Bilevel optimization is an important formulation for many machine learning problems. Current bilevel optimization algorithms assume that the gradient of the upper-level function is Lipschitz. However, recent studies reveal that certain neural networks such as recurrent neural networks (RNNs) and long-short-term memory networks (LSTMs) exhibit potential unbounded smoothness, rendering conventional bilevel optimization algorithms unsuitable. In this paper, we design a new bilevel optimization algorithm, namely BO-REP, to address this challenge. This algorithm updates the upper-level variable using normalized momentum and incorporates two novel techniques for updating the lower-level variable: \textit{initialization refinement} and \textit{periodic updates}. Specifically, once the upper-level variable is initialized, a subroutine is invoked to obtain a refined estimate of the corresponding optimal lower-level variable, and the lower-level variable is updated only after every specific period instead of each iteration. When the upper-level problem is nonconvex and unbounded smooth, and the lower-level problem is strongly convex, we prove that our algorithm requires $\widetilde{\mathcal{O}}(1/\epsilon^4)$ iterations to find an $\epsilon$-stationary point in the stochastic setting, where each iteration involves calling a stochastic gradient or Hessian-vector product oracle. Notably, this result matches the state-of-the-art complexity results under the bounded smoothness setting and without mean-squared smoothness of the stochastic gradient, up to logarithmic factors. Our proof relies on novel technical lemmas for the periodically updated lower-level variable, which are of independent interest. Our experiments on hyper-representation learning, hyperparameter optimization, and data hyper-cleaning for text classification tasks demonstrate the effectiveness of our proposed algorithm.
Hyperparameters of Deep Learning (DL) pipelines are crucial for their downstream performance. While a large number of methods for Hyperparameter Optimization (HPO) have been developed, their incurred costs are often untenable for modern DL. Consequently, manual experimentation is still the most prevalent approach to optimize hyperparameters, relying on the researcher's intuition, domain knowledge, and cheap preliminary explorations. To resolve this misalignment between HPO algorithms and DL researchers, we propose PriorBand, an HPO algorithm tailored to DL, able to utilize both expert beliefs and cheap proxy tasks. Empirically, we demonstrate PriorBand's efficiency across a range of DL benchmarks and show its gains under informative expert input and robustness against poor expert beliefs
This paper explores the use of foundational large language models (LLMs) in hyperparameter optimization (HPO). Hyperparameters are critical in determining the effectiveness of machine learning models, yet their optimization often relies on manual approaches in limited-budget settings. By prompting LLMs with dataset and model descriptions, we develop a methodology where LLMs suggest hyperparameter configurations, which are iteratively refined based on model performance. Our empirical evaluations on standard benchmarks reveal that within constrained search budgets, LLMs can match or outperform traditional HPO methods like Bayesian optimization across different models on standard benchmarks. Furthermore, we propose to treat the code specifying our model as a hyperparameter, which the LLM outputs and affords greater flexibility than existing HPO approaches.
Through additional training, we explore embedding specialized scientific knowledge into the Llama 2 Large Language Model (LLM). Key findings reveal that effective knowledge integration requires reading texts from multiple perspectives, especially in instructional formats. We utilize text augmentation to tackle the scarcity of specialized texts, including style conversions and translations. Hyperparameter optimization proves crucial, with different size models (7b, 13b, and 70b) reasonably undergoing additional training. Validating our methods, we construct a dataset of 65,000 scientific papers. Although we have succeeded in partially embedding knowledge, the study highlights the complexities and limitations of incorporating specialized information into LLMs, suggesting areas for further improvement.
We introduce TabRepo, a new dataset of tabular model evaluations and predictions. TabRepo contains the predictions and metrics of 1310 models evaluated on 200 classification and regression datasets. We illustrate the benefit of our dataset in multiple ways. First, we show that it allows to perform analysis such as comparing Hyperparameter Optimization against current AutoML systems while also considering ensembling at marginal cost by using precomputed model predictions. Second, we show that our dataset can be readily leveraged to perform transfer-learning. In particular, we show that applying standard transfer-learning techniques allows to outperform current state-of-the-art tabular systems in accuracy, runtime and latency.
We propose principled Gaussian processes (GPs) for modeling functions defined over the edge set of a simplicial 2-complex, a structure similar to a graph in which edges may form triangular faces. This approach is intended for learning flow-type data on networks where edge flows can be characterized by the discrete divergence and curl. Drawing upon the Hodge decomposition, we first develop classes of divergence-free and curl-free edge GPs, suitable for various applications. We then combine them to create \emph{Hodge-compositional edge GPs} that are expressive enough to represent any edge function. These GPs facilitate direct and independent learning for the different Hodge components of edge functions, enabling us to capture their relevance during hyperparameter optimization. To highlight their practical potential, we apply them for flow data inference in currency exchange, ocean currents and water supply networks, comparing them to alternative models.
