Large language models of code (Code-LLMs) have recently brought tremendous advances to code completion, a fundamental feature of programming assistance and code intelligence. However, most existing works ignore the possible presence of bugs in the code context for generation, which are inevitable in software development. Therefore, we introduce and study the buggy-code completion problem, inspired by the realistic scenario of real-time code suggestion where the code context contains potential bugs -- anti-patterns that can become bugs in the completed program. To systematically study the task, we introduce two datasets: one with synthetic bugs derived from semantics-altering operator changes (buggy-HumanEval) and one with realistic bugs derived from user submissions to coding problems (buggy-FixEval). We find that the presence of potential bugs significantly degrades the generation performance of the high-performing Code-LLMs. For instance, the passing rates of CODEGEN-2B-MONO on test cases of buggy-HumanEval drop more than 50% given a single potential bug in the context. Finally, we investigate several post-hoc methods for mitigating the adverse effect of potential bugs and find that there remains a significant gap in post-mitigation performance.
Large Language Models (LLMs) have greatly advanced code auto-completion systems, with a potential for substantial productivity enhancements for developers. However, current benchmarks mainly focus on single-file tasks, leaving an assessment gap for more complex, real-world, multi-file programming scenarios. To fill this gap, we introduce RepoBench, a new benchmark specifically designed for evaluating repository-level code auto-completion systems. RepoBench supports both Python and Java and consists of three interconnected evaluation tasks: RepoBench-R (Retrieval), RepoBench-C (Code Completion), and RepoBench-P (Pipeline). Each task respectively measures the system's ability to retrieve the most relevant code snippets from other files as cross-file context, predict the next line of code with cross-file and in-file context, and handle complex tasks that require a combination of both retrieval and next-line prediction. RepoBench aims to facilitate a more complete comparison of performance and encouraging continuous improvement in auto-completion systems. RepoBench is publicly available at https://github.com/Leolty/repobench.
Security vulnerability repair is a difficult task that is in dire need of automation. Two groups of techniques have shown promise: (1) large code language models (LLMs) that have been pre-trained on source code for tasks such as code completion, and (2) automated program repair (APR) techniques that use deep learning (DL) models to automatically fix software bugs. This paper is the first to study and compare Java vulnerability repair capabilities of LLMs and DL-based APR models. The contributions include that we (1) apply and evaluate five LLMs (Codex, CodeGen, CodeT5, PLBART and InCoder), four fine-tuned LLMs, and four DL-based APR techniques on two real-world Java vulnerability benchmarks (Vul4J and VJBench), (2) design code transformations to address the training and test data overlapping threat to Codex, (3) create a new Java vulnerability repair benchmark VJBench, and its transformed version VJBench-trans and (4) evaluate LLMs and APR techniques on the transformed vulnerabilities in VJBench-trans. Our findings include that (1) existing LLMs and APR models fix very few Java vulnerabilities. Codex fixes 10.2 (20.4%), the most number of vulnerabilities. (2) Fine-tuning with general APR data improves LLMs' vulnerability-fixing capabilities. (3) Our new VJBench reveals that LLMs and APR models fail to fix many Common Weakness Enumeration (CWE) types, such as CWE-325 Missing cryptographic step and CWE-444 HTTP request smuggling. (4) Codex still fixes 8.3 transformed vulnerabilities, outperforming all the other LLMs and APR models on transformed vulnerabilities. The results call for innovations to enhance automated Java vulnerability repair such as creating larger vulnerability repair training data, tuning LLMs with such data, and applying code simplification transformation to facilitate vulnerability repair.
The drastic increase in language models' parameters has led to a new trend of deploying models in cloud servers, raising growing concerns about private inference for Transformer-based models. Existing two-party privacy-preserving techniques, however, only take into account natural language understanding (NLU) scenarios. Private inference in natural language generation (NLG), crucial for applications like translation and code completion, remains underexplored.In addition, previous privacy-preserving techniques suffer from convergence issues during model training and exhibit poor inference speed when used with NLG models due to the neglect of time-consuming operations in auto-regressive generations. To address these issues, we propose a fast private text generation framework for Transformer-based language models, namely MERGE.MERGE reuses the output hidden state as the word embedding to bypass the embedding computation and reorganize the linear operations in the Transformer module to accelerate the forward procedure. Extensive experiments show that MERGE achieves a 26.5x speedup to the vanilla encrypted model under the sequence length 512, and reduces 80\% communication cost, with an up to 10x speedup to state-of-the-art approximated models.
