Foundation models have excelled in various tasks but are often evaluated on general benchmarks. The adaptation of these models for specific domains, such as remote sensing imagery, remains an underexplored area. In remote sensing, precise building instance segmentation is vital for applications like urban planning. While Convolutional Neural Networks (CNNs) perform well, their generalization can be limited. For this aim, we present a novel approach to adapt foundation models to address existing models' generalization dropback. Among several models, our focus centers on the Segment Anything Model (SAM), a potent foundation model renowned for its prowess in class-agnostic image segmentation capabilities. We start by identifying the limitations of SAM, revealing its suboptimal performance when applied to remote sensing imagery. Moreover, SAM does not offer recognition abilities and thus fails to classify and tag localized objects. To address these limitations, we introduce different prompting strategies, including integrating a pre-trained CNN as a prompt generator. This novel approach augments SAM with recognition abilities, a first of its kind. We evaluated our method on three remote sensing datasets, including the WHU Buildings dataset, the Massachusetts Buildings dataset, and the AICrowd Mapping Challenge. For out-of-distribution performance on the WHU dataset, we achieve a 5.47\% increase in IoU and a 4.81\% improvement in F1-score. For in-distribution performance on the WHU dataset, we observe a 2.72\% and 1.58\% increase in True-Positive-IoU and True-Positive-F1 score, respectively. Our code is publicly available at this Repo (https://github.com/geoaigroup/GEOAI-ECRS2023), hoping to inspire further exploration of foundation models for domain-specific tasks within the remote sensing community.
As the size of accessible compound libraries expands to over 10 billion, the need for more efficient structure-based virtual screening methods is emerging. Different pre-screening methods have been developed for rapid screening, but there is still a lack of structure-based methods applicable to various proteins that perform protein-ligand binding conformation prediction and scoring in an extremely short time. Here, we describe for the first time a deep-learning framework for structure-based pharmacophore modeling to address this challenge. We frame pharmacophore modeling as an instance segmentation problem to determine each protein hotspot and the location of corresponding pharmacophores, and protein-ligand binding pose prediction as a graph-matching problem. PharmacoNet is significantly faster than state-of-the-art structure-based approaches, yet reasonably accurate with a simple scoring function. Furthermore, we show the promising result that PharmacoNet effectively retains hit candidates even under the high pre-screening filtration rates. Overall, our study uncovers the hitherto untapped potential of a pharmacophore modeling approach in deep learning-based drug discovery.
We present Contextualized Local Visual Embeddings (CLoVE), a self-supervised convolutional-based method that learns representations suited for dense prediction tasks. CLoVE deviates from current methods and optimizes a single loss function that operates at the level of contextualized local embeddings learned from output feature maps of convolution neural network (CNN) encoders. To learn contextualized embeddings, CLoVE proposes a normalized mult-head self-attention layer that combines local features from different parts of an image based on similarity. We extensively benchmark CLoVE's pre-trained representations on multiple datasets. CLoVE reaches state-of-the-art performance for CNN-based architectures in 4 dense prediction downstream tasks, including object detection, instance segmentation, keypoint detection, and dense pose estimation.
Multi-task learning (MTL) aims to learn multiple tasks using a single model and jointly improve all of them assuming generalization and shared semantics. Reducing conflicts between tasks during joint learning is difficult and generally requires careful network design and extremely large models. We propose building on You Only Learn One Representation (YOLOR), a network architecture specifically designed for multitasking. YOLOR leverages both explicit and implicit knowledge, from data observations and learned latents, respectively, to improve a shared representation while minimizing the number of training parameters. However, YOLOR and its follow-up, YOLOv7, only trained two tasks at once. In this paper, we jointly train object detection, instance segmentation, semantic segmentation, and image captioning. We analyze tradeoffs and attempt to maximize sharing of semantic information. Through our architecture and training strategies, we find that our method achieves competitive performance on all tasks while maintaining a low parameter count and without any pre-training. We will release code soon.