Training and inference in Gaussian processes (GPs) require solving linear systems with $n\times n$ kernel matrices. To address the prohibitive $\mathcal{O}(n^3)$ time complexity, recent work has employed fast iterative methods, like conjugate gradients (CG). However, as datasets increase in magnitude, the kernel matrices become increasingly ill-conditioned and still require $\mathcal{O}(n^2)$ space without partitioning. Thus, while CG increases the size of datasets GPs can be trained on, modern datasets reach scales beyond its applicability. In this work, we propose an iterative method which only accesses subblocks of the kernel matrix, effectively enabling mini-batching. Our algorithm, based on alternating projection, has $\mathcal{O}(n)$ per-iteration time and space complexity, solving many of the practical challenges of scaling GPs to very large datasets. Theoretically, we prove the method enjoys linear convergence. Empirically, we demonstrate its fast convergence in practice and robustness to ill-conditioning. On large-scale benchmark datasets with up to four million data points, our approach accelerates GP training and inference by speed-up factors up to $27\times$ and $72 \times$, respectively, compared to CG.
Reinforcement learning (RL) has emerged as a powerful approach for tackling complex problems. The recent introduction of multi-objective reinforcement learning (MORL) has further expanded the scope of RL by enabling agents to make trade-offs among multiple objectives. This advancement not only has broadened the range of problems that can be tackled but also created numerous opportunities for exploration and advancement. Yet, the effectiveness of RL agents heavily relies on appropriately setting their hyperparameters. In practice, this task often proves to be challenging, leading to unsuccessful deployments of these techniques in various instances. Hence, prior research has explored hyperparameter optimization in RL to address this concern. This paper presents an initial investigation into the challenge of hyperparameter optimization specifically for MORL. We formalize the problem, highlight its distinctive challenges, and propose a systematic methodology to address it. The proposed methodology is applied to a well-known environment using a state-of-the-art MORL algorithm, and preliminary results are reported. Our findings indicate that the proposed methodology can effectively provide hyperparameter configurations that significantly enhance the performance of MORL agents. Furthermore, this study identifies various future research opportunities to further advance the field of hyperparameter optimization for MORL.
Evaluating the adversarial robustness of machine learning models using gradient-based attacks is challenging. In this work, we show that hyperparameter optimization can improve fast minimum-norm attacks by automating the selection of the loss function, the optimizer and the step-size scheduler, along with the corresponding hyperparameters. Our extensive evaluation involving several robust models demonstrates the improved efficacy of fast minimum-norm attacks when hyper-up with hyperparameter optimization. We release our open-source code at https://github.com/pralab/HO-FMN.
Classical machine learning models, such as linear models and tree-based models, are widely used in industry. These models are sensitive to data distribution, thus feature preprocessing, which transforms features from one distribution to another, is a crucial step to ensure good model quality. Manually constructing a feature preprocessing pipeline is challenging because data scientists need to make difficult decisions about which preprocessors to select and in which order to compose them. In this paper, we study how to automate feature preprocessing (Auto-FP) for tabular data. Due to the large search space, a brute-force solution is prohibitively expensive. To address this challenge, we interestingly observe that Auto-FP can be modelled as either a hyperparameter optimization (HPO) or a neural architecture search (NAS) problem. This observation enables us to extend a variety of HPO and NAS algorithms to solve the Auto-FP problem. We conduct a comprehensive evaluation and analysis of 15 algorithms on 45 public ML datasets. Overall, evolution-based algorithms show the leading average ranking. Surprisingly, the random search turns out to be a strong baseline. Many surrogate-model-based and bandit-based search algorithms, which achieve good performance for HPO and NAS, do not outperform random search for Auto-FP. We analyze the reasons for our findings and conduct a bottleneck analysis to identify the opportunities to improve these algorithms. Furthermore, we explore how to extend Auto-FP to support parameter search and compare two ways to achieve this goal. In the end, we evaluate Auto-FP in an AutoML context and discuss the limitations of popular AutoML tools. To the best of our knowledge, this is the first study on automated feature preprocessing. We hope our work can inspire researchers to develop new algorithms tailored for Auto-FP.
