While text-based event extraction has been an active research area and has seen successful application in many domains, extracting semantic events from speech directly is an under-explored problem. In this paper, we introduce the Speech Event Extraction (SpeechEE) task and construct three synthetic training sets and one human-spoken test set. Compared to event extraction from text, SpeechEE poses greater challenges mainly due to complex speech signals that are continuous and have no word boundaries. Additionally, unlike perceptible sound events, semantic events are more subtle and require a deeper understanding. To tackle these challenges, we introduce a sequence-to-structure generation paradigm that can produce events from speech signals in an end-to-end manner, together with a conditioned generation method that utilizes speech recognition transcripts as the contextual clue. We further propose to represent events with a flat format to make outputs more natural language-like. Our experimental results show that our method brings significant improvements on all datasets, achieving a maximum F1 gain of 10.7%. The code and datasets are released on https://github.com/jodie-kang/SpeechEE.
Operating rooms (ORs) are complex, high-stakes environments requiring precise understanding of interactions among medical staff, tools, and equipment for enhancing surgical assistance, situational awareness, and patient safety. Current datasets fall short in scale, realism and do not capture the multimodal nature of OR scenes, limiting progress in OR modeling. To this end, we introduce MM-OR, a realistic and large-scale multimodal spatiotemporal OR dataset, and the first dataset to enable multimodal scene graph generation. MM-OR captures comprehensive OR scenes containing RGB-D data, detail views, audio, speech transcripts, robotic logs, and tracking data and is annotated with panoptic segmentations, semantic scene graphs, and downstream task labels. Further, we propose MM2SG, the first multimodal large vision-language model for scene graph generation, and through extensive experiments, demonstrate its ability to effectively leverage multimodal inputs. Together, MM-OR and MM2SG establish a new benchmark for holistic OR understanding, and open the path towards multimodal scene analysis in complex, high-stakes environments. Our code, and data is available at https://github.com/egeozsoy/MM-OR.
Structural biology relies on accurate three-dimensional biomolecular structures to advance our understanding of biological functions, disease mechanisms, and therapeutics. While recent advances in deep learning have enabled the development of all-atom foundation models for molecular modeling and generation, existing approaches face challenges in generalization due to the multi-modal nature of atomic data and the lack of comprehensive analysis of training and sampling strategies. To address these limitations, we propose PharMolixFM, a unified framework for constructing all-atom foundation models based on multi-modal generative techniques. Our framework includes three variants using state-of-the-art multi-modal generative models. By formulating molecular tasks as a generalized denoising process with task-specific priors, PharMolixFM achieves robust performance across various structural biology applications. Experimental results demonstrate that PharMolixFM-Diff achieves competitive prediction accuracy in protein-small-molecule docking (83.9% vs. 90.2% RMSD < 2{\AA}, given pocket) with significantly improved inference speed. Moreover, we explore the empirical inference scaling law by introducing more sampling repeats or steps. Our code and model are available at https://github.com/PharMolix/OpenBioMed.
Boundary representation (B-rep) of geometric models is a fundamental format in Computer-Aided Design (CAD). However, automatically generating valid and high-quality B-rep models remains challenging due to the complex interdependence between the topology and geometry of the models. Existing methods tend to prioritize geometric representation while giving insufficient attention to topological constraints, making it difficult to maintain structural validity and geometric accuracy. In this paper, we propose DTGBrepGen, a novel topology-geometry decoupled framework for B-rep generation that explicitly addresses both aspects. Our approach first generates valid topological structures through a two-stage process that independently models edge-face and edge-vertex adjacency relationships. Subsequently, we employ Transformer-based diffusion models for sequential geometry generation, progressively generating vertex coordinates, followed by edge geometries and face geometries which are represented as B-splines. Extensive experiments on diverse CAD datasets show that DTGBrepGen significantly outperforms existing methods in both topological validity and geometric accuracy, achieving higher validity rates and producing more diverse and realistic B-reps. Our code is publicly available at https://github.com/jinli99/DTGBrepGen.
