Vision-and-language pretraining (VLP) in the medical field utilizes contrastive learning on image-text pairs to achieve effective transfer across tasks. Yet, current VLP approaches with the masked modeling strategy face two challenges when applied to the medical domain. First, current models struggle to accurately reconstruct key pathological features due to the scarcity of medical data. Second, most methods only adopt either paired image-text or image-only data, failing to exploit the combination of both paired and unpaired data. To this end, this paper proposes the MMCLIP (Masked Medical Contrastive Language-Image Pre-Training) framework to enhance pathological learning and feature learning via unpaired data. First, we introduce the attention-masked image modeling (AttMIM) and entity-driven masked language modeling module (EntMLM), which learns to reconstruct pathological visual and textual tokens via multi-modal feature interaction, thus improving medical-enhanced features. The AttMIM module masks a portion of the image features that are highly responsive to textual features. This allows MMCLIP to improve the reconstruction of highly similar image data in medicine efficiency. Second, our MMCLIP capitalizes unpaired data to enhance multimodal learning by introducing disease-kind prompts. The experimental results show that MMCLIP achieves SOTA for zero-shot and fine-tuning classification performance on five datasets. Our code will be available at https://github.com/AIGeeksGroup/MMCLIP.
Domain reweighting is an emerging research area aimed at adjusting the relative weights of different data sources to improve the effectiveness and efficiency of LLM pre-training. We show that data mixtures that perform well at smaller scales may not retain their advantage at larger scales, challenging the existing practice of determining competitive mixtures in small-scale experiments and directly applying them at much larger scales. To address this, we propose AutoScale, a two-stage, scale-aware data composition framework. First, AutoScale fits a parametric model that predicts the model's loss under different data compositions, then uses it to find an approximate best allocation at smaller, more manageable budgets. Next, leveraging a novel theoretical analysis of how optimal compositions evolve with scale, AutoScale extrapolates that composition to larger budgets without further retraining. Empirically, AutoScale accelerates convergence and improves downstream performance. For instance, when pre-training GPT-2 Large, it achieves a 28% faster perplexity reduction than baselines and up to a 38% speed-up over unweighted training, while yielding best-average results on various downstream tasks. Overall, our findings illustrate how domain importance shifts with training scale, underscoring the need for scale-dependent data curation in LLM training. Our code is open-sourced.
This paper explores the evolution of word meanings in 19th-century Spanish texts, with an emphasis on Latin American Spanish, using computational linguistics techniques. It addresses the Semantic Shift Detection (SSD) task, which is crucial for understanding linguistic evolution, particularly in historical contexts. The study focuses on analyzing a set of Spanish target words. To achieve this, a 19th-century Spanish corpus is constructed, and a customizable pipeline for SSD tasks is developed. This pipeline helps find the senses of a word and measure their semantic change between two corpora using fine-tuned BERT-like models with old Spanish texts for both Latin American and general Spanish cases. The results provide valuable insights into the cultural and societal shifts reflected in language changes over time.
This paper explores the integration of graph knowledge from linguistic ontologies into multilingual Large Language Models (LLMs) using adapters to improve performance for low-resource languages (LRLs) in sentiment analysis (SA) and named entity recognition (NER). Building upon successful parameter-efficient fine-tuning techniques, such as K-ADAPTER and MAD-X, we propose a similar approach for incorporating knowledge from multilingual graphs, connecting concepts in various languages with each other through linguistic relationships, into multilingual LLMs for LRLs. Specifically, we focus on eight LRLs -- Maltese, Bulgarian, Indonesian, Nepali, Javanese, Uyghur, Tibetan, and Sinhala -- and employ language-specific adapters fine-tuned on data extracted from the language-specific section of ConceptNet, aiming to enable knowledge transfer across the languages covered by the knowledge graph. We compare various fine-tuning objectives, including standard Masked Language Modeling (MLM), MLM with full-word masking, and MLM with targeted masking, to analyse their effectiveness in learning and integrating the extracted graph data. Through empirical evaluation on language-specific tasks, we assess how structured graph knowledge affects the performance of multilingual LLMs for LRLs in SA and NER, providing insights into the potential benefits of adapting language models for low-resource scenarios.