Hyperparameter optimization (HPO) is important to leverage the full potential of machine learning (ML). In practice, users are often interested in multi-objective (MO) problems, i.e., optimizing potentially conflicting objectives, like accuracy and energy consumption. To tackle this, the vast majority of MO-ML algorithms return a Pareto front of non-dominated machine learning models to the user. Optimizing the hyperparameters of such algorithms is non-trivial as evaluating a hyperparameter configuration entails evaluating the quality of the resulting Pareto front. In literature, there are known indicators that assess the quality of a Pareto front (e.g., hypervolume, R2) by quantifying different properties (e.g., volume, proximity to a reference point). However, choosing the indicator that leads to the desired Pareto front might be a hard task for a user. In this paper, we propose a human-centered interactive HPO approach tailored towards multi-objective ML leveraging preference learning to extract desiderata from users that guide the optimization. Instead of relying on the user guessing the most suitable indicator for their needs, our approach automatically learns an appropriate indicator. Concretely, we leverage pairwise comparisons of distinct Pareto fronts to learn such an appropriate quality indicator. Then, we optimize the hyperparameters of the underlying MO-ML algorithm towards this learned indicator using a state-of-the-art HPO approach. In an experimental study targeting the environmental impact of ML, we demonstrate that our approach leads to substantially better Pareto fronts compared to optimizing based on a wrong indicator pre-selected by the user, and performs comparable in the case of an advanced user knowing which indicator to pick.
The recent Long-Range Graph Benchmark (LRGB, Dwivedi et al. 2022) introduced a set of graph learning tasks strongly dependent on long-range interaction between vertices. Empirical evidence suggests that on these tasks Graph Transformers significantly outperform Message Passing GNNs (MPGNNs). In this paper, we carefully reevaluate multiple MPGNN baselines as well as the Graph Transformer GPS (Ramp\'a\v{s}ek et al. 2022) on LRGB. Through a rigorous empirical analysis, we demonstrate that the reported performance gap is overestimated due to suboptimal hyperparameter choices. It is noteworthy that across multiple datasets the performance gap completely vanishes after basic hyperparameter optimization. In addition, we discuss the impact of lacking feature normalization for LRGB's vision datasets and highlight a spurious implementation of LRGB's link prediction metric. The principal aim of our paper is to establish a higher standard of empirical rigor within the graph machine learning community.
Machine learning has achieved remarkable success over the past couple of decades, often attributed to a combination of algorithmic innovations and the availability of high-quality data available at scale. However, a third critical component is the fine-tuning of hyperparameters, which plays a pivotal role in achieving optimal model performance. Despite its significance, hyperparameter optimization (HPO) remains a challenging task for several reasons. Many HPO techniques rely on naive search methods or assume that the loss function is smooth and continuous, which may not always be the case. Traditional methods, like grid search and Bayesian optimization, often struggle to quickly adapt and efficiently search the loss landscape. Grid search is computationally expensive, while Bayesian optimization can be slow to prime. Since the search space for HPO is frequently high-dimensional and non-convex, it is often challenging to efficiently find a global minimum. Moreover, optimal hyperparameters can be sensitive to the specific dataset or task, further complicating the search process. To address these issues, we propose a new hyperparameter optimization method, HomOpt, using a data-driven approach based on a generalized additive model (GAM) surrogate combined with homotopy optimization. This strategy augments established optimization methodologies to boost the performance and effectiveness of any given method with faster convergence to the optimum on continuous, discrete, and categorical domain spaces. We compare the effectiveness of HomOpt applied to multiple optimization techniques (e.g., Random Search, TPE, Bayes, and SMAC) showing improved objective performance on many standardized machine learning benchmarks and challenging open-set recognition tasks.
In this work, we show that simultaneously training and mixing neural networks is a promising way to conduct Neural Architecture Search (NAS). For hyperparameter optimization, reusing the partially trained weights allows for efficient search, as was previously demonstrated by the Population Based Training (PBT) algorithm. We propose PBT-NAS, an adaptation of PBT to NAS where architectures are improved during training by replacing poorly-performing networks in a population with the result of mixing well-performing ones and inheriting the weights using the shrink-perturb technique. After PBT-NAS terminates, the created networks can be directly used without retraining. PBT-NAS is highly parallelizable and effective: on challenging tasks (image generation and reinforcement learning) PBT-NAS achieves superior performance compared to baselines (random search and mutation-based PBT).
Hyperparameter optimization (HPO) is crucial for fine-tuning machine learning models but can be computationally expensive. To reduce costs, Multi-fidelity HPO (MF-HPO) leverages intermediate accuracy levels in the learning process and discards low-performing models early on. We compared various representative MF-HPO methods against a simple baseline on classical benchmark data. The baseline involved discarding all models except the Top-K after training for only one epoch, followed by further training to select the best model. Surprisingly, this baseline achieved similar results to its counterparts, while requiring an order of magnitude less computation. Upon analyzing the learning curves of the benchmark data, we observed a few dominant learning curves, which explained the success of our baseline. This suggests that researchers should (1) always use the suggested baseline in benchmarks and (2) broaden the diversity of MF-HPO benchmarks to include more complex cases.