Large language models (LLMs) have demonstrated strong capabilities in translating natural language questions about relational databases into SQL queries. In particular, test-time scaling techniques such as Self-Consistency and Self-Correction can enhance SQL generation accuracy by increasing computational effort during inference. However, these methods have notable limitations: Self-Consistency may select suboptimal outputs despite majority votes, while Self-Correction typically addresses only syntactic errors. To leverage the strengths of both approaches, we propose CSC-SQL, a novel method that integrates Self-Consistency and Self-Correction. CSC-SQL selects the two most frequently occurring outputs from parallel sampling and feeds them into a merge revision model for correction. Additionally, we employ the Group Relative Policy Optimization (GRPO) algorithm to fine-tune both the SQL generation and revision models via reinforcement learning, significantly enhancing output quality. Experimental results confirm the effectiveness and generalizability of CSC-SQL. On the BIRD development set, our 3B model achieves 65.28% execution accuracy, while the 7B model achieves 69.19%. The code will be open sourced at https://github.com/CycloneBoy/csc_sql.
Spatial control methods using additional modules on pretrained diffusion models have gained attention for enabling conditional generation in natural images. These methods guide the generation process with new conditions while leveraging the capabilities of large models. They could be beneficial as training strategies in the context of 3D medical imaging, where training a diffusion model from scratch is challenging due to high computational costs and data scarcity. However, the potential application of spatial control methods with additional modules to 3D medical images has not yet been explored. In this paper, we present a tailored spatial control method for 3D medical images with a novel lightweight module, Volumetric Conditioning Module (VCM). Our VCM employs an asymmetric U-Net architecture to effectively encode complex information from various levels of 3D conditions, providing detailed guidance in image synthesis. To examine the applicability of spatial control methods and the effectiveness of VCM for 3D medical data, we conduct experiments under single- and multimodal conditions scenarios across a wide range of dataset sizes, from extremely small datasets with 10 samples to large datasets with 500 samples. The experimental results show that the VCM is effective for conditional generation and efficient in terms of requiring less training data and computational resources. We further investigate the potential applications for our spatial control method through axial super-resolution for medical images. Our code is available at \url{https://github.com/Ahn-Ssu/VCM}
Forecasting the evolution of 3D scenes and generating unseen scenarios via occupancy-based world models offers substantial potential for addressing corner cases in autonomous driving systems. While tokenization has revolutionized image and video generation, efficiently tokenizing complex 3D scenes remains a critical challenge for 3D world models. To address this, we propose $I^{2}$-World, an efficient framework for 4D occupancy forecasting. Our method decouples scene tokenization into intra-scene and inter-scene tokenizers. The intra-scene tokenizer employs a multi-scale residual quantization strategy to hierarchically compress 3D scenes while preserving spatial details. The inter-scene tokenizer residually aggregates temporal dependencies across timesteps. This dual design preserves the compactness of 3D tokenizers while retaining the dynamic expressiveness of 4D tokenizers. Unlike decoder-only GPT-style autoregressive models, $I^{2}$-World adopts an encoder-decoder architecture. The encoder aggregates spatial context from the current scene and predicts a transformation matrix to enable high-level control over scene generation. The decoder, conditioned on this matrix and historical tokens, ensures temporal consistency during generation. Experiments demonstrate that $I^{2}$-World achieves state-of-the-art performance, outperforming existing methods by 25.1\% in mIoU and 36.9\% in IoU for 4D occupancy forecasting while exhibiting exceptional computational efficiency: it requires merely 2.9 GB of training memory and achieves real-time inference at 37.0 FPS. Our code is available on https://github.com/lzzzzzm/II-World.
Intelligent tutoring agents powered by large language models (LLMs) have been increasingly explored to deliver personalized guidance in areas such as language learning and science education. However, their capabilities in guiding users to solve complex real-world tasks remain underexplored. To address this limitation, in this work, we focus on coding tutoring, a challenging problem that requires tutors to proactively guide students toward completing predefined coding tasks. We propose a novel agent workflow, Trace-and-Verify (TRAVER), which combines knowledge tracing to estimate a student's knowledge state and turn-by-turn verification to ensure effective guidance toward task completion. We introduce DICT, an automatic evaluation protocol that assesses tutor agents holistically using controlled student simulation and code generation tests. Extensive experiments reveal the challenges of coding tutoring and demonstrate that TRAVER achieves a significantly higher success rate. Although we use code tutoring as an example in this paper, our results and findings can be extended beyond coding, providing valuable insights into advancing tutoring agents for a variety of tasks.