Message Passing Interface (MPI) plays a crucial role in distributed memory parallelization across multiple nodes. However, parallelizing MPI code manually, and specifically, performing domain decomposition, is a challenging, error-prone task. In this paper, we address this problem by developing MPI-RICAL, a novel data-driven, programming-assistance tool that assists programmers in writing domain decomposition based distributed memory parallelization code. Specifically, we train a supervised language model to suggest MPI functions and their proper locations in the code on the fly. We also introduce MPICodeCorpus, the first publicly available corpus of MPI-based parallel programs that is created by mining more than 15,000 open-source repositories on GitHub. Experimental results have been done on MPICodeCorpus and more importantly, on a compiled benchmark of MPI-based parallel programs for numerical computations that represent real-world scientific applications. MPI-RICAL achieves F1 scores between 0.87-0.91 on these programs, demonstrating its accuracy in suggesting correct MPI functions at appropriate code locations.. The source code used in this work, as well as other relevant sources, are available at: https://github.com/Scientific-Computing-Lab-NRCN/MPI-rical
Large language models (LLMs) pretrained on vast source code have achieved prominent progress in code intelligence. However, existing code LLMs have two main limitations in terms of architecture and pretraining tasks. First, they often adopt a specific architecture (encoder-only or decoder-only) or rely on a unified encoder-decoder network for different downstream tasks. The former paradigm is limited by inflexibility in applications while in the latter, the model is treated as a single system for all tasks, leading to suboptimal performance on a subset of tasks. Secondly, they often employ a limited set of pretraining objectives which might not be relevant to some downstream tasks and hence result in substantial performance degrade. To address these limitations, we propose ``CodeT5+'', a family of encoder-decoder LLMs for code in which component modules can be flexibly combined to suit a wide range of downstream code tasks. Such flexibility is enabled by our proposed mixture of pretraining objectives to mitigate the pretrain-finetune discrepancy. These objectives cover span denoising, contrastive learning, text-code matching, and causal LM pretraining tasks, on both unimodal and bimodal multilingual code corpora. Furthermore, we propose to initialize CodeT5+ with frozen off-the-shelf LLMs without training from scratch to efficiently scale up our models, and explore instruction-tuning to align with natural language instructions. We extensively evaluate CodeT5+ on over 20 code-related benchmarks in different settings, including zero-shot, finetuning, and instruction-tuning. We observe state-of-the-art (SoTA) model performance on various code-related tasks, such as code generation and completion, math programming, and text-to-code retrieval tasks. Particularly, our instruction-tuned CodeT5+ 16B achieves new SoTA results on HumanEval code generation task against other open code LLMs.
Transformer-based pre-trained models have recently achieved great results in solving many software engineering tasks including automatic code completion which is a staple in a developer's toolkit. While many have striven to improve the code-understanding abilities of such models, the opposite -- making the code easier to understand -- has not been properly investigated. In this study, we aim to answer whether making code easier to understand through using contextual data improves the performance of pre-trained code language models for the task of code completion. We consider type annotations and comments as two common forms of additional contextual information that often help developers understand code better. For the experiments, we study code completion in two granularity levels; token and line completion and take three recent and large-scale language models for source code: UniXcoder, CodeGPT, and InCoder with five evaluation metrics. Finally, we perform the Wilcoxon Signed Rank test to gauge significance and measure the effect size. Contrary to our expectations, all models perform better if type annotations are removed (albeit the effect sizes are small). For comments, we find that the models perform better in the presence of multi-line comments (again with small effect sizes). Based on our observations, we recommend making proper design choices when training, fine-tuning, or simply selecting such models given the intended data and application. Better evaluations and multi-modal techniques can also be further investigated to improve the practicality and accuracy of auto-completions.
Current generative knowledge graph construction approaches usually fail to capture structural knowledge by simply flattening natural language into serialized texts or a specification language. However, large generative language model trained on structured data such as code has demonstrated impressive capability in understanding natural language for structural prediction and reasoning tasks. Intuitively, we address the task of generative knowledge graph construction with code language model: given a code-format natural language input, the target is to generate triples which can be represented as code completion tasks. Specifically, we develop schema-aware prompts that effectively utilize the semantic structure within the knowledge graph. As code inherently possesses structure, such as class and function definitions, it serves as a useful model for prior semantic structural knowledge. Furthermore, we employ a rationale-enhanced generation method to boost the performance. Rationales provide intermediate steps, thereby improving knowledge extraction abilities. Experimental results indicate that the proposed approach can obtain better performance on benchmark datasets compared with baselines. Code and datasets are available in https://github.com/zjunlp/DeepKE/tree/main/example/llm.
