Histopathology whole slide images (WSIs) are being widely used to develop deep learning-based diagnostic solutions, especially for precision oncology. Most of these diagnostic softwares are vulnerable to biases and impurities in the training and test data which can lead to inaccurate diagnoses. For instance, WSIs contain multiple types of tissue regions, at least some of which might not be relevant to the diagnosis. We introduce HistoROI, a robust yet lightweight deep learning-based classifier to segregate WSI into six broad tissue regions -- epithelium, stroma, lymphocytes, adipose, artifacts, and miscellaneous. HistoROI is trained using a novel human-in-the-loop and active learning paradigm that ensures variations in training data for labeling-efficient generalization. HistoROI consistently performs well across multiple organs, despite being trained on only a single dataset, demonstrating strong generalization. Further, we have examined the utility of HistoROI in improving the performance of downstream deep learning-based tasks using the CAMELYON breast cancer lymph node and TCGA lung cancer datasets. For the former dataset, the area under the receiver operating characteristic curve (AUC) for metastasis versus normal tissue of a neural network trained using weakly supervised learning increased from 0.88 to 0.92 by filtering the data using HistoROI. Similarly, the AUC increased from 0.88 to 0.93 for the classification between adenocarcinoma and squamous cell carcinoma on the lung cancer dataset. We also found that the performance of the HistoROI improves upon HistoQC for artifact detection on a test dataset of 93 annotated WSIs. The limitations of the proposed model are analyzed, and potential extensions are also discussed.
Gaze target detection aims at determining the image location where a person is looking. While existing studies have made significant progress in this area by regressing accurate gaze heatmaps, these achievements have largely relied on access to extensive labeled datasets, which demands substantial human labor. In this paper, our goal is to reduce the reliance on the size of labeled training data for gaze target detection. To achieve this, we propose AL-GTD, an innovative approach that integrates supervised and self-supervised losses within a novel sample acquisition function to perform active learning (AL). Additionally, it utilizes pseudo-labeling to mitigate distribution shifts during the training phase. AL-GTD achieves the best of all AUC results by utilizing only 40-50% of the training data, in contrast to state-of-the-art (SOTA) gaze target detectors requiring the entire training dataset to achieve the same performance. Importantly, AL-GTD quickly reaches satisfactory performance with 10-20% of the training data, showing the effectiveness of our acquisition function, which is able to acquire the most informative samples. We provide a comprehensive experimental analysis by adapting several AL methods for the task. AL-GTD outperforms AL competitors, simultaneously exhibiting superior performance compared to SOTA gaze target detectors when all are trained within a low-data regime. Code is available at https://github.com/francescotonini/al-gtd.
Unsupervised domain adaptation (UDA) aims to transfer knowledge from a labeled source domain to an unlabeled target domain. Recent works have focused on source-free UDA, where only target data is available. This is challenging as models rely on noisy pseudo-labels and struggle with distribution shifts. We propose Active Adversarial Alignment (A3), a novel framework combining self-supervised learning, adversarial training, and active learning for robust source-free UDA. A3 actively samples informative and diverse data using an acquisition function for training. It adapts models via adversarial losses and consistency regularization, aligning distributions without source data access. A3 advances source-free UDA through its synergistic integration of active and adversarial learning for effective domain alignment and noise reduction.
Much of Earth's charismatic megafauna is endangered by human activities, particularly the rhino, which is at risk of extinction due to the poaching crisis in Africa. Monitoring rhinos' movement is crucial to their protection but has unfortunately proven difficult because rhinos are elusive. Therefore, instead of tracking rhinos, we propose the novel approach of mapping communal defecation sites, called middens, which give information about rhinos' spatial behavior valuable to anti-poaching, management, and reintroduction efforts. This paper provides the first-ever mapping of rhino midden locations by building classifiers to detect them using remotely sensed thermal, RGB, and LiDAR imagery in passive and active learning settings. As existing active learning methods perform poorly due to the extreme class imbalance in our dataset, we design MultimodAL, an active learning system employing a ranking technique and multimodality to achieve competitive performance with passive learning models with 94% fewer labels. Our methods could therefore save over 76 hours in labeling time when used on a similarly-sized dataset. Unexpectedly, our midden map reveals that rhino middens are not randomly distributed throughout the landscape; rather, they are clustered. Consequently, rangers should be targeted at areas with high midden densities to strengthen anti-poaching efforts, in line with UN Target 15.7.
