Limited availability of labeled physiological data often prohibits the use of powerful supervised deep learning models in the biomedical machine intelligence domain. We approach this problem and propose a novel encoding framework that relies on self-supervised learning with momentum contrast to learn representations from multivariate time-series of various physiological domains without needing labels. Our model uses a transformer architecture that can be easily adapted to classification problems by optimizing a linear output classification layer. We experimentally evaluate our framework using two publicly available physiological datasets from different domains, i.e., human activity recognition from embedded inertial sensory and emotion recognition from electroencephalography. We show that our self-supervised learning approach can indeed learn discriminative features which can be exploited in downstream classification tasks. Our work enables the development of domain-agnostic intelligent systems that can effectively analyze multivariate time-series data from physiological domains.
Multi-dimensional classification (MDC) can be employed in a range of applications where one needs to predict multiple class variables for each given instance. Many existing MDC methods suffer from at least one of inaccuracy, scalability, limited use to certain types of data, hardness of interpretation or lack of probabilistic (uncertainty) estimations. This paper is an attempt to address all these disadvantages simultaneously. We propose a formal framework for probabilistic MDC in which learning an optimal multi-dimensional classifier can be decomposed, without loss of generality, into learning a set of (smaller) single-variable multi-class probabilistic classifiers and a directed acyclic graph. Current and future developments of both probabilistic classification and graphical model learning can directly enhance our framework, which is flexible and provably optimal. A collection of experiments is conducted to highlight the usefulness of this MDC framework.
Understanding the differences between machine learning (ML) models is of interest in scenarios ranging from choosing amongst a set of competing models, to updating a deployed model with new training data. In these cases, we wish to go beyond differences in overall metrics such as accuracy to identify where in the feature space do the differences occur. We formalize this problem of model differencing as one of predicting a dissimilarity function of two ML models' outputs, subject to the representation of the differences being human-interpretable. Our solution is to learn a Joint Surrogate Tree (JST), which is composed of two conjoined decision tree surrogates for the two models. A JST provides an intuitive representation of differences and places the changes in the context of the models' decision logic. Context is important as it helps users to map differences to an underlying mental model of an AI system. We also propose a refinement procedure to increase the precision of a JST. We demonstrate, through an empirical evaluation, that such contextual differencing is concise and can be achieved with no loss in fidelity over naive approaches.
It is assumed that pre-training provides the feature extractor with strong class transferability and that high novel class generalization can be achieved by simply reusing the transferable feature extractor. In this work, our motivation is to explicitly learn some fine-grained and transferable meta-knowledge so that feature reusability can be further improved. Concretely, inspired by the fact that humans can use learned concepts or components to help them recognize novel classes, we propose Compositional Prototypical Networks (CPN) to learn a transferable prototype for each human-annotated attribute, which we call a component prototype. We empirically demonstrate that the learned component prototypes have good class transferability and can be reused to construct compositional prototypes for novel classes. Then a learnable weight generator is utilized to adaptively fuse the compositional and visual prototypes. Extensive experiments demonstrate that our method can achieve state-of-the-art results on different datasets and settings. The performance gains are especially remarkable in the 5-way 1-shot setting. The code is available at https://github.com/fikry102/CPN.
The need to explain the output of a deep neural network classifier is now widely recognized. While previous methods typically explain a single class in the output, we advocate explaining the whole output, which is a probability distribution over multiple classes. A whole-output explanation can help a human user gain an overall understanding of model behaviour instead of only one aspect of it. It can also provide a natural framework where one can examine the evidence used to discriminate between competing classes, and thereby obtain contrastive explanations. In this paper, we propose a contrastive whole-output explanation (CWOX) method for image classification, and evaluate it using quantitative metrics and through human subject studies. The source code of CWOX is available at https://github.com/vaynexie/CWOX.
The visual classification performance of vision-language models such as CLIP has been shown to benefit from additional semantic knowledge from large language models (LLMs) such as GPT-3. In particular, averaging over LLM-generated class descriptors, e.g. "waffle, which has a round shape", can notably improve generalization performance. In this work, we critically study this behavior and propose WaffleCLIP, a framework for zero-shot visual classification which simply replaces LLM-generated descriptors with random character and word descriptors. Without querying external models, we achieve comparable performance gains on a large number of visual classification tasks. This allows WaffleCLIP to both serve as a low-cost alternative, as well as a sanity check for any future LLM-based vision-language model extensions. We conduct an extensive experimental study on the impact and shortcomings of additional semantics introduced with LLM-generated descriptors, and showcase how - if available - semantic context is better leveraged by querying LLMs for high-level concepts, which we show can be done to jointly resolve potential class name ambiguities. Code is available here: https://github.com/ExplainableML/WaffleCLIP.
