in graphs. The method is built of two main types of blocks: (i) We introduce unsupervised kernel machine layers propagating the node features in a one-hop neighborhood, using implicit node feature mappings. (ii) We specify a semi-supervised classification kernel machine through the lens of the Fenchel-Young inequality. We derive an effective initialization scheme and efficient end-to-end training algorithm in the dual variables for the full architecture. The main idea underlying GCKM is that, because of the unsupervised core, the final model can achieve higher performance in semi-supervised node classification when few labels are available for training. Experimental results demonstrate the effectiveness of the proposed framework.
Semi-supervised learning (SSL) has been widely explored in recent years, and it is an effective way of leveraging unlabeled data to reduce the reliance on labeled data. In this work, we adjust neural processes (NPs) to the semi-supervised image classification task, resulting in a new method named NP-Match. NP-Match is suited to this task for two reasons. Firstly, NP-Match implicitly compares data points when making predictions, and as a result, the prediction of each unlabeled data point is affected by the labeled data points that are similar to it, which improves the quality of pseudo-labels. Secondly, NP-Match is able to estimate uncertainty that can be used as a tool for selecting unlabeled samples with reliable pseudo-labels. Compared with uncertainty-based SSL methods implemented with Monte-Carlo (MC) dropout, NP-Match estimates uncertainty with much less computational overhead, which can save time at both the training and the testing phases. We conducted extensive experiments on five public datasets under three semi-supervised image classification settings, namely, the standard semi-supervised image classification, the imbalanced semi-supervised image classification, and the multi-label semi-supervised image classification, and NP-Match outperforms state-of-the-art (SOTA) approaches or achieves competitive results on them, which shows the effectiveness of NP-Match and its potential for SSL. The codes are at https://github.com/Jianf-Wang/NP-Match
Motivation: As viruses that mainly infect bacteria, phages are key players across a wide range of ecosystems. Analyzing phage proteins is indispensable for understanding phages' functions and roles in microbiomes. High-throughput sequencing enables us to obtain phages in different microbiomes with low cost. However, compared to the fast accumulation of newly identified phages, phage protein classification remains difficult. In particular, a fundamental need is to annotate virion proteins, the structural proteins such as major tail, baseplate etc. Although there are experimental methods for virion protein identification, they are too expensive or time-consuming, leaving a large number of proteins unclassified. Thus, there is a great demand to develop a computational method for fast and accurate phage virion protein classification. Results: In this work, we adapted the state-of-the-art image classification model, Vision Transformer, to conduct virion protein classification. By encoding protein sequences into unique images using chaos gaming representation, we can leverage Vision Transformer to learn both local and global features from sequence ``images''. Our method, PhaVIP, has two main functions: classifying PVP and non-PVP sequences and annotating the types of PVP, such as capsid and tail. We tested PhaVIP on several datasets with increasing difficulty and benchmarked it against alternative tools. The experimental results show that PhaVIP has superior performance. After validating the performance of PhaVIP, we investigated two applications that can use the output of PhaVIP: phage taxonomy classification and phage host prediction. The results show the benefit of using classified proteins rather than all proteins.
Few-shot classification consists of a training phase where a model is learned on a relatively large dataset and an adaptation phase where the learned model is adapted to previously-unseen tasks with limited labeled samples. In this paper, we empirically prove that the training algorithm and the adaptation algorithm can be completely disentangled, which allows algorithm analysis and design to be done individually for each phase. Our meta-analysis for each phase reveals several interesting insights that may help better understand key aspects of few-shot classification and connections with other fields such as visual representation learning and transfer learning. We hope the insights and research challenges revealed in this paper can inspire future work in related directions. Code and pre-trained models (in PyTorch) are available at https://github.com/Frankluox/CloserLookAgainFewShot.
Prompting approaches have been recently explored in text style transfer, where a textual prompt is used to query a pretrained language model to generate style-transferred texts word by word in an autoregressive manner. However, such a generation process is less controllable and early prediction errors may affect future word predictions. In this paper, we present a prompt-based editing approach for text style transfer. Specifically, we prompt a pretrained language model for style classification and use the classification probability to compute a style score. Then, we perform discrete search with word-level editing to maximize a comprehensive scoring function for the style-transfer task. In this way, we transform a prompt-based generation problem into a classification one, which is a training-free process and more controllable than the autoregressive generation of sentences. In our experiments, we performed both automatic and human evaluation on three style-transfer benchmark datasets, and show that our approach largely outperforms the state-of-the-art systems that have 20 times more parameters. Additional empirical analyses further demonstrate the effectiveness of our approach.