We use machine learning to optimize LSM-tree structure, aiming to reduce the cost of processing various read/write operations. We introduce a new approach Camal, which boasts the following features: (1) ML-Aided: Camal is the first attempt to apply active learning to tune LSM-tree based key-value stores. The learning process is coupled with traditional cost models to improve the training process; (2) Decoupled Active Learning: backed by rigorous analysis, Camal adopts active learning paradigm based on a decoupled tuning of each parameter, which further accelerates the learning process; (3) Easy Extrapolation: Camal adopts an effective mechanism to incrementally update the model with the growth of the data size; (4) Dynamic Mode: Camal is able to tune LSM-tree online under dynamically changing workloads; (5) Significant System Improvement: By integrating Camal into a full system RocksDB, the system performance improves by 28% on average and up to 8x compared to a state-of-the-art RocksDB design.
Semi-Supervised Learning (SSL) has become a preferred paradigm in many deep learning tasks, which reduces the need for human labor. Previous studies primarily focus on effectively utilising the labelled and unlabeled data to improve performance. However, we observe that how to select samples for labelling also significantly impacts performance, particularly under extremely low-budget settings. The sample selection task in SSL has been under-explored for a long time. To fill in this gap, we propose a Representative and Diverse Sample Selection approach (RDSS). By adopting a modified Frank-Wolfe algorithm to minimise a novel criterion $\alpha$-Maximum Mean Discrepancy ($\alpha$-MMD), RDSS samples a representative and diverse subset for annotation from the unlabeled data. We demonstrate that minimizing $\alpha$-MMD enhances the generalization ability of low-budget learning. Experimental results show that RDSS consistently improves the performance of several popular SSL frameworks and outperforms the state-of-the-art sample selection approaches used in Active Learning (AL) and Semi-Supervised Active Learning (SSAL), even with constrained annotation budgets.
Finetuning large language models on instruction data is crucial for enhancing pre-trained knowledge and improving instruction-following capabilities. As instruction datasets proliferate, selecting optimal data for effective training becomes increasingly important. This work addresses the question: How can we determine the optimal subset of data for effective training? While existing research often emphasizes local criteria like instance quality for subset selection, we argue that a global approach focused on data diversity is more critical. Our method employs k-means clustering to ensure the selected subset effectively represents the full dataset. We propose an iterative refinement method inspired by active learning techniques to resample instances from clusters, reassessing each cluster's importance and sampling weight in every training iteration. This approach reduces the effect of outliers and automatically filters out clusters containing low-quality data. Through extensive evaluation across natural language reasoning, general world knowledge, code and math reasoning tasks, and by fine-tuning models from various families, we observe consistent improvements, achieving a 7% increase over random selection and a 3.8% improvement over state-of-the-art sampling methods. Our work highlights the significance of diversity-first sampling when finetuning LLMs to enhance performance across a broad array of evaluation tasks. Our code is available at https://github.com/for-ai/iterative-data-selection.
In recent years, there has been a surge in research on Question Difficulty Estimation (QDE) using natural language processing techniques. Transformer-based neural networks achieve state-of-the-art performance, primarily through supervised methods but with an isolated study in unsupervised learning. While supervised methods focus on predictive performance, they require abundant labeled data. On the other hand, unsupervised methods do not require labeled data but rely on a different evaluation metric that is also computationally expensive in practice. This work bridges the research gap by exploring active learning for QDE, a supervised human-in-the-loop approach striving to minimize the labeling efforts while matching the performance of state-of-the-art models. The active learning process iteratively trains on a labeled subset, acquiring labels from human experts only for the most informative unlabeled data points. Furthermore, we propose a novel acquisition function PowerVariance to add the most informative samples to the labeled set, a regression extension to the PowerBALD function popular in classification. We employ DistilBERT for QDE and identify informative samples by applying Monte Carlo dropout to capture epistemic uncertainty in unlabeled samples. The experiments demonstrate that active learning with PowerVariance acquisition achieves a performance close to fully supervised models after labeling only 10% of the training data. The proposed methodology promotes the responsible use of educational resources, makes QDE tools more accessible to course instructors, and is promising for other applications such as personalized support systems and question-answering tools.