The task of repository-level code completion is to continue writing the unfinished code based on a broader context of the repository. While for automated code completion tools, it is difficult to utilize the useful information scattered in different files. We propose RepoCoder, a simple, generic, and effective framework to address the challenge. It streamlines the repository-level code completion process by incorporating a similarity-based retriever and a pre-trained code language model in an iterative retrieval-generation pipeline. RepoCoder makes effective utilization of repository-level information for code completion and has the ability to generate code at various levels of granularity. Moreover, we propose a new benchmark RepoEval, which consists of the latest and high-quality real-world repositories covering line, API invocation, and function body completion scenarios. Experimental results indicate that RepoCoder significantly improves the In-File completion baseline by over 10% in all settings and consistently outperforms the vanilla retrieval-augmented code completion approach. Furthermore, we validate the effectiveness of RepoCoder through comprehensive analysis, providing valuable insights for future research. Our source code and benchmark are publicly available: https://github.com/microsoft/CodeT/tree/main/RepoCoder
Large Language Models (LLMs) like Codex are powerful tools for performing code completion and code generation tasks as they are trained on billions of lines of code from publicly available sources. Moreover, these models are capable of generating code snippets from Natural Language (NL) descriptions by learning languages and programming practices from public GitHub repositories. Although LLMs promise an effortless NL-driven deployment of software applications, the security of the code they generate has not been extensively investigated nor documented. In this work, we present LLMSecEval, a dataset containing 150 NL prompts that can be leveraged for assessing the security performance of such models. Such prompts are NL descriptions of code snippets prone to various security vulnerabilities listed in MITRE's Top 25 Common Weakness Enumeration (CWE) ranking. Each prompt in our dataset comes with a secure implementation example to facilitate comparative evaluations against code produced by LLMs. As a practical application, we show how LLMSecEval can be used for evaluating the security of snippets automatically generated from NL descriptions.
Large Language Models (LLMs) are increasingly being integrated into various applications. The functionalities of recent LLMs can be flexibly modulated via natural language prompts. This renders them susceptible to targeted adversarial prompting, e.g., Prompt Injection (PI) attacks enable attackers to override original instructions and employed controls. So far, it was assumed that the user is directly prompting the LLM. But, what if it is not the user prompting? We argue that LLM-Integrated Applications blur the line between data and instructions. We reveal new attack vectors, using Indirect Prompt Injection, that enable adversaries to remotely (without a direct interface) exploit LLM-integrated applications by strategically injecting prompts into data likely to be retrieved. We derive a comprehensive taxonomy from a computer security perspective to systematically investigate impacts and vulnerabilities, including data theft, worming, information ecosystem contamination, and other novel security risks. We demonstrate our attacks' practical viability against both real-world systems, such as Bing's GPT-4 powered Chat and code-completion engines, and synthetic applications built on GPT-4. We show how processing retrieved prompts can act as arbitrary code execution, manipulate the application's functionality, and control how and if other APIs are called. Despite the increasing integration and reliance on LLMs, effective mitigations of these emerging threats are currently lacking. By raising awareness of these vulnerabilities and providing key insights into their implications, we aim to promote the safe and responsible deployment of these powerful models and the development of robust defenses that protect users and systems from potential attacks.
Writing tests is a time-consuming yet essential task during software development. We propose to leverage recent advances in deep learning for text and code generation to assist developers in writing tests. We formalize the novel task of test completion to automatically complete the next statement in a test method based on the context of prior statements and the code under test. We develop TeCo -- a deep learning model using code semantics for test completion. The key insight underlying TeCo is that predicting the next statement in a test method requires reasoning about code execution, which is hard to do with only syntax-level data that existing code completion models use. TeCo extracts and uses six kinds of code semantics data, including the execution result of prior statements and the execution context of the test method. To provide a testbed for this new task, as well as to evaluate TeCo, we collect a corpus of 130,934 test methods from 1,270 open-source Java projects. Our results show that TeCo achieves an exact-match accuracy of 18, which is 29% higher than the best baseline using syntax-level data only. When measuring functional correctness of generated next statement, TeCo can generate runnable code in 29% of the cases compared to 18% obtained by the best baseline. Moreover, TeCo is significantly better than prior work on test oracle generation.