The performance of large language models (LLMs) in program synthesis and mathematical reasoning is fundamentally limited by the quality of their pre-training corpora. We introduce two openly licensed datasets, released under the Llama 3.3 Community License, that significantly enhance LLM performance by systematically rewriting public data. SwallowCode (approximately 16.1 billion tokens) refines Python snippets from The-Stack-v2 through a novel four-stage pipeline: syntax validation, pylint-based style filtering, and a two-stage LLM rewriting process that enforces style conformity and transforms snippets into self-contained, algorithmically efficient examples. Unlike prior methods that rely on exclusionary filtering or limited transformations, our transform-and-retain approach upgrades low-quality code, maximizing data utility. SwallowMath (approximately 2.3 billion tokens) enhances Finemath-4+ by removing boilerplate, restoring context, and reformatting solutions into concise, step-by-step explanations. Within a fixed 50 billion token training budget, continual pre-training of Llama-3.1-8B with SwallowCode boosts pass@1 by +17.0 on HumanEval and +17.7 on HumanEval+ compared to Stack-Edu, surpassing the baseline model's code generation capabilities. Similarly, substituting SwallowMath yields +12.4 accuracy on GSM8K and +7.6 on MATH. Ablation studies confirm that each pipeline stage contributes incrementally, with rewriting delivering the largest gains. All datasets, prompts, and checkpoints are publicly available, enabling reproducible research and advancing LLM pre-training for specialized domains.
Automated fact-checking systems often struggle with trustworthiness, as their generated explanations can include hallucinations. In this work, we explore evidence attribution for fact-checking explanation generation. We introduce a novel evaluation protocol, citation masking and recovery, to assess attribution quality in generated explanations. We implement our protocol using both human annotators and automatic annotators, and find that LLM annotation correlates with human annotation, suggesting that attribution assessment can be automated. Finally, our experiments reveal that: (1) the best-performing LLMs still generate explanations with inaccurate attributions; and (2) human-curated evidence is essential for generating better explanations. Code and data are available here: https://github.com/ruixing76/Transparent-FCExp.
The efficiency of attention is critical because its time complexity grows quadratically with sequence length. SageAttention2 addresses this by utilizing quantization to accelerate matrix multiplications (Matmul) in attention. To further accelerate SageAttention2, we propose to utilize the faster instruction of FP8 Matmul accumulated in FP16. The instruction is 2x faster than the FP8 Matmul used in SageAttention2. Our experiments show that SageAttention2++ achieves a 3.9x speedup over FlashAttention while maintaining the same attention accuracy as SageAttention2. This means SageAttention2++ effectively accelerates various models, including those for language, image, and video generation, with negligible end-to-end metrics loss. The code will be available at https://github.com/thu-ml/SageAttention.
Synthetic tabular data generation becomes crucial when real data is limited, expensive to collect, or simply cannot be used due to privacy concerns. However, producing good quality synthetic data is challenging. Several probabilistic, statistical, generative adversarial networks (GANs), and variational auto-encoder (VAEs) based approaches have been presented for synthetic tabular data generation. Once generated, evaluating the quality of the synthetic data is quite challenging. Some of the traditional metrics have been used in the literature but there is lack of a common, robust, and single metric. This makes it difficult to properly compare the effectiveness of different synthetic tabular data generation methods. In this paper we propose a new universal metric, TabSynDex, for robust evaluation of synthetic data. The proposed metric assesses the similarity of synthetic data with real data through different component scores which evaluate the characteristics that are desirable for ``high quality'' synthetic data. Being a single score metric and having an implicit bound, TabSynDex can also be used to observe and evaluate the training of neural network based approaches. This would help in obtaining insights that was not possible earlier. We present several baseline models for comparative analysis of the proposed evaluation metric with existing generative models. We also give a comparative analysis between TabSynDex and existing synthetic tabular data evaluation metrics. This shows the effectiveness and universality of our metric over the existing metrics. Source Code: \url{https://github.com/vikram2000b/tabsyndex}
Multi-sequence MRIs can be necessary for reliable diagnosis in clinical practice due to the complimentary information within sequences. However, redundant information exists across sequences, which interferes with mining efficient representations by modern machine learning or deep learning models. To handle various clinical scenarios, we propose a sequence-to-sequence generation framework (Seq2Seq) for imaging-differentiation representation learning. In this study, not only do we propose arbitrary 3D/4D sequence generation within one model to generate any specified target sequence, but also we are able to rank the importance of each sequence based on a new metric estimating the difficulty of a sequence being generated. Furthermore, we also exploit the generation inability of the model to extract regions that contain unique information for each sequence. We conduct extensive experiments using three datasets including a toy dataset of 20,000 simulated subjects, a brain MRI dataset of 1,251 subjects, and a breast MRI dataset of 2,101 subjects, to demonstrate that (1) our proposed Seq2Seq is efficient and lightweight for complex clinical datasets and can achieve excellent image quality; (2) top-ranking sequences can be used to replace complete sequences with non-inferior performance; (3) combining MRI with our imaging-differentiation map leads to better performance in clinical tasks such as glioblastoma MGMT promoter methylation status prediction and breast cancer pathological complete response status prediction. Our code is available at https://github.com/fiy2W/mri_seq2seq.