Hierarchical text classification (HTC) is an important task with broad applications, while few-shot HTC has gained increasing interest recently. While in-context learning (ICL) with large language models (LLMs) has achieved significant success in few-shot learning, it is not as effective for HTC because of the expansive hierarchical label sets and extremely-ambiguous labels. In this work, we introduce the first ICL-based framework with LLM for few-shot HTC. We exploit a retrieval database to identify relevant demonstrations, and an iterative policy to manage multi-layer hierarchical labels. Particularly, we equip the retrieval database with HTC label-aware representations for the input texts, which is achieved by continual training on a pretrained language model with masked language modeling (MLM), layer-wise classification (CLS, specifically for HTC), and a novel divergent contrastive learning (DCL, mainly for adjacent semantically-similar labels) objective. Experimental results on three benchmark datasets demonstrate superior performance of our method, and we can achieve state-of-the-art results in few-shot HTC.
With the increasing role of Natural Language Processing (NLP) in various applications, challenges concerning bias and stereotype perpetuation are accentuated, which often leads to hate speech and harm. Despite existing studies on sexism and misogyny, issues like homophobia and transphobia remain underexplored and often adopt binary perspectives, putting the safety of LGBTQIA+ individuals at high risk in online spaces. In this paper, we assess the potential harm caused by sentence completions generated by English large language models (LLMs) concerning LGBTQIA+ individuals. This is achieved using QueerBench, our new assessment framework, which employs a template-based approach and a Masked Language Modeling (MLM) task. The analysis indicates that large language models tend to exhibit discriminatory behaviour more frequently towards individuals within the LGBTQIA+ community, reaching a difference gap of 7.2% in the QueerBench score of harmfulness.
While diffusion models excel at generating high-quality images, prior work reports a significant performance gap between diffusion and autoregressive (AR) methods in language modeling. In this work, we show that simple masked discrete diffusion is more performant than previously thought. We apply an effective training recipe that improves the performance of masked diffusion models and derive a simplified, Rao-Blackwellized objective that results in additional improvements. Our objective has a simple form -- it is a mixture of classical masked language modeling losses -- and can be used to train encoder-only language models that admit efficient samplers, including ones that can generate arbitrary lengths of text semi-autoregressively like a traditional language model. On language modeling benchmarks, a range of masked diffusion models trained with modern engineering practices achieves a new state-of-the-art among diffusion models, and approaches AR perplexity. We provide the code, along with a blog post and video tutorial on the project page: https://s-sahoo.com/mdlm
We introduce Visual Caption Restoration (VCR), a novel vision-language task that challenges models to accurately restore partially obscured texts using pixel-level hints within images. This task stems from the observation that text embedded in images is intrinsically different from common visual elements and natural language due to the need to align the modalities of vision, text, and text embedded in images. While numerous works have integrated text embedded in images into visual question-answering tasks, approaches to these tasks generally rely on optical character recognition or masked language modeling, thus reducing the task to mainly text-based processing. However, text-based processing becomes ineffective in VCR as accurate text restoration depends on the combined information from provided images, context, and subtle cues from the tiny exposed areas of masked texts. We develop a pipeline to generate synthetic images for the VCR task using image-caption pairs, with adjustable caption visibility to control the task difficulty. With this pipeline, we construct a dataset for VCR called VCR-Wiki using images with captions from Wikipedia, comprising 2.11M English and 346K Chinese entities in both easy and hard split variants. Our results reveal that current vision language models significantly lag behind human performance in the VCR task, and merely fine-tuning the models on our dataset does not lead to notable improvements. We release VCR-Wiki and the data construction code to facilitate future research.