Accurately perceiving and tracking instances over time is essential for the decision-making processes of autonomous agents interacting safely in dynamic environments. With this intention, we propose Mask4Former for the challenging task of 4D panoptic segmentation of LiDAR point clouds. Mask4Former is the first transformer-based approach unifying semantic instance segmentation and tracking of sparse and irregular sequences of 3D point clouds into a single joint model. Our model directly predicts semantic instances and their temporal associations without relying on hand-crafted non-learned association strategies such as probabilistic clustering or voting-based center prediction. Instead, Mask4Former introduces spatio-temporal instance queries that encode the semantic and geometric properties of each semantic tracklet in the sequence. In an in-depth study, we find that promoting spatially compact instance predictions is critical as spatio-temporal instance queries tend to merge multiple semantically similar instances, even if they are spatially distant. To this end, we regress 6-DOF bounding box parameters from spatio-temporal instance queries, which are used as an auxiliary task to foster spatially compact predictions. Mask4Former achieves a new state-of-the-art on the SemanticKITTI test set with a score of 68.4 LSTQ.
Combining the strengths of many existing predictors to obtain a Mixture of Experts which is superior to its individual components is an effective way to improve the performance without having to develop new architectures or train a model from scratch. However, surprisingly, we find that na\"ively combining expert object detectors in a similar way to Deep Ensembles, can often lead to degraded performance. We identify that the primary cause of this issue is that the predictions of the experts do not match their performance, a term referred to as miscalibration. Consequently, the most confident detector dominates the final predictions, preventing the mixture from leveraging all the predictions from the experts appropriately. To address this, when constructing the Mixture of Experts, we propose to combine their predictions in a manner which reflects the individual performance of the experts; an objective we achieve by first calibrating the predictions before filtering and refining them. We term this approach the Mixture of Calibrated Experts and demonstrate its effectiveness through extensive experiments on 5 different detection tasks using a variety of detectors, showing that it: (i) improves object detectors on COCO and instance segmentation methods on LVIS by up to $\sim 2.5$ AP; (ii) reaches state-of-the-art on COCO test-dev with $65.1$ AP and on DOTA with $82.62$ $\mathrm{AP_{50}}$; (iii) outperforms single models consistently on recent detection tasks such as Open Vocabulary Object Detection.
This paper presents CLUSTERFORMER, a universal vision model that is based on the CLUSTERing paradigm with TransFORMER. It comprises two novel designs: 1. recurrent cross-attention clustering, which reformulates the cross-attention mechanism in Transformer and enables recursive updates of cluster centers to facilitate strong representation learning; and 2. feature dispatching, which uses the updated cluster centers to redistribute image features through similarity-based metrics, resulting in a transparent pipeline. This elegant design streamlines an explainable and transferable workflow, capable of tackling heterogeneous vision tasks (i.e., image classification, object detection, and image segmentation) with varying levels of clustering granularity (i.e., image-, box-, and pixel-level). Empirical results demonstrate that CLUSTERFORMER outperforms various well-known specialized architectures, achieving 83.41% top-1 acc. over ImageNet-1K for image classification, 54.2% and 47.0% mAP over MS COCO for object detection and instance segmentation, 52.4% mIoU over ADE20K for semantic segmentation, and 55.8% PQ over COCO Panoptic for panoptic segmentation. For its efficacy, we hope our work can catalyze a paradigm shift in universal models in computer vision.
We present MosaicFusion, a simple yet effective diffusion-based data augmentation approach for large vocabulary instance segmentation. Our method is training-free and does not rely on any label supervision. Two key designs enable us to employ an off-the-shelf text-to-image diffusion model as a useful dataset generator for object instances and mask annotations. First, we divide an image canvas into several regions and perform a single round of diffusion process to generate multiple instances simultaneously, conditioning on different text prompts. Second, we obtain corresponding instance masks by aggregating cross-attention maps associated with object prompts across layers and diffusion time steps, followed by simple thresholding and edge-aware refinement processing. Without bells and whistles, our MosaicFusion can produce a significant amount of synthetic labeled data for both rare and novel categories. Experimental results on the challenging LVIS long-tailed and open-vocabulary benchmarks demonstrate that MosaicFusion can significantly improve the performance of existing instance segmentation models, especially for rare and novel categories. Code: https://github.com/Jiahao000/MosaicFusion.