Zero-shot human-object interaction (HOI) detector is capable of generalizing to HOI categories even not encountered during training. Inspired by the impressive zero-shot capabilities offered by CLIP, latest methods strive to leverage CLIP embeddings for improving zero-shot HOI detection. However, these embedding-based methods train the classifier on seen classes only, inevitably resulting in seen-unseen confusion for the model during inference. Besides, we find that using prompt-tuning and adapters further increases the gap between seen and unseen accuracy. To tackle this challenge, we present the first generation-based model using CLIP for zero-shot HOI detection, coined HOIGen. It allows to unlock the potential of CLIP for feature generation instead of feature extraction only. To achieve it, we develop a CLIP-injected feature generator in accordance with the generation of human, object and union features. Then, we extract realistic features of seen samples and mix them with synthetic features together, allowing the model to train seen and unseen classes jointly. To enrich the HOI scores, we construct a generative prototype bank in a pairwise HOI recognition branch, and a multi-knowledge prototype bank in an image-wise HOI recognition branch, respectively. Extensive experiments on HICO-DET benchmark demonstrate our HOIGen achieves superior performance for both seen and unseen classes under various zero-shot settings, compared with other top-performing methods. Code is available at: https://github.com/soberguo/HOIGen
Millimeter-wave radar plays a vital role in 3D object detection for autonomous driving due to its all-weather and all-lighting-condition capabilities for perception. However, radar point clouds suffer from pronounced sparsity and unavoidable angle estimation errors. To address these limitations, incorporating a camera may partially help mitigate the shortcomings. Nevertheless, the direct fusion of radar and camera data can lead to negative or even opposite effects due to the lack of depth information in images and low-quality image features under adverse lighting conditions. Hence, in this paper, we present the radar-camera fusion network with Hybrid Generation and Synchronization (HGSFusion), designed to better fuse radar potentials and image features for 3D object detection. Specifically, we propose the Radar Hybrid Generation Module (RHGM), which fully considers the Direction-Of-Arrival (DOA) estimation errors in radar signal processing. This module generates denser radar points through different Probability Density Functions (PDFs) with the assistance of semantic information. Meanwhile, we introduce the Dual Sync Module (DSM), comprising spatial sync and modality sync, to enhance image features with radar positional information and facilitate the fusion of distinct characteristics in different modalities. Extensive experiments demonstrate the effectiveness of our approach, outperforming the state-of-the-art methods in the VoD and TJ4DRadSet datasets by $6.53\%$ and $2.03\%$ in RoI AP and BEV AP, respectively. The code is available at https://github.com/garfield-cpp/HGSFusion.