Large language models have gained tremendous popularity in domains such as e-commerce, finance, healthcare, and education. Fine-tuning is a common approach to customize an LLM on a domain-specific dataset for a desired downstream task. In this paper, we present a valuable resource for fine-tuning LLMs developed for the Spanish language to perform a variety of tasks such as classification, masked language modeling, clustering, and others. Our resource is a collection of handwritten notary records from the seventeenth century obtained from the National Archives of Argentina. This collection contains a combination of original images and transcribed text (and metadata) of 160+ pages that were handwritten by two notaries, namely, Estenban Agreda de Vergara and Nicolas de Valdivia y Brisuela nearly 400 years ago. Through empirical evaluation, we demonstrate that our collection can be used to fine-tune Spanish LLMs for tasks such as classification and masked language modeling, and can outperform pre-trained Spanish models and ChatGPT-3.5/ChatGPT-4o. Our resource will be an invaluable resource for historical text analysis and is publicly available on GitHub.
This paper outlines the approach of the ISDS-NLP team in the SemEval 2024 Task 10: Emotion Discovery and Reasoning its Flip in Conversation (EDiReF). For Subtask 1 we obtained a weighted F1 score of 0.43 and placed 12 in the leaderboard. We investigate two distinct approaches: Masked Language Modeling (MLM) and Causal Language Modeling (CLM). For MLM, we employ pre-trained BERT-like models in a multilingual setting, fine-tuning them with a classifier to predict emotions. Experiments with varying input lengths, classifier architectures, and fine-tuning strategies demonstrate the effectiveness of this approach. Additionally, we utilize Mistral 7B Instruct V0.2, a state-of-the-art model, applying zero-shot and few-shot prompting techniques. Our findings indicate that while Mistral shows promise, MLMs currently outperform them in sentence-level emotion classification.
Self-supervised pretraining (SSP) has been recognized as a method to enhance prediction accuracy in various downstream tasks. However, its efficacy for DNA sequences remains somewhat constrained. This limitation stems primarily from the fact that most existing SSP approaches in genomics focus on masked language modeling of individual sequences, neglecting the crucial aspect of encoding statistics across multiple sequences. To overcome this challenge, we introduce an innovative deep neural network model, which incorporates collaborative learning between a `student' and a `teacher' subnetwork. In this model, the student subnetwork employs masked learning on nucleotides and progressively adapts its parameters to the teacher subnetwork through an exponential moving average approach. Concurrently, both subnetworks engage in contrastive learning, deriving insights from two augmented representations of the input sequences. This self-distillation process enables our model to effectively assimilate both contextual information from individual sequences and distributional data across the sequence population. We validated our approach with preliminary pretraining using the human reference genome, followed by applying it to 20 downstream inference tasks. The empirical results from these experiments demonstrate that our novel method significantly boosts inference performance across the majority of these tasks. Our code is available at https://github.com/wiedersehne/FinDNA.
The representation of events in text plays a significant role in various NLP tasks. Recent research demonstrates that contrastive learning has the ability to improve event comprehension capabilities of Pre-trained Language Models (PLMs) and enhance the performance of event representation learning. However, the efficacy of event representation learning based on contrastive learning and PLMs is limited by the short length of event texts. The length of event texts differs significantly from the text length used in the pre-training of PLMs. As a result, there is inconsistency in the distribution of text length between pre-training and event representation learning, which may undermine the learning process of event representation based on PLMs. In this study, we present PromptCL, a novel framework for event representation learning that effectively elicits the capabilities of PLMs to comprehensively capture the semantics of short event texts. PromptCL utilizes a Prompt template borrowed from prompt learning to expand the input text during Contrastive Learning. This helps in enhancing the event representation learning by providing a structured outline of the event components. Moreover, we propose Subject-Predicate-Object (SPO) word order and Event-oriented Masked Language Modeling (EventMLM) to train PLMs to understand the relationships between event components. Our experimental results demonstrate that PromptCL outperforms state-of-the-art baselines on event related tasks. Additionally, we conduct a thorough analysis and demonstrate that using a prompt results in improved generalization capabilities for event representations. Our code will be available at https://github.com/YuboFeng2023/PromptCL.