Prior studies generally focus on software vulnerability detection and have demonstrated the effectiveness of Graph Neural Network (GNN)-based approaches for the task. Considering the various types of software vulnerabilities and the associated different degrees of severity, it is also beneficial to determine the type of each vulnerable code for developers. In this paper, we observe that the distribution of vulnerability type is long-tailed in practice, where a small portion of classes have massive samples (i.e., head classes) but the others contain only a few samples (i.e., tail classes). Directly adopting previous vulnerability detection approaches tends to result in poor detection performance, mainly due to two reasons. First, it is difficult to effectively learn the vulnerability representation due to the over-smoothing issue of GNNs. Second, vulnerability types in tails are hard to be predicted due to the extremely few associated samples.To alleviate these issues, we propose a Long-taIled software VulnerABiLity typE classification approach, called LIVABLE. LIVABLE mainly consists of two modules, including (1) vulnerability representation learning module, which improves the propagation steps in GNN to distinguish node representations by a differentiated propagation method. A sequence-to-sequence model is also involved to enhance the vulnerability representations. (2) adaptive re-weighting module, which adjusts the learning weights for different types according to the training epochs and numbers of associated samples by a novel training loss.
Deep learning models often face challenges when handling real-world image corruptions. In response, researchers have developed image corruption datasets to evaluate the performance of deep neural networks in handling such corruptions. However, these datasets have a significant limitation: they do not account for all corruptions encountered in real-life scenarios. To address this gap, we present MUFIA (Multiplicative Filter Attack), an algorithm designed to identify the specific types of corruptions that can cause models to fail. Our algorithm identifies the combination of image frequency components that render a model susceptible to misclassification while preserving the semantic similarity to the original image. We find that even state-of-the-art models trained to be robust against known common corruptions struggle against the low visibility-based corruptions crafted by MUFIA. This highlights the need for more comprehensive approaches to enhance model robustness against a wider range of real-world image corruptions.
Large-scale pre-trained language models such as BERT are popular solutions for text classification. Due to the superior performance of these advanced methods, nowadays, people often directly train them for a few epochs and deploy the obtained model. In this opinion paper, we point out that this way may only sometimes get satisfactory results. We argue the importance of running a simple baseline like linear classifiers on bag-of-words features along with advanced methods. First, for many text data, linear methods show competitive performance, high efficiency, and robustness. Second, advanced models such as BERT may only achieve the best results if properly applied. Simple baselines help to confirm whether the results of advanced models are acceptable. Our experimental results fully support these points.
Zero-shot classification of image scenes which can recognize the image scenes that are not seen in the training stage holds great promise of lowering the dependence on large numbers of labeled samples. To address the zero-shot image scene classification, the cross-modal feature alignment methods have been proposed in recent years. These methods mainly focus on matching the visual features of each image scene with their corresponding semantic descriptors in the latent space. Less attention has been paid to the contrastive relationships between different image scenes and different semantic descriptors. In light of the challenge of large intra-class difference and inter-class similarity among image scenes and the potential noisy samples, these methods are susceptible to the influence of the instances which are far from these of the same classes and close to these of other classes. In this work, we propose a multi-level cross-modal feature alignment method via contrastive learning for zero-shot classification of remote sensing image scenes. While promoting the single-instance level positive alignment between each image scene with their corresponding semantic descriptors, the proposed method takes the cross-instance contrastive relationships into consideration,and learns to keep the visual and semantic features of different classes in the latent space apart from each other. Extensive experiments have been done to evaluate the performance of the proposed method. The results show that our proposed method outperforms state of the art methods for zero-shot remote sensing image scene classification. All the code and data are available at github https://github.com/masuqiang/MCFA-Pytorch
Time series classification is a task which deals with temporal sequences, a prevalent data type common in domains such as human activity recognition, sports analytics and general sensing. In this area, interest in explainability has been growing as explanation is key to understand the data and the model better. Recently, a great variety of techniques have been proposed and adapted for time series to provide explanation in the form of saliency maps, where the importance of each data point in the time series is quantified with a numerical value. However, the saliency maps can and often disagree, so it is unclear which one to use. This paper provides a novel framework to quantitatively evaluate and rank explanation methods for time series classification. We show how to robustly evaluate the informativeness of a given explanation method (i.e., relevance for the classification task), and how to compare explanations side-by-side. The goal is to recommend the best explainer for a given time series classification dataset. We propose AMEE, a Model-Agnostic Explanation Evaluation framework, for recommending saliency-based explanations for time series classification. In this approach, data perturbation is added to the input time series guided by each explanation. Our results show that perturbing discriminative parts of the time series leads to significant changes in classification accuracy, which can be used to evaluate each explanation. To be robust to different types of perturbations and different types of classifiers, we aggregate the accuracy loss across perturbations and classifiers. This novel approach allows us to recommend the best explainer among a set of different explainers, including random and oracle explainers. We provide a quantitative and qualitative analysis for synthetic datasets, a variety of timeseries datasets, as well as a real-world case study with known expert ground truth.