Traditional transformer-based semantic segmentation relies on quantized embeddings. However, our analysis reveals that autoencoder accuracy on segmentation mask using quantized embeddings (e.g. VQ-VAE) is 8% lower than continuous-valued embeddings (e.g. KL-VAE). Motivated by this, we propose a continuous-valued embedding framework for semantic segmentation. By reformulating semantic mask generation as a continuous image-to-embedding diffusion process, our approach eliminates the need for discrete latent representations while preserving fine-grained spatial and semantic details. Our key contribution includes a diffusion-guided autoregressive transformer that learns a continuous semantic embedding space by modeling long-range dependencies in image features. Our framework contains a unified architecture combining a VAE encoder for continuous feature extraction, a diffusion-guided transformer for conditioned embedding generation, and a VAE decoder for semantic mask reconstruction. Our setting facilitates zero-shot domain adaptation capabilities enabled by the continuity of the embedding space. Experiments across diverse datasets (e.g., Cityscapes and domain-shifted variants) demonstrate state-of-the-art robustness to distribution shifts, including adverse weather (e.g., fog, snow) and viewpoint variations. Our model also exhibits strong noise resilience, achieving robust performance ($\approx$ 95% AP compared to baseline) under gaussian noise, moderate motion blur, and moderate brightness/contrast variations, while experiencing only a moderate impact ($\approx$ 90% AP compared to baseline) from 50% salt and pepper noise, saturation and hue shifts. Code available: https://github.com/mahmed10/CAMSS.git
Biological protocols are fundamental to reproducible and safe life science research. While LLMs excel on general tasks, their systematic evaluation on these highly specialized, accuracy-critical, and inherently procedural texts remains limited. In this work, we present BioProBench, the first large-scale, integrated multi-task benchmark for biological protocol understanding and reasoning. While limited benchmarks have touched upon specific aspects like protocol QA, BioProBench provides a comprehensive suite of five core tasks: Protocol Question Answering, Step Ordering, Error Correction, Protocol Generation, and Protocol Reasoning, enabling a holistic evaluation of LLMs on procedural biological texts. Built upon 27K original protocols, it yields nearly 556K high-quality structured instances. We evaluate 12 mainstream open/closed-source LLMs on BioProBench. Experimental results reveal that while top models preform well on surface understanding tasks, struggle significantly with deep reasoning and structured generation tasks like ordering and generation. Furthermore, model comparisons reveal diverse performance: certain open-source models approach closed-source levels on some tasks, yet bio-specific small models lag behind general LLMs, indicating limitations on complex procedural content. Overall, our findings underscore that procedural reasoning within biological protocols represents a significant challenge for current LLMs. BioProBench serves as a standardized framework to diagnose these specific limitations and guide the development of AI systems better equipped for safely automating complex scientific procedures. The code and data are available at: https://github.com/YuyangSunshine/bioprotocolbench and https://huggingface.co/datasets/GreatCaptainNemo/BioProBench.
We introduce the task of acoustic question answering (AQA) in the area of acoustic reasoning. In this task an agent learns to answer questions on the basis of acoustic context. In order to promote research in this area, we propose a data generation paradigm adapted from CLEVR (Johnson et al. 2017). We generate acoustic scenes by leveraging a bank elementary sounds. We also provide a number of functional programs that can be used to compose questions and answers that exploit the relationships between the attributes of the elementary sounds in each scene. We provide AQA datasets of various sizes as well as the data generation code. As a preliminary experiment to validate our data, we report the accuracy of current state of the art visual question answering models when they are applied to the AQA task without modifications. Although there is a plethora of question answering tasks based on text, image or video data, to our knowledge, we are the first to propose answering questions directly on audio streams. We hope this contribution will facilitate the development of research in the area.
Much recent effort has been invested in non-autoregressive neural machine translation, which appears to be an efficient alternative to state-of-the-art autoregressive machine translation on modern GPUs. In contrast to the latter, where generation is sequential, the former allows generation to be parallelized across target token positions. Some of the latest non-autoregressive models have achieved impressive translation quality-speed tradeoffs compared to autoregressive baselines. In this work, we reexamine this tradeoff and argue that autoregressive baselines can be substantially sped up without loss in accuracy. Specifically, we study autoregressive models with encoders and decoders of varied depths. Our extensive experiments show that given a sufficiently deep encoder, a single-layer autoregressive decoder can substantially outperform strong non-autoregressive models with comparable inference speed. We show that the speed disadvantage for autoregressive baselines compared to non-autoregressive methods has been overestimated in three aspects: suboptimal layer allocation, insufficient speed measurement, and lack of knowledge distillation. Our results establish a new protocol for future research toward fast, accurate machine translation. Our code is available at https://github.com/jungokasai/deep-shallow.
In this work, we propose TediGAN, a novel framework for multi-modal image generation and manipulation with textual descriptions. The proposed method consists of three components: StyleGAN inversion module, visual-linguistic similarity learning, and instance-level optimization. The inversion module maps real images to the latent space of a well-trained StyleGAN. The visual-linguistic similarity learns the text-image matching by mapping the image and text into a common embedding space. The instance-level optimization is for identity preservation in manipulation. Our model can produce diverse and high-quality images with an unprecedented resolution at 1024. Using a control mechanism based on style-mixing, our TediGAN inherently supports image synthesis with multi-modal inputs, such as sketches or semantic labels, with or without instance guidance. To facilitate text-guided multi-modal synthesis, we propose the Multi-Modal CelebA-HQ, a large-scale dataset consisting of real face images and corresponding semantic segmentation map, sketch, and textual descriptions. Extensive experiments on the introduced dataset demonstrate the superior performance of our proposed method. Code and data are available at https://github.com/weihaox/TediGAN.