Transformers have gained popularity in the software engineering (SE) literature. These deep learning models are usually pre-trained through a self-supervised objective, meant to provide the model with basic knowledge about a language of interest (e.g., Java). A classic pre-training objective is the masked language model (MLM), in which a percentage of tokens from the input (e.g., a Java method) is masked, with the model in charge of predicting them. Once pre-trained, the model is then fine-tuned to support the specific downstream task of interest (e.g., code summarization). While there is evidence suggesting the boost in performance provided by pre-training, little is known about the impact of the specific pre-training objective(s) used. Indeed, MLM is just one of the possible pre-training objectives and recent work from the natural language processing field suggest that pre-training objectives tailored for the specific downstream task of interest may substantially boost the model's performance. In this study, we focus on the impact of pre-training objectives on the performance of transformers when automating code-related tasks. We start with a systematic literature review aimed at identifying the pre-training objectives used in SE. Then, we pre-train 32 transformers using both (i) generic pre-training objectives usually adopted in SE; and (ii) pre-training objectives tailored to specific code-related tasks subject of our experimentation, namely bug-fixing, code summarization, and code completion. We also compare the pre-trained models with non pre-trained ones. Our results show that: (i) pre-training helps in boosting performance only if the amount of fine-tuning data available is small; (ii) the MLM objective is usually sufficient to maximize the prediction performance of the model, even when comparing it with pre-training objectives specialized for the downstream task at hand.
The utilization of programming language (PL) models, pre-trained on large-scale code corpora, as a means of automating software engineering processes has demonstrated considerable potential in streamlining various code generation tasks such as code completion, code translation, and program synthesis. However, current approaches mainly rely on supervised fine-tuning objectives borrowed from text generation, neglecting unique sequence-level characteristics of code, including but not limited to compilability as well as syntactic and functional correctness. To address this limitation, we propose PPOCoder, a new framework for code generation that synergistically combines pre-trained PL models with Proximal Policy Optimization (PPO) which is a widely used deep reinforcement learning technique. By utilizing non-differentiable feedback from code execution and structure alignment, PPOCoder seamlessly integrates external code-specific knowledge into the model optimization process. It's important to note that PPOCoder is a task-agnostic and model-agnostic framework that can be used across different code generation tasks and PLs. Extensive experiments on three code generation tasks demonstrate the effectiveness of our proposed approach compared to SOTA methods, achieving significant improvements in compilation success rates and functional correctness across different PLs.
While pre-trained language models (LM) for code have achieved great success in code completion, they generate code conditioned only on the contents within the file, i.e., in-file context, but ignore the rich semantics in other files within the same project, i.e., cross-file context, a critical source of information that is especially useful in modern modular software development. Such overlooking constrains code language models' capacity in code completion, leading to unexpected behaviors such as generating hallucinated class member functions or function calls with unexpected arguments. In this work, we develop a cross-file context finder tool, CCFINDER, that effectively locates and retrieves the most relevant cross-file context. We propose CoCoMIC, a framework that incorporates cross-file context to learn the in-file and cross-file context jointly on top of pretrained code LMs. CoCoMIC successfully improves the existing code LM with a 33.94% relative increase in exact match and a 28.69% relative increase in identifier matching for code completion when the cross-file context is provided.
Code completion aims to help improve developers' productivity by suggesting the next code tokens from a given context. Various approaches have been proposed to incorporate abstract syntax tree (AST) information for model training, ensuring that code completion is aware of the syntax of the programming languages. However, existing syntax-aware code completion approaches are not on-the-fly, as we found that for every two-thirds of characters that developers type, AST fails to be extracted because it requires the syntactically correct source code, limiting its practicality in real-world scenarios. On the other hand, existing on-the-fly code completion does not consider syntactic information yet. In this paper, we propose PyCoder to leverage token types, a kind of lightweight syntactic information, which is readily available and aligns with the natural order of source code. Our PyCoder is trained in a multi-task training manner so that by learning the supporting task of predicting token types during the training phase, the models achieve better performance on predicting tokens and lines of code without the need for token types in the inference phase. Comprehensive experiments show that PyCoder achieves the first rank on the CodeXGLUE leaderboard with an accuracy of 77.12% for the token-level predictions, which is 0.43%-24.25% more accurate than baselines. In addition, PyCoder achieves an exact match of 43.37% for the line-level predictions, which is 3.63%-84.73% more accurate than baselines. These results lead us to conclude that token type information (an alternative to syntactic information) that is rarely used in the past can greatly improve the performance of code completion approaches, without requiring the syntactically correct source code like AST-based approaches do. Our PyCoder is publicly available on HuggingFace and GitHub.