LiDAR-based 3D object detection is a critical technology for the development of autonomous driving and robotics. However, the high cost of data annotation limits its advancement. We propose a novel and effective active learning (AL) method called Distribution Discrepancy and Feature Heterogeneity (DDFH), which simultaneously considers geometric features and model embeddings, assessing information from both the instance-level and frame-level perspectives. Distribution Discrepancy evaluates the difference and novelty of instances within the unlabeled and labeled distributions, enabling the model to learn efficiently with limited data. Feature Heterogeneity ensures the heterogeneity of intra-frame instance features, maintaining feature diversity while avoiding redundant or similar instances, thus minimizing annotation costs. Finally, multiple indicators are efficiently aggregated using Quantile Transform, providing a unified measure of informativeness. Extensive experiments demonstrate that DDFH outperforms the current state-of-the-art (SOTA) methods on the KITTI and Waymo datasets, effectively reducing the bounding box annotation cost by 56.3% and showing robustness when working with both one-stage and two-stage models.
The symbolic discovery of Ordinary Differential Equations (ODEs) from trajectory data plays a pivotal role in AI-driven scientific discovery. Existing symbolic methods predominantly rely on fixed, pre-collected training datasets, which often result in suboptimal performance, as demonstrated in our case study in Figure 1. Drawing inspiration from active learning, we investigate strategies to query informative trajectory data that can enhance the evaluation of predicted ODEs. However, the butterfly effect in dynamical systems reveals that small variations in initial conditions can lead to drastically different trajectories, necessitating the storage of vast quantities of trajectory data using conventional active learning. To address this, we introduce Active Symbolic Discovery of Ordinary Differential Equations via Phase Portrait Sketching (APPS). Instead of directly selecting individual initial conditions, our APPS first identifies an informative region within the phase space and then samples a batch of initial conditions from this region. Compared to traditional active learning methods, APPS mitigates the gap of maintaining a large amount of data. Extensive experiments demonstrate that APPS consistently discovers more accurate ODE expressions than baseline methods using passively collected datasets.
Active learning enhances annotation efficiency by selecting the most revealing samples for labeling, thereby reducing reliance on extensive human input. Previous methods in semantic segmentation have centered on individual pixels or small areas, neglecting the rich patterns in natural images and the power of advanced pre-trained models. To address these challenges, we propose three key contributions: Firstly, we introduce Entity-Superpixel Annotation (ESA), an innovative and efficient active learning strategy which utilizes a class-agnostic mask proposal network coupled with super-pixel grouping to capture local structural cues. Additionally, our method selects a subset of entities within each image of the target domain, prioritizing superpixels with high entropy to ensure comprehensive representation. Simultaneously, it focuses on a limited number of key entities, thereby optimizing for efficiency. By utilizing an annotator-friendly design that capitalizes on the inherent structure of images, our approach significantly outperforms existing pixel-based methods, achieving superior results with minimal queries, specifically reducing click cost by 98% and enhancing performance by 1.71%. For instance, our technique requires a mere 40 clicks for annotation, a stark contrast to the 5000 clicks demanded by conventional methods.
Although achieving promising performance, recent analyses show that current generative large language models (LLMs) may still capture dataset biases and utilize them for generation, leading to poor generalizability and harmfulness of LLMs. However, due to the diversity of dataset biases and the over-optimization problem, previous prior-knowledge-based debiasing methods and fine-tuning-based debiasing methods may not be suitable for current LLMs. To address this issue, we explore combining active learning with the causal mechanisms and propose a casual-guided active learning (CAL) framework, which utilizes LLMs itself to automatically and autonomously identify informative biased samples and induce the bias patterns. Then a cost-effective and efficient in-context learning based method is employed to prevent LLMs from utilizing dataset biases during generation. Experimental results show that CAL can effectively recognize typical biased instances and induce various bias patterns for debiasing LLMs.