Deep learning models such as CNNs have surpassed human performance in computer vision tasks such as image classification. However, despite their sophistication, these models lack interpretability which can lead to biased outcomes reflecting existing prejudices in the data. We aim to make predictions made by a CNN interpretable. Hence, we present a novel framework called NeSyFOLD to create a neurosymbolic (NeSy) model for image classification tasks. The model is a CNN with all layers following the last convolutional layer replaced by a stratified answer set program (ASP). A rule-based machine learning algorithm called FOLD-SE-M is used to derive the stratified answer set program from binarized filter activations of the last convolutional layer. The answer set program can be viewed as a rule-set, wherein the truth value of each predicate depends on the activation of the corresponding kernel in the CNN. The rule-set serves as a global explanation for the model and is interpretable. A justification for the predictions made by the NeSy model can be obtained using an ASP interpreter. We also use our NeSyFOLD framework with a CNN that is trained using a sparse kernel learning technique called Elite BackProp (EBP). This leads to a significant reduction in rule-set size without compromising accuracy or fidelity thus improving scalability of the NeSy model and interpretability of its rule-set. Evaluation is done on datasets with varied complexity and sizes. To make the rule-set more intuitive to understand, we propose a novel algorithm for labelling each kernel's corresponding predicate in the rule-set with the semantic concept(s) it learns. We evaluate the performance of our "semantic labelling algorithm" to quantify the efficacy of the semantic labelling for both the NeSy model and the NeSy-EBP model.
Automatic modulation classification is a desired feature in many modern software-defined radios. In recent years, a number of convolutional deep learning architectures have been proposed for automatically classifying the modulation used on observed signal bursts. However, a comprehensive analysis of these differing architectures and importance of each design element has not been carried out. Thus it is unclear what tradeoffs the differing designs of these convolutional neural networks might have. In this research, we investigate numerous architectures for automatic modulation classification and perform a comprehensive ablation study to investigate the impacts of varying hyperparameters and design elements on automatic modulation classification performance. We show that a new state of the art in performance can be achieved using a subset of the studied design elements. In particular, we show that a combination of dilated convolutions, statistics pooling, and squeeze-and-excitation units results in the strongest performing classifier. We further investigate this best performer according to various other criteria, including short signal bursts, common misclassifications, and performance across differing modulation categories and modes.
The domain adaptation (DA) approaches available to date are usually not well suited for practical DA scenarios of remote sensing image classification, since these methods (such as unsupervised DA) rely on rich prior knowledge about the relationship between label sets of source and target domains, and source data are often not accessible due to privacy or confidentiality issues. To this end, we propose a practical universal domain adaptation setting for remote sensing image scene classification that requires no prior knowledge on the label sets. Furthermore, a novel universal domain adaptation method without source data is proposed for cases when the source data is unavailable. The architecture of the model is divided into two parts: the source data generation stage and the model adaptation stage. The first stage estimates the conditional distribution of source data from the pre-trained model using the knowledge of class-separability in the source domain and then synthesizes the source data. With this synthetic source data in hand, it becomes a universal DA task to classify a target sample correctly if it belongs to any category in the source label set, or mark it as ``unknown" otherwise. In the second stage, a novel transferable weight that distinguishes the shared and private label sets in each domain promotes the adaptation in the automatically discovered shared label set and recognizes the ``unknown'' samples successfully. Empirical results show that the proposed model is effective and practical for remote sensing image scene classification, regardless of whether the source data is available or not. The code is available at https://github.com/zhu-xlab/UniDA.
Variance in predictions across different trained models is a significant, under-explored source of error in fair binary classification. In practice, the variance on some data examples is so large that decisions can be effectively arbitrary. To investigate this problem, we take an experimental approach and make four overarching contributions: We: 1) Define a metric called self-consistency, derived from variance, which we use as a proxy for measuring and reducing arbitrariness; 2) Develop an ensembling algorithm that abstains from classification when a prediction would be arbitrary; 3) Conduct the largest to-date empirical study of the role of variance (vis-a-vis self-consistency and arbitrariness) in fair binary classification; and, 4) Release a toolkit that makes the US Home Mortgage Disclosure Act (HMDA) datasets easily usable for future research. Altogether, our experiments reveal shocking insights about the reliability of conclusions on benchmark datasets. Most fair binary classification benchmarks are close-to-fair when taking into account the amount of arbitrariness present in predictions -- before we even try to apply any fairness interventions. This finding calls into question the practical utility of common algorithmic fairness methods, and in turn suggests that we should reconsider how we choose to measure fairness in binary classification.
Most classification models treat all misclassifications equally. However, different classes may be related, and these hierarchical relationships must be considered in some classification problems. These problems can be addressed by using hierarchical information during training. Unfortunately, this information is not available for all datasets. Many classification-based metric learning methods use class representatives in embedding space to represent different classes. The relationships among the learned class representatives can then be used to estimate class hierarchical structures. If we have a predefined class hierarchy, the learned class representatives can be assessed to determine whether the metric learning model learned semantic distances that match our prior knowledge. In this work, we train a softmax classifier and three metric learning models with several training options on benchmark and real-world datasets. In addition to the standard classification accuracy, we evaluate the hierarchical inference performance by inspecting learned class representatives and the hierarchy-informed performance, i.e., the classification performance, and the metric learning performance by considering predefined hierarchical structures. Furthermore, we investigate how the considered measures are affected by various models and training options. When our proposed ProxyDR model is trained without using predefined hierarchical structures, the hierarchical inference performance is significantly better than that of the popular NormFace model. Additionally, our model enhances some hierarchy-informed performance measures under the same training options. We also found that convolutional neural networks (CNNs) with random weights correspond to the predefined hierarchies better than random chance.