Leveraging second-order information about the loss at the scale of deep networks is one of the main lines of approach for improving the performance of current optimizers for deep learning. Yet, existing approaches for accurate full-matrix preconditioning, such as Full-Matrix Adagrad (GGT) or Matrix-Free Approximate Curvature (M-FAC) suffer from massive storage costs when applied even to small-scale models, as they must store a sliding window of gradients, whose memory requirements are multiplicative in the model dimension. In this paper, we address this issue via a novel and efficient error-feedback technique that can be applied to compress preconditioners by up to two orders of magnitude in practice, without loss of convergence. Specifically, our approach compresses the gradient information via sparsification or low-rank compression \emph{before} it is fed into the preconditioner, feeding the compression error back into future iterations. Experiments on deep neural networks show that this approach can compress full-matrix preconditioners to up to 99\% sparsity without accuracy loss, effectively removing the memory overhead of full-matrix preconditioners such as GGT and M-FAC. Our code is available at \url{https://github.com/IST-DASLab/EFCP}.
Cross-lingual text classification leverages text classifiers trained in a high-resource language to perform text classification in other languages with no or minimal fine-tuning (zero/few-shots cross-lingual transfer). Nowadays, cross-lingual text classifiers are typically built on large-scale, multilingual language models (LMs) pretrained on a variety of languages of interest. However, the performance of these models vary significantly across languages and classification tasks, suggesting that the superposition of the language modelling and classification tasks is not always effective. For this reason, in this paper we propose revisiting the classic "translate-and-test" pipeline to neatly separate the translation and classification stages. The proposed approach couples 1) a neural machine translator translating from the targeted language to a high-resource language, with 2) a text classifier trained in the high-resource language, but the neural machine translator generates "soft" translations to permit end-to-end backpropagation during fine-tuning of the pipeline. Extensive experiments have been carried out over three cross-lingual text classification datasets (XNLI, MLDoc and MultiEURLEX), with the results showing that the proposed approach has significantly improved performance over a competitive baseline.
We present a comprehensive analysis of quantitatively evaluating explainable artificial intelligence (XAI) techniques for remote sensing image classification. Our approach leverages state-of-the-art machine learning approaches to perform remote sensing image classification across multiple modalities. We investigate the results of the models qualitatively through XAI methods. Additionally, we compare the XAI methods quantitatively through various categories of desired properties. Through our analysis, we offer insights and recommendations for selecting the most appropriate XAI method(s) to gain a deeper understanding of the models' decision-making processes. The code for this work is publicly available.
It is generally assumed that number of classes is fixed in current audio classification methods, and the model can recognize pregiven classes only. When new classes emerge, the model needs to be retrained with adequate samples of all classes. If new classes continually emerge, these methods will not work well and even infeasible. In this study, we propose a method for fewshot class-incremental audio classification, which continually recognizes new classes and remember old ones. The proposed model consists of an embedding extractor and a stochastic classifier. The former is trained in base session and frozen in incremental sessions, while the latter is incrementally expanded in all sessions. Two datasets (NS-100 and LS-100) are built by choosing samples from audio corpora of NSynth and LibriSpeech, respectively. Results show that our method exceeds four baseline ones in average accuracy and performance dropping rate. Code is at https://github.com/vinceasvp/meta-sc.
In visual object classification, humans often justify their choices by comparing objects to prototypical examples within that class. We may therefore increase the interpretability of deep learning models by imbuing them with a similar style of reasoning. In this work, we apply this principle by classifying Alzheimer's Disease based on the similarity of images to training examples within the latent space. We use a contrastive loss combined with a diffusion autoencoder backbone, to produce a semantically meaningful latent space, such that neighbouring latents have similar image-level features. We achieve a classification accuracy comparable to black box approaches on a dataset of 2D MRI images, whilst producing human interpretable model explanations. Therefore, this work stands as a contribution to the pertinent development of accurate and interpretable deep learning within medical imaging.