We present NeuralLabeling, a labeling approach and toolset for annotating 3D scenes using either bounding boxes or meshes and generating segmentation masks, affordance maps, 2D bounding boxes, 3D bounding boxes, 6DOF object poses, depth maps, and object meshes. NeuralLabeling uses Neural Radiance Fields (NeRF) as a renderer, allowing labeling to be performed using 3D spatial tools while incorporating geometric clues such as occlusions, relying only on images captured from multiple viewpoints as input. To demonstrate the applicability of NeuralLabeling to a practical problem in robotics, we added ground truth depth maps to 30000 frames of transparent object RGB and noisy depth maps of glasses placed in a dishwasher captured using an RGBD sensor, yielding the Dishwasher30k dataset. We show that training a simple deep neural network with supervision using the annotated depth maps yields a higher reconstruction performance than training with the previously applied weakly supervised approach. We also show how instance segmentation and depth completion datasets generated using NeuralLabeling can be incorporated into a robot application for grasping transparent objects placed in a dishwasher with an accuracy of 83.3%, compared to 16.3% without depth completion.
In recent years, significant progress has been made in video instance segmentation (VIS), with many offline and online methods achieving state-of-the-art performance. While offline methods have the advantage of producing temporally consistent predictions, they are not suitable for real-time scenarios. Conversely, online methods are more practical, but maintaining temporal consistency remains a challenging task. In this paper, we propose a novel online method for video instance segmentation, called TCOVIS, which fully exploits the temporal information in a video clip. The core of our method consists of a global instance assignment strategy and a spatio-temporal enhancement module, which improve the temporal consistency of the features from two aspects. Specifically, we perform global optimal matching between the predictions and ground truth across the whole video clip, and supervise the model with the global optimal objective. We also capture the spatial feature and aggregate it with the semantic feature between frames, thus realizing the spatio-temporal enhancement. We evaluate our method on four widely adopted VIS benchmarks, namely YouTube-VIS 2019/2021/2022 and OVIS, and achieve state-of-the-art performance on all benchmarks without bells-and-whistles. For instance, on YouTube-VIS 2021, TCOVIS achieves 49.5 AP and 61.3 AP with ResNet-50 and Swin-L backbones, respectively. Code is available at https://github.com/jun-long-li/TCOVIS.
Vision Transformer (ViT) has gained increasing attention in the computer vision community in recent years. However, the core component of ViT, Self-Attention, lacks explicit spatial priors and bears a quadratic computational complexity, thereby constraining the applicability of ViT. To alleviate these issues, we draw inspiration from the recent Retentive Network (RetNet) in the field of NLP, and propose RMT, a strong vision backbone with explicit spatial prior for general purposes. Specifically, we extend the RetNet's temporal decay mechanism to the spatial domain, and propose a spatial decay matrix based on the Manhattan distance to introduce the explicit spatial prior to Self-Attention. Additionally, an attention decomposition form that adeptly adapts to explicit spatial prior is proposed, aiming to reduce the computational burden of modeling global information without disrupting the spatial decay matrix. Based on the spatial decay matrix and the attention decomposition form, we can flexibly integrate explicit spatial prior into the vision backbone with linear complexity. Extensive experiments demonstrate that RMT exhibits exceptional performance across various vision tasks. Specifically, without extra training data, RMT achieves **84.8%** and **86.1%** top-1 acc on ImageNet-1k with **27M/4.5GFLOPs** and **96M/18.2GFLOPs**. For downstream tasks, RMT achieves **54.5** box AP and **47.2** mask AP on the COCO detection task, and **52.8** mIoU on the ADE20K semantic segmentation task. Code is available at https://github.com/qhfan/RMT
Developing algorithms for extra-terrestrial robotic exploration has always been challenging. Along with the complexity associated with these environments, one of the main issues remains the evaluation of said algorithms. With the regained interest in lunar exploration, there is also a demand for quality simulators that will enable the development of lunar robots. % In this paper, we explain how we built a Lunar simulator based on Isaac Sim, Nvidia's robotic simulator. In this paper, we propose Omniverse Lunar Robotic-Sim (OmniLRS) that is a photorealistic Lunar simulator based on Nvidia's robotic simulator. This simulation provides fast procedural environment generation, multi-robot capabilities, along with synthetic data pipeline for machine-learning applications. It comes with ROS1 and ROS2 bindings to control not only the robots, but also the environments. This work also performs sim-to-real rock instance segmentation to show the effectiveness of our simulator for image-based perception. Trained on our synthetic data, a yolov8 model achieves performance close to a model trained on real-world data, with 5% performance gap. When finetuned with real data, the model achieves 14% higher average precision than the model trained on real-world data, demonstrating our simulator's photorealism.% to realize sim-to-real. The code is fully open-source, accessible here: https://github.com/AntoineRichard/LunarSim, and comes with demonstrations.