Active learning (AL) has shown promise for being a particularly data-efficient machine learning approach. Yet, its performance depends on the application and it is not clear when AL practitioners can expect computational savings. Here, we carry out a systematic AL performance assessment for three diverse molecular datasets and two common scientific tasks: compiling compact, informative datasets and targeted molecular searches. We implemented AL with Gaussian processes (GP) and used the many-body tensor as molecular representation. For the first task, we tested different data acquisition strategies, batch sizes and GP noise settings. AL was insensitive to the acquisition batch size and we observed the best AL performance for the acquisition strategy that combines uncertainty reduction with clustering to promote diversity. However, for optimal GP noise settings, AL did not outperform randomized selection of data points. Conversely, for targeted searches, AL outperformed random sampling and achieved data savings up to 64%. Our analysis provides insight into this task-specific performance difference in terms of target distributions and data collection strategies. We established that the performance of AL depends on the relative distribution of the target molecules in comparison to the total dataset distribution, with the largest computational savings achieved when their overlap is minimal.
Large Language Models (LLMs) have achieved significant advancements, however, the common learning paradigm treats LLMs as passive information repositories, neglecting their potential for active learning and alignment. Some approaches train LLMs using their own generated synthetic data, exploring the possibility of active alignment. However, there is still a huge gap between these one-time alignment methods and the continuous automatic alignment of humans. In this paper, we introduce \textbf{I-SHEEP}, an \textbf{I}terative \textbf{S}elf-En\textbf{H}anc\textbf{E}m\textbf{E}nt \textbf{P}aradigm.This human-like paradigm enables LLMs to \textbf{continuously self-align from scratch with nothing}. Compared to the one-time alignment method Dromedary \cite{sun2023principledriven}, which refers to the first iteration in this paper, I-SHEEP can significantly enhance capacities on both Qwen and Llama models. I-SHEEP achieves a maximum relative improvement of 78.2\% in the Alpaca Eval, 24.0\% in the MT Bench, and an absolute increase of 8.88\% in the IFEval accuracy over subsequent iterations in Qwen-1.5 72B model. Additionally, I-SHEEP surpasses the base model in various standard benchmark generation tasks, achieving an average improvement of 24.77\% in code generation tasks, 12.04\% in TrivialQA, and 20.29\% in SQuAD. We also provide new insights based on the experiment results. Our codes, datasets, and models are available at \textbf{https://anonymous.4open.science/r/I-SHEEP}.
We consider the problem of active learning on graphs, which has crucial applications in many real-world networks where labeling node responses is expensive. In this paper, we propose an offline active learning method that selects nodes to query by explicitly incorporating information from both the network structure and node covariates. Building on graph signal recovery theories and the random spectral sparsification technique, the proposed method adopts a two-stage biased sampling strategy that takes both informativeness and representativeness into consideration for node querying. Informativeness refers to the complexity of graph signals that are learnable from the responses of queried nodes, while representativeness refers to the capacity of queried nodes to control generalization errors given noisy node-level information. We establish a theoretical relationship between generalization error and the number of nodes selected by the proposed method. Our theoretical results demonstrate the trade-off between informativeness and representativeness in active learning. Extensive numerical experiments show that the proposed method is competitive with existing graph-based active learning methods, especially when node covariates and responses contain noises. Additionally, the proposed method is applicable to both regression and classification tasks on graphs.
In this dissertation, we propose a systemic framework that prioritizes informative features and examples to enhance each stage of the development process. Specifically, we prioritize informative features and examples and improve the performance of feature learning, data labeling, and data selection. We first propose an approach to extract only informative features that are inherent to solving a target task by using auxiliary out-of-distribution data. We deactivate the noise features in the target distribution by using that in the out-of-distribution data. Next, we introduce an approach that prioritizes informative examples from unlabeled noisy data in order to reduce the labeling cost of active learning. In order to solve the purity-information dilemma, where an attempt to select informative examples induces the selection of many noisy examples, we propose a meta-model that finds the best balance between purity and informativeness. Lastly, we suggest an approach that prioritizes informative examples from labeled noisy data to preserve the performance of data selection. For labeled image noise data, we propose a data selection method that considers the confidence of neighboring samples to maintain the performance of the state-of-the-art Re-labeling models. For labeled text noise data, we present an instruction selection method that takes diversity into account for ranking the quality of instructions with prompting, thereby enhancing the performance of aligned large language models. Overall, our unified framework induces the deep learning development process robust to noisy data, thereby effectively mitigating noisy features and examples in real-world applications.