We explored leveraging state-of-the-art deep learning, big data, and natural language processing to enhance the detection of vulnerable web server versions. Focusing on improving accuracy and specificity over rule-based systems, we conducted experiments by sending various ambiguous and non-standard HTTP requests to 4.77 million domains and capturing HTTP response status lines. We represented these status lines through training a BPE tokenizer and RoBERTa encoder for unsupervised masked language modeling. We then dimensionality reduced and concatenated encoded response lines to represent each domain's web server. A Random Forest and multilayer perceptron (MLP) classified these web servers, and achieved 0.94 and 0.96 macro F1-score, respectively, on detecting the five most popular origin web servers. The MLP achieved a weighted F1-score of 0.55 on classifying 347 major type and minor version pairs. Analysis indicates that our test cases are meaningful discriminants of web server types. Our approach demonstrates promise as a powerful and flexible alternative to rule-based systems.
Recent work on permutation-based model merging has shown impressive low- or zero-barrier mode connectivity between models from completely different initializations. However, this line of work has not yet extended to the Transformer architecture, despite its dominant popularity in the language domain. Therefore, in this work, we investigate the extent to which separate Transformer minima learn similar features, and propose a model merging technique to investigate the relationship between these minima in the loss landscape. The specifics of the architecture, like its residual connections, multi-headed attention, and discrete, sequential input, require specific interventions in order to compute model permutations that remain within the same functional equivalence class. In merging these models with our method, we consistently find lower loss barriers between minima compared to model averaging, across models trained on a masked-language modeling task or fine-tuned on a language understanding benchmark. Our results show that the minima of these models are less sharp and isolated than previously understood, and provide a basis for future work on merging separately trained Transformer models.
While (large) language models have significantly improved over the last years, they still struggle to sensibly process long sequences found, e.g., in books, due to the quadratic scaling of the underlying attention mechanism. To address this, we propose NextLevelBERT, a Masked Language Model operating not on tokens, but on higher-level semantic representations in the form of text embeddings. We pretrain NextLevelBERT to predict the vector representation of entire masked text chunks and evaluate the effectiveness of the resulting document vectors on three types of tasks: 1) Semantic Textual Similarity via zero-shot document embeddings, 2) Long document classification, 3) Multiple-choice question answering. We find that next-level Masked Language Modeling is an effective technique to tackle long-document use cases and can outperfor much larger embedding models as long as the required level of detail of semantic information is not too fine. Our models and code are publicly available online.
Ribosomally synthesized and post-translationally modified peptide (RiPP) biosynthetic enzymes often exhibit promiscuous substrate preferences that cannot be reduced to simple rules. Large language models are promising tools for predicting such peptide fitness landscapes. However, state-of-the-art protein language models are trained on relatively few peptide sequences. A previous study comprehensively profiled the peptide substrate preferences of LazBF (a two-component serine dehydratase) and LazDEF (a three-component azole synthetase) from the lactazole biosynthetic pathway. We demonstrated that masked language modeling of LazBF substrate preferences produced language model embeddings that improved downstream classification models of both LazBF and LazDEF substrates. Similarly, masked language modeling of LazDEF substrate preferences produced embeddings that improved the performance of classification models of both LazBF and LazDEF substrates. Our results suggest that the models learned functional forms that are transferable between distinct enzymatic transformations that act within the same biosynthetic pathway. Our transfer learning method improved performance and data efficiency in data-scarce scenarios. We then fine-tuned models on each data set and showed that the fine-tuned models provided interpretable insight that we anticipate will facilitate the design of substrate libraries that are compatible with desired RiPP biosynthetic pathways.