Visual-language foundation models, like CLIP, learn generalized representations that enable zero-shot open-set classification. Few-shot adaptation methods, based on prompt tuning, have been shown to further improve performance on downstream datasets. However, these methods do not fare well in the taxonomic open set (TOS) setting, where the classifier is asked to make predictions from label sets across different levels of semantic granularity. Frequently, they infer incorrect labels at coarser taxonomic class levels, even when the inference at the leaf level (original class labels) is correct. To address this problem, we propose a prompt tuning technique that calibrates the hierarchical consistency of model predictions. A set of metrics of hierarchical consistency, the Hierarchical Consistent Accuracy (HCA) and the Mean Treecut Accuracy (MTA), are first proposed to evaluate TOS model performance. A new Prompt Tuning for Hierarchical Consistency (ProTeCt) technique is then proposed to calibrate classification across label set granularities. Results show that ProTeCt can be combined with existing prompt tuning methods to significantly improve TOS classification without degrading the leaf level classification performance.
This paper introduces the award-winning deep learning (DL) library called LibAUC for implementing state-of-the-art algorithms towards optimizing a family of risk functions named X-risks. X-risks refer to a family of compositional functions in which the loss function of each data point is defined in a way that contrasts the data point with a large number of others. They have broad applications in AI for solving classical and emerging problems, including but not limited to classification for imbalanced data (CID), learning to rank (LTR), and contrastive learning of representations (CLR). The motivation of developing LibAUC is to address the convergence issues of existing libraries for solving these problems. In particular, existing libraries may not converge or require very large mini-batch sizes in order to attain good performance for these problems, due to the usage of the standard mini-batch technique in the empirical risk minimization (ERM) framework. Our library is for deep X-risk optimization (DXO) that has achieved great success in solving a variety of tasks for CID, LTR and CLR. The contributions of this paper include: (1) It introduces a new mini-batch based pipeline for implementing DXO algorithms, which differs from existing DL pipeline in the design of controlled data samplers and dynamic mini-batch losses; (2) It provides extensive benchmarking experiments for ablation studies and comparison with existing libraries. The LibAUC library features scalable performance for millions of items to be contrasted, faster and better convergence than existing libraries for optimizing X-risks, seamless PyTorch deployment and versatile APIs for various loss optimization. Our library is available to the open source community at https://github.com/Optimization-AI/LibAUC, to facilitate further academic research and industrial applications.
A hypergraph is a data structure composed of nodes and hyperedges, where each hyperedge is an any-sized subset of nodes. Due to the flexibility in hyperedge size, hypergraphs represent group interactions (e.g., co-authorship by more than two authors) more naturally and accurately than ordinary graphs. Interestingly, many real-world systems modeled as hypergraphs contain edge-dependent node labels, i.e., node labels that vary depending on hyperedges. For example, on co-authorship datasets, the same author (i.e., a node) can be the primary author in a paper (i.e., a hyperedge) but the corresponding author in another paper (i.e., another hyperedge). In this work, we introduce a classification of edge-dependent node labels as a new problem. This problem can be used as a benchmark task for hypergraph neural networks, which recently have attracted great attention, and also the usefulness of edge-dependent node labels has been verified in various applications. To tackle this problem, we propose WHATsNet, a novel hypergraph neural network that represents the same node differently depending on the hyperedges it participates in by reflecting its varying importance in the hyperedges. To this end, WHATsNet models the relations between nodes within each hyperedge, using their relative centrality as positional encodings. In our experiments, we demonstrate that WHATsNet significantly and consistently outperforms ten competitors on six real-world hypergraphs, and we also show successful applications of WHATsNet to (a) ranking aggregation, (b) node clustering, and (c) product return prediction.
Population Based Training (PBT) is an efficient hyperparameter optimization algorithm. PBT is a single-objective algorithm, but many real-world hyperparameter optimization problems involve two or more conflicting objectives. In this work, we therefore introduce a multi-objective version of PBT, MO-PBT. Our experiments on diverse multi-objective hyperparameter optimization problems (Precision/Recall, Accuracy/Fairness, Accuracy/Adversarial Robustness) show that MO-PBT outperforms random search, single-objective PBT, and the state-of-the-art multi-objective hyperparameter optimization algorithm MO-ASHA.