Active learning (AL) aims to enhance model performance by selectively collecting highly informative data, thereby minimizing annotation costs. However, in practical scenarios, unlabeled data may contain out-of-distribution (OOD) samples, leading to wasted annotation costs if data is incorrectly selected. Recent research has explored methods to apply AL to open-set data, but these methods often require or incur unavoidable cost losses to minimize them. To address these challenges, we propose a novel selection strategy, CLIPN for AL (CLIPNAL), which minimizes cost losses without requiring OOD samples. CLIPNAL sequentially evaluates the purity and informativeness of data. First, it utilizes a pre-trained vision-language model to detect and exclude OOD data by leveraging linguistic and visual information of in-distribution (ID) data without additional training. Second, it selects highly informative data from the remaining ID data, and then the selected samples are annotated by human experts. Experimental results on datasets with various open-set conditions demonstrate that CLIPNAL achieves the lowest cost loss and highest performance across all scenarios. Code is available at https://github.com/DSBA-Lab/OpenAL.
Solving partial differential equations (PDEs) is a fundamental problem in science and engineering. While neural PDE solvers can be more efficient than established numerical solvers, they often require large amounts of training data that is costly to obtain. Active learning (AL) could help surrogate models reach the same accuracy with smaller training sets by querying classical solvers with more informative initial conditions and PDE parameters. While AL is more common in other domains, it has yet to be studied extensively for neural PDE solvers. To bridge this gap, we introduce AL4PDE, a modular and extensible active learning benchmark. It provides multiple parametric PDEs and state-of-the-art surrogate models for the solver-in-the-loop setting, enabling the evaluation of existing and the development of new AL methods for neural PDE solving. We use the benchmark to evaluate batch active learning algorithms such as uncertainty- and feature-based methods. We show that AL reduces the average error by up to 71% compared to random sampling and significantly reduces worst-case errors. Moreover, AL generates similar datasets across repeated runs, with consistent distributions over the PDE parameters and initial conditions. The acquired datasets are reusable, providing benefits for surrogate models not involved in the data generation.
Active Learning (AL) deals with identifying the most informative samples for labeling to reduce data annotation costs for supervised learning tasks. AL research suffers from the fact that lifts from literature generalize poorly and that only a small number of repetitions of experiments are conducted. To overcome these obstacles, we propose CDALBench, the first active learning benchmark which includes tasks in computer vision, natural language processing and tabular learning. Furthermore, by providing an efficient, greedy oracle, CDALBench can be evaluated with 50 runs for each experiment. We show, that both the cross-domain character and a large amount of repetitions are crucial for sophisticated evaluation of AL research. Concretely, we show that the superiority of specific methods varies over the different domains, making it important to evaluate Active Learning with a cross-domain benchmark. Additionally, we show that having a large amount of runs is crucial. With only conducting three runs as often done in the literature, the superiority of specific methods can strongly vary with the specific runs. This effect is so strong, that, depending on the seed, even a well-established method's performance can be significantly better and significantly worse than random for the same dataset.
Human annotators typically provide annotated data for training machine learning models, such as neural networks. Yet, human annotations are subject to noise, impairing generalization performances. Methodological research on approaches counteracting noisy annotations requires corresponding datasets for a meaningful empirical evaluation. Consequently, we introduce a novel benchmark dataset, dopanim, consisting of about 15,750 animal images of 15 classes with ground truth labels. For approximately 10,500 of these images, 20 humans provided over 52,000 annotations with an accuracy of circa 67%. Its key attributes include (1) the challenging task of classifying doppelganger animals, (2) human-estimated likelihoods as annotations, and (3) annotator metadata. We benchmark well-known multi-annotator learning approaches using seven variants of this dataset and outline further evaluation use cases such as learning beyond hard class labels and active learning. Our dataset and a comprehensive codebase are publicly available to emulate the data collection process and to reproduce all empirical results.