Innovative transformer-based language models produce contextually-aware token embeddings and have achieved state-of-the-art performance for a variety of natural language tasks, but have been shown to encode unwanted biases for downstream applications. In this paper, we evaluate the social biases encoded by transformers trained with the masked language modeling objective using proposed proxy functions within an iterative masking experiment to measure the quality of transformer models' predictions, and assess the preference of MLMs towards disadvantaged and advantaged groups. We compare bias estimations with those produced by other evaluation methods using benchmark datasets and assess their alignment with human annotated biases. We find relatively high religious and disability biases across considered MLMs and low gender bias in one dataset relative to another. We extend on previous work by evaluating social biases introduced after retraining an MLM under the masked language modeling objective, and find that proposed measures produce more accurate estimations of biases introduced by retraining MLMs than others based on relative preference for biased sentences between models.
Transformer based code models have impressive performance in many software engineering tasks. However, their effectiveness degrades when symbols are missing or not informative. The reason is that the model may not learn to pay attention to the right correlations/contexts without the help of symbols. We propose a new method to pre-train general code models when symbols are lacking. We observe that in such cases, programs degenerate to something written in a very primitive language. We hence propose to use program analysis to extract contexts a priori (instead of relying on symbols and masked language modeling as in vanilla models). We then leverage a novel attention masking method to only allow the model attending to these contexts, e.g., bi-directional program dependence transitive closures and token co-occurrences. In the meantime, the inherent self-attention mechanism is utilized to learn which of the allowed attentions are more important compared to others. To realize the idea, we enhance the vanilla tokenization and model architecture of a BERT model, construct and utilize attention masks, and introduce a new pre-training algorithm. We pre-train this BERT-like model from scratch, using a dataset of 26 million stripped binary functions with explicit program dependence information extracted by our tool. We apply the model in three downstream tasks: binary similarity, type inference, and malware family classification. Our pre-trained model can improve the SOTAs in these tasks from 53% to 64%, 49% to 60%, and 74% to 94%, respectively. It also substantially outperforms other general pre-training techniques of code understanding models.
Unsupervised learning objectives like autoregressive and masked language modeling constitute a significant part in producing pre-trained representations that perform various downstream applications from natural language understanding to conversational tasks. However, despite impressive generative capabilities of recent large language models, their abilities to capture syntactic or semantic structure within text lag behind. We hypothesize that the mismatch between linguistic performance and competence in machines is attributable to insufficient learning of linguistic structure knowledge via currently popular pre-training objectives. Working with English, we show that punctuation restoration as a learning objective improves performance on structure-related tasks like named entity recognition, open information extraction, chunking, and part-of-speech tagging. Punctuation restoration results in $\blacktriangle$$\geq2\%$p improvement in 16 out of 18 experiments, across 6 out of 7 tasks. Our results show that punctuation restoration is an effective learning objective that can improve structure understanding and yield a more robust structure-aware representations of natural language in base-sized models.
Text classification systems have been proven vulnerable to adversarial text examples, modified versions of the original text examples that are often unnoticed by human eyes, yet can force text classification models to alter their classification. Often, research works quantifying the impact of adversarial text attacks have been applied only to models trained in English. In this paper, we introduce the first word-level study of adversarial attacks in Arabic. Specifically, we use a synonym (word-level) attack using a Masked Language Modeling (MLM) task with a BERT model in a black-box setting to assess the robustness of the state-of-the-art text classification models to adversarial attacks in Arabic. To evaluate the grammatical and semantic similarities of the newly produced adversarial examples using our synonym BERT-based attack, we invite four human evaluators to assess and compare the produced adversarial examples with their original examples. We also study the transferability of these newly produced Arabic adversarial examples to various models and investigate the effectiveness of defense mechanisms against these adversarial examples on the BERT models. We find that fine-tuned BERT models were more susceptible to our synonym attacks than the other Deep Neural Networks (DNN) models like WordCNN and WordLSTM we trained. We also find that fine-tuned BERT models were more susceptible to transferred attacks. We, lastly, find that fine-tuned BERT models successfully regain at least 2% in accuracy after applying adversarial training as an initial defense mechanism.