We present a model-agnostic framework for jointly optimizing the predictive performance and interpretability of supervised machine learning models for tabular data. Interpretability is quantified via three measures: feature sparsity, interaction sparsity of features, and sparsity of non-monotone feature effects. By treating hyperparameter optimization of a machine learning algorithm as a multi-objective optimization problem, our framework allows for generating diverse models that trade off high performance and ease of interpretability in a single optimization run. Efficient optimization is achieved via augmentation of the search space of the learning algorithm by incorporating feature selection, interaction and monotonicity constraints into the hyperparameter search space. We demonstrate that the optimization problem effectively translates to finding the Pareto optimal set of groups of selected features that are allowed to interact in a model, along with finding their optimal monotonicity constraints and optimal hyperparameters of the learning algorithm itself. We then introduce a novel evolutionary algorithm that can operate efficiently on this augmented search space. In benchmark experiments, we show that our framework is capable of finding diverse models that are highly competitive or outperform state-of-the-art XGBoost or Explainable Boosting Machine models, both with respect to performance and interpretability.
As Transformer-based models have achieved impressive performance on various time series tasks, Long-Term Series Forecasting (LTSF) tasks have also received extensive attention in recent years. However, due to the inherent computational complexity and long sequences demanding of Transformer-based methods, its application on LTSF tasks still has two major issues that need to be further investigated: 1) Whether the sparse attention mechanism designed by these methods actually reduce the running time on real devices; 2) Whether these models need extra long input sequences to guarantee their performance? The answers given in this paper are negative. Therefore, to better copy with these two issues, we design a lightweight Period-Attention mechanism (Periodformer), which renovates the aggregation of long-term subseries via explicit periodicity and short-term subseries via built-in proximity. Meanwhile, a gating mechanism is embedded into Periodformer to regulate the influence of the attention module on the prediction results. Furthermore, to take full advantage of GPUs for fast hyperparameter optimization (e.g., finding the suitable input length), a Multi-GPU Asynchronous parallel algorithm based on Bayesian Optimization (MABO) is presented. MABO allocates a process to each GPU via a queue mechanism, and then creates multiple trials at a time for asynchronous parallel search, which greatly reduces the search time. Compared with the state-of-the-art methods, the prediction error of Periodformer reduced by 13% and 26% for multivariate and univariate forecasting, respectively. In addition, MABO reduces the average search time by 46% while finding better hyperparameters. As a conclusion, this paper indicates that LTSF may not need complex attention and extra long input sequences. The code has been open sourced on Github.
Approximate inference in Gaussian process (GP) models with non-conjugate likelihoods gets entangled with the learning of the model hyperparameters. We improve hyperparameter learning in GP models and focus on the interplay between variational inference (VI) and the learning target. While VI's lower bound to the marginal likelihood is a suitable objective for inferring the approximate posterior, we show that a direct approximation of the marginal likelihood as in Expectation Propagation (EP) is a better learning objective for hyperparameter optimization. We design a hybrid training procedure to bring the best of both worlds: it leverages conjugate-computation VI for inference and uses an EP-like marginal likelihood approximation for hyperparameter learning. We compare VI, EP, Laplace approximation, and our proposed training procedure and empirically demonstrate the effectiveness of our proposal across a wide range of data sets.
Selecting hyperparameters in deep learning greatly impacts its effectiveness but requires manual effort and expertise. Recent works show that Bayesian model selection with Laplace approximations can allow to optimize such hyperparameters just like standard neural network parameters using gradients and on the training data. However, estimating a single hyperparameter gradient requires a pass through the entire dataset, limiting the scalability of such algorithms. In this work, we overcome this issue by introducing lower bounds to the linearized Laplace approximation of the marginal likelihood. In contrast to previous estimators, these bounds are amenable to stochastic-gradient-based optimization and allow to trade off estimation accuracy against computational complexity. We derive them using the function-space form of the linearized Laplace, which can be estimated using the neural tangent kernel. Experimentally, we show that the estimators can significantly accelerate gradient-based hyperparameter optimization.
Population Based Training (PBT) is an efficient hyperparameter optimization algorithm. PBT is a single-objective algorithm, but many real-world hyperparameter optimization problems involve two or more conflicting objectives. In this work, we therefore introduce a multi-objective version of PBT, MO-PBT. Our experiments on diverse multi-objective hyperparameter optimization problems (Precision/Recall, Accuracy/Fairness, Accuracy/Adversarial Robustness) show that MO-PBT outperforms random search, single-objective PBT, and the state-of-the-art multi-objective hyperparameter optimization algorithm MO-ASHA.