The reliability of supervised machine learning systems depends on the accuracy and availability of ground truth labels. However, the process of human annotation, being prone to error, introduces the potential for noisy labels, which can impede the practicality of these systems. While training with noisy labels is a significant consideration, the reliability of test data is also crucial to ascertain the dependability of the results. A common approach to addressing this issue is repeated labeling, where multiple annotators label the same example, and their labels are combined to provide a better estimate of the true label. In this paper, we propose a novel localization algorithm that adapts well-established ground truth estimation methods for object detection and instance segmentation tasks. The key innovation of our method lies in its ability to transform combined localization and classification tasks into classification-only problems, thus enabling the application of techniques such as Expectation-Maximization (EM) or Majority Voting (MJV). Although our main focus is the aggregation of unique ground truth for test data, our algorithm also shows superior performance during training on the TexBiG dataset, surpassing both noisy label training and label aggregation using Weighted Boxes Fusion (WBF). Our experiments indicate that the benefits of repeated labels emerge under specific dataset and annotation configurations. The key factors appear to be (1) dataset complexity, the (2) annotator consistency, and (3) the given annotation budget constraints.
Laser-scanned point clouds of forests make it possible to extract valuable information for forest management. To consider single trees, a forest point cloud needs to be segmented into individual tree point clouds. Existing segmentation methods are usually based on hand-crafted algorithms, such as identifying trunks and growing trees from them, and face difficulties in dense forests with overlapping tree crowns. In this study, we propose TreeLearn, a deep learning-based approach for tree instance segmentation of forest point clouds. TreeLearn is trained on already segmented point clouds in a data-driven manner, making it less reliant on predefined features and algorithms. Furthermore, TreeLearn is implemented as a fully automatic pipeline and does not rely on extensive hyperparameter tuning, which makes it easy to use. Additionally, we introduce a new manually segmented benchmark forest dataset containing 156 full trees. The data is generated by mobile laser scanning and contributes to create a larger and more diverse data basis for model development and fine-grained instance segmentation evaluation. We trained TreeLearn on forest point clouds of 6665 trees, labeled using the Lidar360 software. An evaluation on the benchmark dataset shows that TreeLearn performs as well as the algorithm used to generate its training data. Furthermore, the performance can be vastly improved by fine-tuning the model using manually annotated datasets. We evaluate TreeLearn on our benchmark dataset and the Wytham Woods dataset, outperforming the recent SegmentAnyTree, ForAINet and TLS2Trees methods. The TreeLearn code and all datasets that were created in the course of this work are made publicly available.
Segmentation of planar regions from a single RGB image is a particularly important task in the perception of complex scenes. To utilize both visual and geometric properties in images, recent approaches often formulate the problem as a joint estimation of planar instances and dense depth through feature fusion mechanisms and geometric constraint losses. Despite promising results, these methods do not consider cross-task feature distillation and perform poorly in boundary regions. To overcome these limitations, we propose X-PDNet, a framework for the multitask learning of plane instance segmentation and depth estimation with improvements in the following two aspects. Firstly, we construct the cross-task distillation design which promotes early information sharing between dual-tasks for specific task improvements. Secondly, we highlight the current limitations of using the ground truth boundary to develop boundary regression loss, and propose a novel method that exploits depth information to support precise boundary region segmentation. Finally, we manually annotate more than 3000 images from Stanford 2D-3D-Semantics dataset and make available for evaluation of plane instance segmentation. Through the experiments, our proposed methods prove the advantages, outperforming the baseline with large improvement margins in the quantitative results on the ScanNet and the Stanford 2D-3D-S dataset, demonstrating the effectiveness of our proposals.
Self-supervised pretraining attempts to enhance model performance by obtaining effective features from unlabeled data, and has demonstrated its effectiveness in the field of histopathology images. Despite its success, few works concentrate on the extraction of nucleus-level information, which is essential for pathologic analysis. In this work, we propose a novel nucleus-aware self-supervised pretraining framework for histopathology images. The framework aims to capture the nuclear morphology and distribution information through unpaired image-to-image translation between histopathology images and pseudo mask images. The generation process is modulated by both conditional and stochastic style representations, ensuring the reality and diversity of the generated histopathology images for pretraining. Further, an instance segmentation guided strategy is employed to capture instance-level information. The experiments on 7 datasets show that the proposed pretraining method outperforms supervised ones on Kather classification, multiple instance learning, and 5 dense-prediction tasks with the transfer learning protocol, and yields superior results than other self-supervised approaches on 8 semi-supervised tasks. Our project is publicly available at https://github.com/zhiyuns/UNITPathSSL.