We present new benchmarks on evaluation code generation models: MBXP and Multilingual HumanEval, and MathQA-X. These datasets cover over 10 programming languages and are generated using a scalable conversion framework that transpiles prompts and test cases from the original Python datasets into the corresponding data in the target language. Using these benchmarks, we are able to assess the performance of code generation models in a multi-lingual fashion, and discovered generalization ability of language models on out-of-domain languages, advantages of multi-lingual models over mono-lingual, the ability of few-shot prompting to teach the model new languages, and zero-shot translation abilities even on mono-lingual settings. Furthermore, we use our code generation model to perform large-scale bootstrapping to obtain synthetic canonical solutions in several languages, which can be used for other code-related evaluations such as code insertion, robustness, or summarization tasks. Overall, our benchmarks represents a significant step towards a deeper understanding of language models' code generation abilities. We publicly release our code and datasets at https://github.com/amazon-research/mxeval.
Code-recommendation systems, such as Copilot and CodeWhisperer, have the potential to improve programmer productivity by suggesting and auto-completing code. However, to fully realize their potential, we must understand how programmers interact with these systems and identify ways to improve that interaction. To seek insights about human-AI collaboration with code recommendations systems, we studied GitHub Copilot, a code-recommendation system used by millions of programmers daily. We developed CUPS, a taxonomy of common programmer activities when interacting with Copilot. Our study of 21 programmers, who completed coding tasks and retrospectively labeled their sessions with CUPS, showed that CUPS can help us understand how programmers interact with code-recommendation systems, revealing inefficiencies and time costs. Our insights reveal how programmers interact with Copilot and motivate new interface designs and metrics.
Currently, large pre-trained language models are widely applied in neural code completion systems. Though large code models significantly outperform their smaller counterparts, around 70\% of displayed code completions from Github Copilot are not accepted by developers. Being reviewed but not accepted, their help to developer productivity is considerably limited and may conversely aggravate the workload of developers, as the code completions are automatically and actively generated in state-of-the-art code completion systems as developers type out once the service is enabled. Even worse, considering the high cost of the large code models, it is a huge waste of computing resources and energy, which severely goes against the sustainable development principle of AI technologies. However, such waste has never been realized, not to mention effectively addressed, in the research community for neural code completion. Hence, preventing such unhelpful code completions from happening in a cost-friendly way is of urgent need. To fill this significant gap, we first investigate the prompts of unhelpful code completions, called "low-return prompts". We empirically identify four observable patterns in low-return prompts, each lacking necessary information, making it difficult to address through enhancements to the model's accuracy alone. This demonstrates the feasibility of identifying such low-return prompts based on the prompts themselves. Motivated by this finding, we propose an early-rejection mechanism to turn down low-return prompts by foretelling the code completion qualities. The prompts that are estimated to receive unhelpful code completions will not be sent to the model. Furthermore, we investigated five types of estimators to demonstrate the feasibility of the mechanism. The experimental results show that the estimator can reject 20% of code completion requests with a 97.4% Precision.
Representation learning of source code is essential for applying machine learning to software engineering tasks. Learning code representation from a multilingual source code dataset has been shown to be more effective than learning from single-language datasets separately, since more training data from multilingual dataset improves the model's ability to extract language-agnostic information from source code. However, existing multilingual training overlooks the language-specific information which is crucial for modeling source code across different programming languages, while only focusing on learning a unified model with shared parameters among different languages for language-agnostic information modeling. To address this problem, we propose MetaTPTrans, a meta learning approach for multilingual code representation learning. MetaTPTrans generates different parameters for the feature extractor according to the specific programming language type of the input code snippet, enabling the model to learn both language-agnostic and language-specific information with dynamic parameters in the feature extractor. We conduct experiments on the code summarization and code completion tasks to verify the effectiveness of our approach. The results demonstrate the superiority of our approach with significant improvements on state-of-the-art baselines.