Designing metrics for evaluating instance segmentation revolves around comprehensively considering object detection and segmentation accuracy. However, other important properties, such as sensitivity, continuity, and equality, are overlooked in the current study. In this paper, we reveal that most existing metrics have a limited resolution of segmentation quality. They are only conditionally sensitive to the change of masks or false predictions. For certain metrics, the score can change drastically in a narrow range which could provide a misleading indication of the quality gap between results. Therefore, we propose a new metric called sortedAP, which strictly decreases with both object- and pixel-level imperfections and has an uninterrupted penalization scale over the entire domain. We provide the evaluation toolkit and experiment code at https://www.github.com/looooongChen/sortedAP.
This paper introduces the first two pixel retrieval benchmarks. Pixel retrieval is segmented instance retrieval. Like semantic segmentation extends classification to the pixel level, pixel retrieval is an extension of image retrieval and offers information about which pixels are related to the query object. In addition to retrieving images for the given query, it helps users quickly identify the query object in true positive images and exclude false positive images by denoting the correlated pixels. Our user study results show pixel-level annotation can significantly improve the user experience. Compared with semantic and instance segmentation, pixel retrieval requires a fine-grained recognition capability for variable-granularity targets. To this end, we propose pixel retrieval benchmarks named PROxford and PRParis, which are based on the widely used image retrieval datasets, ROxford and RParis. Three professional annotators label 5,942 images with two rounds of double-checking and refinement. Furthermore, we conduct extensive experiments and analysis on the SOTA methods in image search, image matching, detection, segmentation, and dense matching using our pixel retrieval benchmarks. Results show that the pixel retrieval task is challenging to these approaches and distinctive from existing problems, suggesting that further research can advance the content-based pixel-retrieval and thus user search experience. The datasets can be downloaded from \href{https://github.com/anguoyuan/Pixel_retrieval-Segmented_instance_retrieval}{this link}.
Recently, methods have been proposed for 3D open-vocabulary semantic segmentation. Such methods are able to segment scenes into arbitrary classes based on text descriptions provided during runtime. In this paper, we propose to the best of our knowledge the first algorithm for open-vocabulary panoptic segmentation in 3D scenes. Our algorithm, Panoptic Vision-Language Feature Fields (PVLFF), learns a semantic feature field of the scene by distilling vision-language features from a pretrained 2D model, and jointly fits an instance feature field through contrastive learning using 2D instance segments on input frames. Despite not being trained on the target classes, our method achieves panoptic segmentation performance similar to the state-of-the-art closed-set 3D systems on the HyperSim, ScanNet and Replica dataset and additionally outperforms current 3D open-vocabulary systems in terms of semantic segmentation. We ablate the components of our method to demonstrate the effectiveness of our model architecture. Our code will be available at https://github.com/ethz-asl/pvlff.
Recently, transformer-based methods have dominated 3D instance segmentation, where mask attention is commonly involved. Specifically, object queries are guided by the initial instance masks in the first cross-attention, and then iteratively refine themselves in a similar manner. However, we observe that the mask-attention pipeline usually leads to slow convergence due to low-recall initial instance masks. Therefore, we abandon the mask attention design and resort to an auxiliary center regression task instead. Through center regression, we effectively overcome the low-recall issue and perform cross-attention by imposing positional prior. To reach this goal, we develop a series of position-aware designs. First, we learn a spatial distribution of 3D locations as the initial position queries. They spread over the 3D space densely, and thus can easily capture the objects in a scene with a high recall. Moreover, we present relative position encoding for the cross-attention and iterative refinement for more accurate position queries. Experiments show that our approach converges 4x faster than existing work, sets a new state of the art on ScanNetv2 3D instance segmentation benchmark, and also demonstrates superior performance across various datasets. Code and models are available at https://github.com/dvlab-research/Mask-Attention-Free-Transformer.